| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126176460
Identifier: 126176460
GI number: 126176460
Start: 5003722
End: 5005032
Strand: Reverse
Name: 126176460
Synonym: Sbal_4275
Alternate gene names: NA
Gene position: 5005032-5003722 (Counterclockwise)
Preceding gene: 126176461
Following gene: 126176459
Centisome position: 97.61
GC content: 49.5
Gene sequence:
>1311_bases ATGAGTGCGCCAGAACTTAACATCACGCCGACGGCTAAGATGAAAGGCGCGCGGTTGATGAATCCATTTAATGGCATGCT GCGCCTTTGGTGCTTTGACGTCGGCAGTGTGAGCTTTTTAGGTACTGGCTTACTGGGAATGGTCTTAGGTTGCATTACAG CGTTGCAGGGCAAAAGTGACAGTGCTGAACTGTTGTTTTGTATGGGAATCGTTTCAAGCTCGGCGGCGGTAGCATGGCAA CTCATACGTTTGATGGCGAGCGAGTGCGCCCAGTTAATTCCCCATTATCGCCGCCATATTTATATCCAAAGCGCAGTGGT GTTAACCAGCGTATTTGGCATAAGCGTATTGTTCTGTTTAGCTTTGGGTTCAACGTCTAGCCTATCCACCTTAGTGTTGG CCTTGGTGATGAGTTTTGCCTTTATTTGCCTGTGTTTACTCAGCACTCAGTGGTTTTACGCTTCCTTCTTACTGTTTGTT TTAGTGCCGTTTATCTCCTTGATTACAGGTTATATTCCCCTATGGTTAAGCGCGATTGCACTGGTGGCGTTAGGTGCTTT CATTATCCGTATCTGCCGCGCTTTACCTTGGCGTGCTGAGGCTAGAACCGTGTACCTCAATGGCCTCGAAATGGGCTGGT TCTGGCTGCCCAATTTGCAATCGATGCGTATCTTGAGCCGCTTTGAGCGTTATCTGCATCCCACCAATTTTTTTATCGGC CCTATGCTGACGATTTTACTGCTGCTTATACCGGCAGTCTGCCTAGTGCTTGGGGTGTTATCGCACCAATTCCATCAGAA TTTCCCCGTGTTACTGCTGTTGGCACAGTTCAGCGTGATTATGTGTTCGCTGGTGCATTGGAGCCGAGTGCAGCGTTCGC GCTCGACAGAAACCTTATTGCTGATGCCAGGATTTGATGGTCGCAAAGGACTCATAGCGGCTTTTTGCCGTGGCCAGCAA AGACTGCTGAATGTGGTAGTTGGCATTATGCTGGCGTGTAGTCTGCTGCTGGGTTGGCTCAGTGGTGATCTGAATATGCA GTTAGTAGGTCATCTGGTGCTTAGCACTTACTGGGCCTGCGCTTTGACCTTAGGTTTTGGCTGCATGTGTCGCCGAGTGT TGCATGTCACGCTCACTATGACGGTTGTTGCGGGGCATTCCCTGTGGGTGTCCATCAGCCTTGCATCGTTACGCGATGGC GGCAATCTAGGCGATTGGATTATCTGGGATATGCTCTTAATGATACTTGGGAGCATAGTACTGATTTGGGGCAAGAAAAC CCTCTGGAAGGGAGATGTCATTAGCGGCTAA
Upstream 100 bases:
>100_bases ATTCAGTGCTGGTGGATTTAGGCGAGCACAGCGCGCCAATATCGGGCGTGTTAAAGAACGAAGCCCTTAATCTGGAACAG CTTTTTATGGAGCTACACAG
Downstream 100 bases:
>100_bases ACGGATATAAATTGCAATATTGGGACTCAGCTTGCACAAGATTAGAGCAAAAACTCTTAGTTTTTGACTGGCCTTCAGGT AGAATGGCCAAAAAGCGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MSAPELNITPTAKMKGARLMNPFNGMLRLWCFDVGSVSFLGTGLLGMVLGCITALQGKSDSAELLFCMGIVSSSAAVAWQ LIRLMASECAQLIPHYRRHIYIQSAVVLTSVFGISVLFCLALGSTSSLSTLVLALVMSFAFICLCLLSTQWFYASFLLFV LVPFISLITGYIPLWLSAIALVALGAFIIRICRALPWRAEARTVYLNGLEMGWFWLPNLQSMRILSRFERYLHPTNFFIG PMLTILLLLIPAVCLVLGVLSHQFHQNFPVLLLLAQFSVIMCSLVHWSRVQRSRSTETLLLMPGFDGRKGLIAAFCRGQQ RLLNVVVGIMLACSLLLGWLSGDLNMQLVGHLVLSTYWACALTLGFGCMCRRVLHVTLTMTVVAGHSLWVSISLASLRDG GNLGDWIIWDMLLMILGSIVLIWGKKTLWKGDVISG
Sequences:
>Translated_436_residues MSAPELNITPTAKMKGARLMNPFNGMLRLWCFDVGSVSFLGTGLLGMVLGCITALQGKSDSAELLFCMGIVSSSAAVAWQ LIRLMASECAQLIPHYRRHIYIQSAVVLTSVFGISVLFCLALGSTSSLSTLVLALVMSFAFICLCLLSTQWFYASFLLFV LVPFISLITGYIPLWLSAIALVALGAFIIRICRALPWRAEARTVYLNGLEMGWFWLPNLQSMRILSRFERYLHPTNFFIG PMLTILLLLIPAVCLVLGVLSHQFHQNFPVLLLLAQFSVIMCSLVHWSRVQRSRSTETLLLMPGFDGRKGLIAAFCRGQQ RLLNVVVGIMLACSLLLGWLSGDLNMQLVGHLVLSTYWACALTLGFGCMCRRVLHVTLTMTVVAGHSLWVSISLASLRDG GNLGDWIIWDMLLMILGSIVLIWGKKTLWKGDVISG >Mature_435_residues SAPELNITPTAKMKGARLMNPFNGMLRLWCFDVGSVSFLGTGLLGMVLGCITALQGKSDSAELLFCMGIVSSSAAVAWQL IRLMASECAQLIPHYRRHIYIQSAVVLTSVFGISVLFCLALGSTSSLSTLVLALVMSFAFICLCLLSTQWFYASFLLFVL VPFISLITGYIPLWLSAIALVALGAFIIRICRALPWRAEARTVYLNGLEMGWFWLPNLQSMRILSRFERYLHPTNFFIGP MLTILLLLIPAVCLVLGVLSHQFHQNFPVLLLLAQFSVIMCSLVHWSRVQRSRSTETLLLMPGFDGRKGLIAAFCRGQQR LLNVVVGIMLACSLLLGWLSGDLNMQLVGHLVLSTYWACALTLGFGCMCRRVLHVTLTMTVVAGHSLWVSISLASLRDGG NLGDWIIWDMLLMILGSIVLIWGKKTLWKGDVISG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48147; Mature: 48016
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPELNITPTAKMKGARLMNPFNGMLRLWCFDVGSVSFLGTGLLGMVLGCITALQGKSD CCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC SAELLFCMGIVSSSAAVAWQLIRLMASECAQLIPHYRRHIYIQSAVVLTSVFGISVLFCL CHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALGSTSSLSTLVLALVMSFAFICLCLLSTQWFYASFLLFVLVPFISLITGYIPLWLSAIA HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVALGAFIIRICRALPWRAEARTVYLNGLEMGWFWLPNLQSMRILSRFERYLHPTNFFIG HHHHHHHHHHHHHHCCCCCCCCEEEEECEEECEEECCCHHHHHHHHHHHHHHCCCCHHHH PMLTILLLLIPAVCLVLGVLSHQFHQNFPVLLLLAQFSVIMCSLVHWSRVQRSRSTETLL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE LMPGFDGRKGLIAAFCRGQQRLLNVVVGIMLACSLLLGWLSGDLNMQLVGHLVLSTYWAC EECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH ALTLGFGCMCRRVLHVTLTMTVVAGHSLWVSISLASLRDGGNLGDWIIWDMLLMILGSIV HHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHH LIWGKKTLWKGDVISG HHHCCCCEECCCCCCC >Mature Secondary Structure SAPELNITPTAKMKGARLMNPFNGMLRLWCFDVGSVSFLGTGLLGMVLGCITALQGKSD CCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC SAELLFCMGIVSSSAAVAWQLIRLMASECAQLIPHYRRHIYIQSAVVLTSVFGISVLFCL CHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALGSTSSLSTLVLALVMSFAFICLCLLSTQWFYASFLLFVLVPFISLITGYIPLWLSAIA HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVALGAFIIRICRALPWRAEARTVYLNGLEMGWFWLPNLQSMRILSRFERYLHPTNFFIG HHHHHHHHHHHHHHCCCCCCCCEEEEECEEECEEECCCHHHHHHHHHHHHHHCCCCHHHH PMLTILLLLIPAVCLVLGVLSHQFHQNFPVLLLLAQFSVIMCSLVHWSRVQRSRSTETLL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE LMPGFDGRKGLIAAFCRGQQRLLNVVVGIMLACSLLLGWLSGDLNMQLVGHLVLSTYWAC EECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH ALTLGFGCMCRRVLHVTLTMTVVAGHSLWVSISLASLRDGGNLGDWIIWDMLLMILGSIV HHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHH LIWGKKTLWKGDVISG HHHCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA