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The map label for this gene is tonB2 [H]

Identifier: 126207564

GI number: 126207564

Start: 86901

End: 87767

Strand: Reverse

Name: tonB2 [H]

Synonym: APL_0076

Alternate gene names: 126207564

Gene position: 87767-86901 (Counterclockwise)

Preceding gene: 126207565

Following gene: 126207563

Centisome position: 3.86

GC content: 47.87

Gene sequence:

>867_bases
ATGAAGAAAAAACATTCTCGTATCGGTTTAACCGGCTCCATTCTTATCCATACCGCTATTTTCGGCGGTTTAGCCTCTAT
GGTAACCCATTCTCATTCCGATGATTTACCCCAAGAAGAAACGATGTCTATGGAGTTAGTCGCCGCACTTTTGGAACAAC
CTCAAGTTGCCGTCGCACAAGAAGAGCCGGCACCGCCGGAGCCGCCGGAGCCGGAGAAAGTCGAAGTCGAGCCGGAACCG
GAGCCTGAAGCGGAAGCTATTCCAGAACTTAAACCTCAGCCTAAGCCGAAAGAAAAACCGAAGGAAAAGCCTAAGGAAAA
ACCAAAACCGAAAGAGCCGCCAAAGCCTAAAGAAAAAGAAAAACCTAAAAAAGAGAAAGTAAAAGATAAACCGATTAAGG
CGTTAGAAAAAGGTCCTGAAGCAAAACAAGGTATTGTCGCCAAAGCGATTCCTAATGCGGTACAAGGCACTCAATTACGT
GCAGGTATTCCAAACGGTAAACCGGAAGGTAATCCGAACGGTCTTTCCGCCAACGGCTCACAAAACGGTGCGGTAGGCGG
TAGTGGTAGCGGAGCTTCCGGAAGTGAAATCGGTGCGTATAAAGCGGCATTACAACGTGCATTACAACGCCGAGCCAATA
ACGCTTATCCGACTCGAGAAAAAATGATGCGCAAAACGGGCGTGGTTACTATCGGTTTTACCGTATCCTCTTCCGGCGAG
TTAATCAATGTCAAAGTGTTAAACAGTTCCGGTAACGGTAATCTTGATAATGCGGCGGTCAAAGCGGCACAAAGCACGAA
AGTTTCACCGCCGCCGGCGGGATTCCCGAGTAATGTGACCGTTCCGGTAAAATTCTCGATTGAATAA

Upstream 100 bases:

>100_bases
TGAAAAATTTGTCGAACTGACTGATGTTCTCTCTGCGAATGAAATTAAGAATGTCGCTATCGTGACCAAAAAAGATACCT
CGAAGAAATAGGATACGAGT

Downstream 100 bases:

>100_bases
ATCTTGTCAATAAGCTCCCGTAAGGGAGCTTATTTTTACTTAAGCCAAGCGGTCGTTTTTAGCTTACTTGTTGCAAAAAA
TCGACAAAAGATAACCGCTT

Product: protein TonB2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MKKKHSRIGLTGSILIHTAIFGGLASMVTHSHSDDLPQEETMSMELVAALLEQPQVAVAQEEPAPPEPPEPEKVEVEPEP
EPEAEAIPELKPQPKPKEKPKEKPKEKPKPKEPPKPKEKEKPKKEKVKDKPIKALEKGPEAKQGIVAKAIPNAVQGTQLR
AGIPNGKPEGNPNGLSANGSQNGAVGGSGSGASGSEIGAYKAALQRALQRRANNAYPTREKMMRKTGVVTIGFTVSSSGE
LINVKVLNSSGNGNLDNAAVKAAQSTKVSPPPAGFPSNVTVPVKFSIE

Sequences:

>Translated_288_residues
MKKKHSRIGLTGSILIHTAIFGGLASMVTHSHSDDLPQEETMSMELVAALLEQPQVAVAQEEPAPPEPPEPEKVEVEPEP
EPEAEAIPELKPQPKPKEKPKEKPKEKPKPKEPPKPKEKEKPKKEKVKDKPIKALEKGPEAKQGIVAKAIPNAVQGTQLR
AGIPNGKPEGNPNGLSANGSQNGAVGGSGSGASGSEIGAYKAALQRALQRRANNAYPTREKMMRKTGVVTIGFTVSSSGE
LINVKVLNSSGNGNLDNAAVKAAQSTKVSPPPAGFPSNVTVPVKFSIE
>Mature_288_residues
MKKKHSRIGLTGSILIHTAIFGGLASMVTHSHSDDLPQEETMSMELVAALLEQPQVAVAQEEPAPPEPPEPEKVEVEPEP
EPEAEAIPELKPQPKPKEKPKEKPKEKPKPKEPPKPKEKEKPKKEKVKDKPIKALEKGPEAKQGIVAKAIPNAVQGTQLR
AGIPNGKPEGNPNGLSANGSQNGAVGGSGSGASGSEIGAYKAALQRALQRRANNAYPTREKMMRKTGVVTIGFTVSSSGE
LINVKVLNSSGNGNLDNAAVKAAQSTKVSPPPAGFPSNVTVPVKFSIE

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003538
- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 30409; Mature: 30409

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKHSRIGLTGSILIHTAIFGGLASMVTHSHSDDLPQEETMSMELVAALLEQPQVAVAQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEC
EEPAPPEPPEPEKVEVEPEPEPEAEAIPELKPQPKPKEKPKEKPKEKPKPKEPPKPKEKE
CCCCCCCCCCCCEEEECCCCCCHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHC
KPKKEKVKDKPIKALEKGPEAKQGIVAKAIPNAVQGTQLRAGIPNGKPEGNPNGLSANGS
CCHHHHHHCCHHHHHHCCCCHHHCCHHHHCCCHHCCCEEECCCCCCCCCCCCCCCCCCCC
QNGAVGGSGSGASGSEIGAYKAALQRALQRRANNAYPTREKMMRKTGVVTIGFTVSSSGE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEEEEECCCCC
LINVKVLNSSGNGNLDNAAVKAAQSTKVSPPPAGFPSNVTVPVKFSIE
EEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MKKKHSRIGLTGSILIHTAIFGGLASMVTHSHSDDLPQEETMSMELVAALLEQPQVAVAQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEC
EEPAPPEPPEPEKVEVEPEPEPEAEAIPELKPQPKPKEKPKEKPKEKPKPKEPPKPKEKE
CCCCCCCCCCCCEEEECCCCCCHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHC
KPKKEKVKDKPIKALEKGPEAKQGIVAKAIPNAVQGTQLRAGIPNGKPEGNPNGLSANGS
CCHHHHHHCCHHHHHHCCCCHHHCCHHHHCCCHHCCCEEECCCCCCCCCCCCCCCCCCCC
QNGAVGGSGSGASGSEIGAYKAALQRALQRRANNAYPTREKMMRKTGVVTIGFTVSSSGE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEEEEECCCCC
LINVKVLNSSGNGNLDNAAVKAAQSTKVSPPPAGFPSNVTVPVKFSIE
EEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9423852 [H]