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The map label for this gene is ybaB [C]

Identifier: 126207563

GI number: 126207563

Start: 86403

End: 86732

Strand: Reverse

Name: ybaB [C]

Synonym: APL_0075

Alternate gene names: 126207563

Gene position: 86732-86403 (Counterclockwise)

Preceding gene: 126207564

Following gene: 126207562

Centisome position: 3.81

GC content: 46.97

Gene sequence:

>330_bases
ATGTTTGGAAAAGGCGGCTTAGGCGGTTTAATGAAACAAGCTCAGCAAATGCAAGAGCGTATGCAGAAAATGCAAGAAGA
AATCGCACAGCTTGAAGTCACCGGCGAATCCGGTGCGGGTTTAGTCAAAGTAACGATCAATGGCGCACATAATTGTCGTC
GTATCGAAATCGATCCGTCATTAATGGAAGACGATAAAGAGATGGTGGAAGATTTAGTCGCCGCCGCATTCAATGATGCC
GTTCGCCGTGCGGAAGAAATGCAAAAAGAAAAAATGGCAAGCGTGACCGCCGGCATGCAATTACCGCCGGGCATGAAATT
CCCATTCTAA

Upstream 100 bases:

>100_bases
TGTTGCAAAAAATCGACAAAAGATAACCGCTTGCCTAAAGCGGAGTGCTTAAGTAAAATAAACTGTTTCTATTTTTATTA
TACAAATTGAGGAAAATATA

Downstream 100 bases:

>100_bases
TTTAGCGATAATGGATAGTTCGCTTTATTGCGGCTATCCATTATTAATTTTCAACTATCCGTTTCTATTTATGCAAATTA
GCCCTTTACTCGAAAATCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MFGKGGLGGLMKQAQQMQERMQKMQEEIAQLEVTGESGAGLVKVTINGAHNCRRIEIDPSLMEDDKEMVEDLVAAAFNDA
VRRAEEMQKEKMASVTAGMQLPPGMKFPF

Sequences:

>Translated_109_residues
MFGKGGLGGLMKQAQQMQERMQKMQEEIAQLEVTGESGAGLVKVTINGAHNCRRIEIDPSLMEDDKEMVEDLVAAAFNDA
VRRAEEMQKEKMASVTAGMQLPPGMKFPF
>Mature_109_residues
MFGKGGLGGLMKQAQQMQERMQKMQEEIAQLEVTGESGAGLVKVTINGAHNCRRIEIDPSLMEDDKEMVEDLVAAAFNDA
VRRAEEMQKEKMASVTAGMQLPPGMKFPF

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family

Homologues:

Organism=Escherichia coli, GI1786677, Length=109, Percent_Identity=88.9908256880734, Blast_Score=201, Evalue=6e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y075_ACTP2 (A3MYE7)

Other databases:

- EMBL:   CP000569
- RefSeq:   YP_001052788.1
- ProteinModelPortal:   A3MYE7
- SMR:   A3MYE7
- STRING:   A3MYE7
- GeneID:   4849372
- GenomeReviews:   CP000569_GR
- KEGG:   apl:APL_0075
- eggNOG:   COG0718
- HOGENOM:   HBG734215
- OMA:   MLQDLIL
- PhylomeDB:   A3MYE7
- ProtClustDB:   PRK00153
- BioCyc:   APLE416269:APL_0075-MONOMER
- HAMAP:   MF_00274
- InterPro:   IPR004401
- Gene3D:   G3DSA:3.30.1310.10
- PIRSF:   PIRSF004555
- TIGRFAMs:   TIGR00103

Pfam domain/function: PF02575 DUF149; SSF82607 CHP00103

EC number: NA

Molecular weight: Translated: 12018; Mature: 12018

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
10.1 %Met     (Translated Protein)
11.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
10.1 %Met     (Mature Protein)
11.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGKGGLGGLMKQAQQMQERMQKMQEEIAQLEVTGESGAGLVKVTINGAHNCRRIEIDPS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEECCCCCCEEEEECHH
LMEDDKEMVEDLVAAAFNDAVRRAEEMQKEKMASVTAGMQLPPGMKFPF
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MFGKGGLGGLMKQAQQMQERMQKMQEEIAQLEVTGESGAGLVKVTINGAHNCRRIEIDPS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEECCCCCCEEEEECHH
LMEDDKEMVEDLVAAAFNDAVRRAEEMQKEKMASVTAGMQLPPGMKFPF
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA