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The map label for this gene is recR [H]

Identifier: 126207562

GI number: 126207562

Start: 85727

End: 86392

Strand: Reverse

Name: recR [H]

Synonym: APL_0074

Alternate gene names: 126207562

Gene position: 86392-85727 (Counterclockwise)

Preceding gene: 126207563

Following gene: 126207561

Centisome position: 3.8

GC content: 44.59

Gene sequence:

>666_bases
ATGGATAGTTCGCTTTATTGCGGCTATCCATTATTAATTTTCAACTATCCGTTTCTATTTATGCAAATTAGCCCTTTACT
CGAAAATCTGATGGAAGCCCTACGTGCATTACCTGGTGTCGGCCCGAAATCCGCGCAGCGTATGGCATACCATTTATTGC
AACGCAATCGTTCCGGCGGTATCAATTTATCCAAAGCCTTAAATGAAGCGATGACGCATATCGGTCATTGCCGTTCTTGC
CGTACTTTTACCGAAGAAGACGAATGCAATATTTGTAAAAATCCTCGTCGCCAAATGAGCGGTCAGCTTTGCGTAGTAGA
AATGCCGGAAGATATTCAAGCGATTGAACAAACCGGACAGTTTTCGGGACGTTATTTCGTATTAATGGGACATCTTTCAC
CGTTGGACGGTATCGGACCGAGAGAAATCGGCTTGGATTTGTTACAAAGCCGTTTAGAAAACGAATCTTTTCACGAAGTT
ATTCTAGCTACCAATCCGACTATTGAAGGTGATGCCACCGCCAACTATATTGCGGAAATGTGCCGCATTCACAACGTGAA
AGTAACTCGAATTGCGCATGGGATTCCGGTCGGCGGTTCATTAGAAATGGTGGACGGTACGACCCTTTCCCACTCTTTTG
CCGGCAGACGAGATGTTTCGTTATAA

Upstream 100 bases:

>100_bases
GTTCGCCGTGCGGAAGAAATGCAAAAAGAAAAAATGGCAAGCGTGACCGCCGGCATGCAATTACCGCCGGGCATGAAATT
CCCATTCTAATTTAGCGATA

Downstream 100 bases:

>100_bases
GGCGAAAAGGTTATTTGGCTAGTCATAAAAGTCTGATACAATTACTCAGGTATTAATCACTAGAGGTTATCATGGAAACT
ATCGATACTATTGAAAAAAT

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MDSSLYCGYPLLIFNYPFLFMQISPLLENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGINLSKALNEAMTHIGHCRSC
RTFTEEDECNICKNPRRQMSGQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLDLLQSRLENESFHEV
ILATNPTIEGDATANYIAEMCRIHNVKVTRIAHGIPVGGSLEMVDGTTLSHSFAGRRDVSL

Sequences:

>Translated_221_residues
MDSSLYCGYPLLIFNYPFLFMQISPLLENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGINLSKALNEAMTHIGHCRSC
RTFTEEDECNICKNPRRQMSGQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLDLLQSRLENESFHEV
ILATNPTIEGDATANYIAEMCRIHNVKVTRIAHGIPVGGSLEMVDGTTLSHSFAGRRDVSL
>Mature_221_residues
MDSSLYCGYPLLIFNYPFLFMQISPLLENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGINLSKALNEAMTHIGHCRSC
RTFTEEDECNICKNPRRQMSGQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLDLLQSRLENESFHEV
ILATNPTIEGDATANYIAEMCRIHNVKVTRIAHGIPVGGSLEMVDGTTLSHSFAGRRDVSL

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=199, Percent_Identity=73.3668341708543, Blast_Score=309, Evalue=8e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF02132 RecR; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 24555; Mature: 24555

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSSLYCGYPLLIFNYPFLFMQISPLLENLMEALRALPGVGPKSAQRMAYHLLQRNRSGG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC
INLSKALNEAMTHIGHCRSCRTFTEEDECNICKNPRRQMSGQLCVVEMPEDIQAIEQTGQ
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEEECCHHHHHHHHHCC
FSGRYFVLMGHLSPLDGIGPREIGLDLLQSRLENESFHEVILATNPTIEGDATANYIAEM
CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHEEEEECCCCCCCCHHHHHHHHH
CRIHNVKVTRIAHGIPVGGSLEMVDGTTLSHSFAGRRDVSL
HHHCCCEEEHHCCCCCCCCCEEEECCCCHHHCCCCCCCCCC
>Mature Secondary Structure
MDSSLYCGYPLLIFNYPFLFMQISPLLENLMEALRALPGVGPKSAQRMAYHLLQRNRSGG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC
INLSKALNEAMTHIGHCRSCRTFTEEDECNICKNPRRQMSGQLCVVEMPEDIQAIEQTGQ
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEEECCHHHHHHHHHCC
FSGRYFVLMGHLSPLDGIGPREIGLDLLQSRLENESFHEVILATNPTIEGDATANYIAEM
CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHEEEEECCCCCCCCHHHHHHHHH
CRIHNVKVTRIAHGIPVGGSLEMVDGTTLSHSFAGRRDVSL
HHHCCCEEEHHCCCCCCCCCEEEECCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA