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The map label for this gene is ydhD [H]

Identifier: 126207561

GI number: 126207561

Start: 85329

End: 85655

Strand: Reverse

Name: ydhD [H]

Synonym: APL_0073

Alternate gene names: 126207561

Gene position: 85655-85329 (Counterclockwise)

Preceding gene: 126207562

Following gene: 126207560

Centisome position: 3.77

GC content: 41.59

Gene sequence:

>327_bases
ATGGAAACTATCGATACTATTGAAAAAATCAAAAAACAAATCGGCGAAAACCCAATTCTCCTTTATATGAAAGGTTCACC
GAAATTCCCTTCATGCGGTTTCTCTGCACGTGCGGGAGAAGCGGTAATCAACTGCCAAGTGCCGTTCGGTTATGTAGATA
TTTTAACTAATCCGGATATTCGTGCCGAGTTATTCGCAAACTGGCCGACTTTCCCACAATTATGGGTGGAGGGCGAATTA
GTTGGAGGTTGCGACATCGTGTTAGAAATGTTCCAAAAAGGCGAATTACAAACCTTATTAAAAGAAGTGGCTGCAAAACA
CGCTTAA

Upstream 100 bases:

>100_bases
TTGCCGGCAGACGAGATGTTTCGTTATAAGGCGAAAAGGTTATTTGGCTAGTCATAAAAGTCTGATACAATTACTCAGGT
ATTAATCACTAGAGGTTATC

Downstream 100 bases:

>100_bases
TTCTTTTACAAACAGTTAGCCCAAGCAATTCGCTTGGGCTTTTTTTATCGAAAAAATGCCGTTTTGCTCTTACATTCTTA
TTCGTTTTTGGCTTACAATG

Product: monothiol glutaredoxin-like protein

Products: NA

Alternate protein names: Grx4; Monothiol glutaredoxin [H]

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
METIDTIEKIKKQIGENPILLYMKGSPKFPSCGFSARAGEAVINCQVPFGYVDILTNPDIRAELFANWPTFPQLWVEGEL
VGGCDIVLEMFQKGELQTLLKEVAAKHA

Sequences:

>Translated_108_residues
METIDTIEKIKKQIGENPILLYMKGSPKFPSCGFSARAGEAVINCQVPFGYVDILTNPDIRAELFANWPTFPQLWVEGEL
VGGCDIVLEMFQKGELQTLLKEVAAKHA
>Mature_108_residues
METIDTIEKIKKQIGENPILLYMKGSPKFPSCGFSARAGEAVINCQVPFGYVDILTNPDIRAELFANWPTFPQLWVEGEL
VGGCDIVLEMFQKGELQTLLKEVAAKHA

Specific function: Monothiol glutaredoxin involved in the biogenesis of iron-sulfur clusters [H]

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI95113651, Length=93, Percent_Identity=39.7849462365591, Blast_Score=82, Evalue=1e-16,
Organism=Homo sapiens, GI42516576, Length=104, Percent_Identity=32.6923076923077, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1787943, Length=104, Percent_Identity=75, Blast_Score=166, Evalue=3e-43,
Organism=Caenorhabditis elegans, GI17556042, Length=97, Percent_Identity=35.0515463917526, Blast_Score=79, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI71988159, Length=80, Percent_Identity=40, Blast_Score=76, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI71988153, Length=80, Percent_Identity=40, Blast_Score=75, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6325198, Length=102, Percent_Identity=41.1764705882353, Blast_Score=85, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6320303, Length=87, Percent_Identity=42.5287356321839, Blast_Score=82, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6321022, Length=83, Percent_Identity=43.3734939759036, Blast_Score=82, Evalue=2e-17,
Organism=Drosophila melanogaster, GI19921242, Length=96, Percent_Identity=38.5416666666667, Blast_Score=82, Evalue=5e-17,
Organism=Drosophila melanogaster, GI24642023, Length=95, Percent_Identity=37.8947368421053, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 11999; Mature: 11999

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METIDTIEKIKKQIGENPILLYMKGSPKFPSCGFSARAGEAVINCQVPFGYVDILTNPDI
CCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCC
RAELFANWPTFPQLWVEGELVGGCDIVLEMFQKGELQTLLKEVAAKHA
CEEEEECCCCCCCEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
METIDTIEKIKKQIGENPILLYMKGSPKFPSCGFSARAGEAVINCQVPFGYVDILTNPDI
CCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCC
RAELFANWPTFPQLWVEGELVGGCDIVLEMFQKGELQTLLKEVAAKHA
CEEEEECCCCCCCEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9511768 [H]