| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126176073
Identifier: 126176073
GI number: 126176073
Start: 4559827
End: 4560882
Strand: Reverse
Name: 126176073
Synonym: Sbal_3883
Alternate gene names: NA
Gene position: 4560882-4559827 (Counterclockwise)
Preceding gene: 126176078
Following gene: 126176072
Centisome position: 88.95
GC content: 49.62
Gene sequence:
>1056_bases TTGTCAGCGTTACGATTTCTCGCGGGAGCAACGGCATTTAATACCTTGGCAGAACAAGGTCTTAAATCTGAACATTTTAC CCAGCTACTTGCCGCCTCTGGTGGACCCAAATGGCTTGGTATCGCTGGGTTAGATAAGTATCTGTTTTCTGAGTTTTTCA AAAACAGACAAACACCGCTGTATACACTCGGCGCATCTTCAGGGGCGTGGCGTTTAGCGTGTTTGGCGCAGCAAGATCCC CTTGCTGCCTATGGTCGCTTAGAGGATTTTTATATTGGTCAGCGTTATGACAGCATGCCAACCCCGCAGAAAGTCAGTGC ACAAGTTAAAGGCGTAGTGCAGGGGATTTTAGGCGCCAGTGGCGGTAGTGATATCGTCAACAATTCTCATATCCACAGTC ATTTAGTGGTATGCCGCGGCAAACATTTAAATCGTTTAACGGCAAAGCTGCTACTCGCTGCCGGACTGGCGATGACGGCG GCGACCAACTTATTGAGCCGCCGAAGTTTAGGCTGGCATTTTGAACGTGTGGTCTTTAGTCAACAAGCTGTAGCATCCCC CTTTTTGCAACTCAATGATTTACCCAGTCAGCAGGCCGAATTAACCGAGGCCAATGTCGATGCTGTGATGTTAGCAACGG GATCGATTCCGTTATTGCTGGCCTCAGTGCCGCAAATTGAGGGCGTTGCCGATGGGCAATATTACGATGGCGGCATTACC GACTATCACTTCGATTTGCCTTTATCCCACGCAACTGGCTTGACGCTGTATCCACATTTTTATCCAACGATCAGCCCAGG ATGGTTCGATAAATCCTTGAAGTGGCGCCAAGGTCGAGCCAATTATCACAATGCACTCGTGTTGGCGCCAACGGCCGAAT TTGTGGCTTCATTACCCTTTGGCAAAATCCCCGATCGCGAAGATTTTAAACAACTGGATACGGCGCAGCGGATGCAATAT TGGCGAACAGCGGTTGCTTTGAGTGAACGTCTGGCCGAGGAGTTTGCCGAGGTTGTTGCTAAGGGAAATGTGCTGGAGCG ACTAGAGCGCTTTTAG
Upstream 100 bases:
>100_bases TGGCGAGTGAAGTCGATGATATGAATTGTTTATTGACGTGCGCCATCGTGGTTTAATGCGTTATTTCGCTTTGATGGCAT TTGTTTGAAGGAACACAGAT
Downstream 100 bases:
>100_bases TTTTAAGTGAGGTGGTCTAGAAAACGGGGTTTAAAATGGCTGGTTTGAAATGCCCTGATTTAACATCACCTGATCTAACC TAGTTGGGTCGCCAATTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MSALRFLAGATAFNTLAEQGLKSEHFTQLLAASGGPKWLGIAGLDKYLFSEFFKNRQTPLYTLGASSGAWRLACLAQQDP LAAYGRLEDFYIGQRYDSMPTPQKVSAQVKGVVQGILGASGGSDIVNNSHIHSHLVVCRGKHLNRLTAKLLLAAGLAMTA ATNLLSRRSLGWHFERVVFSQQAVASPFLQLNDLPSQQAELTEANVDAVMLATGSIPLLLASVPQIEGVADGQYYDGGIT DYHFDLPLSHATGLTLYPHFYPTISPGWFDKSLKWRQGRANYHNALVLAPTAEFVASLPFGKIPDREDFKQLDTAQRMQY WRTAVALSERLAEEFAEVVAKGNVLERLERF
Sequences:
>Translated_351_residues MSALRFLAGATAFNTLAEQGLKSEHFTQLLAASGGPKWLGIAGLDKYLFSEFFKNRQTPLYTLGASSGAWRLACLAQQDP LAAYGRLEDFYIGQRYDSMPTPQKVSAQVKGVVQGILGASGGSDIVNNSHIHSHLVVCRGKHLNRLTAKLLLAAGLAMTA ATNLLSRRSLGWHFERVVFSQQAVASPFLQLNDLPSQQAELTEANVDAVMLATGSIPLLLASVPQIEGVADGQYYDGGIT DYHFDLPLSHATGLTLYPHFYPTISPGWFDKSLKWRQGRANYHNALVLAPTAEFVASLPFGKIPDREDFKQLDTAQRMQY WRTAVALSERLAEEFAEVVAKGNVLERLERF >Mature_350_residues SALRFLAGATAFNTLAEQGLKSEHFTQLLAASGGPKWLGIAGLDKYLFSEFFKNRQTPLYTLGASSGAWRLACLAQQDPL AAYGRLEDFYIGQRYDSMPTPQKVSAQVKGVVQGILGASGGSDIVNNSHIHSHLVVCRGKHLNRLTAKLLLAAGLAMTAA TNLLSRRSLGWHFERVVFSQQAVASPFLQLNDLPSQQAELTEANVDAVMLATGSIPLLLASVPQIEGVADGQYYDGGITD YHFDLPLSHATGLTLYPHFYPTISPGWFDKSLKWRQGRANYHNALVLAPTAEFVASLPFGKIPDREDFKQLDTAQRMQYW RTAVALSERLAEEFAEVVAKGNVLERLERF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38543; Mature: 38412
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALRFLAGATAFNTLAEQGLKSEHFTQLLAASGGPKWLGIAGLDKYLFSEFFKNRQTPL CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCE YTLGASSGAWRLACLAQQDPLAAYGRLEDFYIGQRYDSMPTPQKVSAQVKGVVQGILGAS EEECCCCCCEEEEEECCCCCCHHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC GGSDIVNNSHIHSHLVVCRGKHLNRLTAKLLLAAGLAMTAATNLLSRRSLGWHFERVVFS CCCCCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH QQAVASPFLQLNDLPSQQAELTEANVDAVMLATGSIPLLLASVPQIEGVADGQYYDGGIT HHHHHCCHHHHCCCCCHHHHHHHCCCCEEEEECCCCHHHHHCCCCCCCCCCCCEECCCCC DYHFDLPLSHATGLTLYPHFYPTISPGWFDKSLKWRQGRANYHNALVLAPTAEFVASLPF EEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEEECCHHHHHHCCC GKIPDREDFKQLDTAQRMQYWRTAVALSERLAEEFAEVVAKGNVLERLERF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC >Mature Secondary Structure SALRFLAGATAFNTLAEQGLKSEHFTQLLAASGGPKWLGIAGLDKYLFSEFFKNRQTPL CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCE YTLGASSGAWRLACLAQQDPLAAYGRLEDFYIGQRYDSMPTPQKVSAQVKGVVQGILGAS EEECCCCCCEEEEEECCCCCCHHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC GGSDIVNNSHIHSHLVVCRGKHLNRLTAKLLLAAGLAMTAATNLLSRRSLGWHFERVVFS CCCCCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH QQAVASPFLQLNDLPSQQAELTEANVDAVMLATGSIPLLLASVPQIEGVADGQYYDGGIT HHHHHCCHHHHCCCCCHHHHHHHCCCCEEEEECCCCHHHHHCCCCCCCCCCCCEECCCCC DYHFDLPLSHATGLTLYPHFYPTISPGWFDKSLKWRQGRANYHNALVLAPTAEFVASLPF EEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEEECCHHHHHHCCC GKIPDREDFKQLDTAQRMQYWRTAVALSERLAEEFAEVVAKGNVLERLERF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA