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The map label for this gene is 126176078

Identifier: 126176078

GI number: 126176078

Start: 4566135

End: 4566578

Strand: Reverse

Name: 126176078

Synonym: Sbal_3888

Alternate gene names: NA

Gene position: 4566578-4566135 (Counterclockwise)

Preceding gene: 126176079

Following gene: 126176073

Centisome position: 89.06

GC content: 37.84

Gene sequence:

>444_bases
ATGAAGTGTTCAATTTTATCCGCCTTGGTTATTTTTGCGGTATCAAACTATGGTTTTGCAAAAAGTCTTAATGTGTATGG
GGATGTGCAAGTTACAGATATACAACCAACGAGTAGTTTTATTTGGGAGCGTGAAAATAAAAAATCACCTCAATATCCAA
TAGAACTCGCTCGCTCTGGCATTGTTGGTTGTGCTGTCATGTCTTTTGATATTTCAGAATCGGGTAAGGCCGAAAATATC
GAAGTCGTTAAATCTGTTCCTCAAAAATCACTGGGCAAATACTCAAGTCAGATATTAAAAAAATGGAACTGGGTCCCCAC
TTCCGCTACGAACGTAATGACTTCTGAAAAAAGAACCATAAGGTTAGATTTTTGTATAGGTGATGAGTCGACGGAACAAT
CTCAAAATGCCTGTAAGCAACAAACGCAATTAGTATGTGGCTAA

Upstream 100 bases:

>100_bases
ACGTTATTTACAACTTAAGTACTGTCAGGGTTAGTGGTTATTAATCAAAAAATAATTAGTGATAGGGCATTATTTTAATT
CATTAAACAATGGAGTGTAT

Downstream 100 bases:

>100_bases
CGTCAACTTAACCATTTCAAGTTGCAAGCAAAGCCAAATCGCTTACTGCGGATTTTTTGTTTGCCAACTGCGCCAAGTAA
AAGTGATTAACGCGGCGAGT

Product: TonB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MKCSILSALVIFAVSNYGFAKSLNVYGDVQVTDIQPTSSFIWERENKKSPQYPIELARSGIVGCAVMSFDISESGKAENI
EVVKSVPQKSLGKYSSQILKKWNWVPTSATNVMTSEKRTIRLDFCIGDESTEQSQNACKQQTQLVCG

Sequences:

>Translated_147_residues
MKCSILSALVIFAVSNYGFAKSLNVYGDVQVTDIQPTSSFIWERENKKSPQYPIELARSGIVGCAVMSFDISESGKAENI
EVVKSVPQKSLGKYSSQILKKWNWVPTSATNVMTSEKRTIRLDFCIGDESTEQSQNACKQQTQLVCG
>Mature_147_residues
MKCSILSALVIFAVSNYGFAKSLNVYGDVQVTDIQPTSSFIWERENKKSPQYPIELARSGIVGCAVMSFDISESGKAENI
EVVKSVPQKSLGKYSSQILKKWNWVPTSATNVMTSEKRTIRLDFCIGDESTEQSQNACKQQTQLVCG

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16268; Mature: 16268

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCSILSALVIFAVSNYGFAKSLNVYGDVQVTDIQPTSSFIWERENKKSPQYPIELARSG
CCHHHHHHHHHHHHCCCCCEEECCEECCEEEEECCCCHHHHEECCCCCCCCCCHHHHHCC
IVGCAVMSFDISESGKAENIEVVKSVPQKSLGKYSSQILKKWNWVPTSATNVMTSEKRTI
CEEEEEEEECCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEE
RLDFCIGDESTEQSQNACKQQTQLVCG
EEEEEECCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKCSILSALVIFAVSNYGFAKSLNVYGDVQVTDIQPTSSFIWERENKKSPQYPIELARSG
CCHHHHHHHHHHHHCCCCCEEECCEECCEEEEECCCCHHHHEECCCCCCCCCCHHHHHCC
IVGCAVMSFDISESGKAENIEVVKSVPQKSLGKYSSQILKKWNWVPTSATNVMTSEKRTI
CEEEEEEEECCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEE
RLDFCIGDESTEQSQNACKQQTQLVCG
EEEEEECCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA