Definition Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome.
Accession NC_009053
Length 2,274,482

Click here to switch to the map view.

The map label for this gene is 126208291

Identifier: 126208291

GI number: 126208291

Start: 941783

End: 942118

Strand: Direct

Name: 126208291

Synonym: APL_0815

Alternate gene names: NA

Gene position: 941783-942118 (Clockwise)

Preceding gene: 126208290

Following gene: 126208293

Centisome position: 41.41

GC content: 39.29

Gene sequence:

>336_bases
ATGTCGAACCCTTTTACTGTCGCTTGGAGTCGTAAACAACAAGTTATGTGCTTAGGTCATTGGATTATTCATTACAATGG
TCGAGAACTTACCCTGCCTAAAGACCGTCAAGATAAAGATATGGGCACAAAAGGGATTTATAACTATATGGATCCGGATG
ATGAGCTTTACTTAGAAGGATTGGATGAAGATGATTGGATTGTAGAAAATATTGAATGGCTAAGCGATTGGTTTATCGAA
CAAGAGATTCCGTTAGAAGAAGAGATTATTCGCTATTTCTACCAAGCAGTAAATAAAGAAGACTGGCGTTGTGGCAGTTG
CGGAGGCTGTATCTAG

Upstream 100 bases:

>100_bases
TTTTGAACTAAATCAAACTCGTTCCAATTTACCCCATTTTTTGTATATCCCCCTATTTTCGTCAGTTTTAAAATTTTAAA
AAACGAATGGAGTATAAATT

Downstream 100 bases:

>100_bases
AAGCTAACAAGCGGTCAAAATTTGCAAATCTTTTGCAAAAATCAACCGCTTGTGTACGATGAGTAATTAGTTTAATACCC
AAACACGTCCGTAGTGTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MSNPFTVAWSRKQQVMCLGHWIIHYNGRELTLPKDRQDKDMGTKGIYNYMDPDDELYLEGLDEDDWIVENIEWLSDWFIE
QEIPLEEEIIRYFYQAVNKEDWRCGSCGGCI

Sequences:

>Translated_111_residues
MSNPFTVAWSRKQQVMCLGHWIIHYNGRELTLPKDRQDKDMGTKGIYNYMDPDDELYLEGLDEDDWIVENIEWLSDWFIE
QEIPLEEEIIRYFYQAVNKEDWRCGSCGGCI
>Mature_110_residues
SNPFTVAWSRKQQVMCLGHWIIHYNGRELTLPKDRQDKDMGTKGIYNYMDPDDELYLEGLDEDDWIVENIEWLSDWFIEQ
EIPLEEEIIRYFYQAVNKEDWRCGSCGGCI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13288; Mature: 13157

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNPFTVAWSRKQQVMCLGHWIIHYNGRELTLPKDRQDKDMGTKGIYNYMDPDDELYLEG
CCCCEEEEECCCCEEEEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEC
LDEDDWIVENIEWLSDWFIEQEIPLEEEIIRYFYQAVNKEDWRCGSCGGCI
CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SNPFTVAWSRKQQVMCLGHWIIHYNGRELTLPKDRQDKDMGTKGIYNYMDPDDELYLEG
CCCEEEEECCCCEEEEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEC
LDEDDWIVENIEWLSDWFIEQEIPLEEEIIRYFYQAVNKEDWRCGSCGGCI
CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]