| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126176079
Identifier: 126176079
GI number: 126176079
Start: 4566898
End: 4568364
Strand: Reverse
Name: 126176079
Synonym: Sbal_3889
Alternate gene names: NA
Gene position: 4568364-4566898 (Counterclockwise)
Preceding gene: 126176080
Following gene: 126176078
Centisome position: 89.1
GC content: 48.53
Gene sequence:
>1467_bases ATGAGCCTGAAAAAGTTTACCCAGTACAAGTTACTGTTTTTAATGTTGTTGTCGCTTTGTGTCTTACTCCCTTTTATTCC AGATCAGGCTTACCACATTCCCGGCCCAGATATTGCGAAGCAAAACTTCCATGTGATTGAGTTTAACGATCAAGGTCAGC CCCATGACGAAAGGCAATGGCAAGGTTTAGAGGCGCGCATATCCCAGCCTGAGCCTGCTCAAATCCCTGAACTATTGATC TTTGTCCACGGCTGGCACCATAGTGCAGAGCCTAAAGATGAAAACTTTATCGCCTTCGAGCAGTTTTATCAGCAGATGGC GGCGTCCGATACGCAGCGCAACTTATTGGGTTTGTATATTGGCTGGCGCGGCGATAAATACGATCCCTTTTGGCTCGATG GCTCAGATGATGCGAAAAGCTGGATTGAACCTTTAGATTTTCCTACCATTTTACAGCGTAAACGGGTTGCTAAACGCATA GGTCAATTAGGTTTATCCCAATTGTTGGATAAGCTCGATAGCTTAGTGACAGAGCATAAACTGCTGCGTTATACCGTAAT TGGTCATAGTCTTGGCGGGGCGGTTGTTTTGCATGCCAGTAAAGATCGCATCAAGGCTGCTATCGATCATCAGCAGGATA ATCCCAATTTATTCTTACTGTTAAATCCTGCCGTGCCCGCGAAGGAATACCAGCCACTCGATACCTTAGTGAGCTTAGAT AGGCAAAAACCGAGTATGGTGGTATTGCAGTCGAAGGGCGATTTTGCGGTGAAAGAAGCTTTCAATTATATCAAGGATGG CGAGCGCGCCGTTGGTAATTCTTGGGCTATTACCCACGATATCGACAAATGCTCAGGTGGCAATTGCACTACGCCAATGA AGATGCCGTCGGCTTTGATGGCGCACGATCAAATCCCTGGCTGTATGATGACCTTGCCCCATTCTGGCTGGAAAATTCGT GCTCGTCTGCAGGCCCGTCGTACCGTGCAAACCTGTCCCGATGCCAATATGCAGGCCGTGTGGGTGCTGGCGGTGTCGGA TGAAATCGTCTCAGGACACAATGGTATTCTCACACCGGATCATGCCAAAGCCTTGTCTGAAGTGATGAGTATGATTGATT TGTATCGAAATCAATTACCTAAACATGCGGTGGAAAGTCCCGCCAACCAAGATCTCGGCACCTTAGCGCCAGAGTCAGAA GCTGCAACATCCACAGAAGGTGAAGCGCCTGTGCCACAAGAGCCAGTGATGATTGTCGAGCCTTTGCCTGAAGAACAAGA TTCACCGACGCCTGAGGTCAACGCACCATTGCAGGAGCCAAACGTATCACAGGAACAAGCTAAGTCTGCCGTTACTGAGG CATCGCCCGCGCCAATCAAAGCGCCAGAACTAGAATCAAAACCAGAGGCTAAGCCAAATGACGGCGCAGAGCCTCAACCT AAGGTTGAGACTGAAGGCATAAAGTGA
Upstream 100 bases:
>100_bases TGGGTCAATGGGGTTAGCGTATAATTTCGGCACTTTTGCTGTTAGCCCCTTTCAGCACGTCTATTTTGGCCTAGCTTGGC CGTTAATTATGTTGTTATAA
Downstream 100 bases:
>100_bases TTGAGTGCGAAATAGCTTGACCTTGTTTTGGAAGCGATTTTAATGAGTAAATTTATTTTACTCATTAAAATCAAAATCAA AAACAAATATTTCGATATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 488; Mature: 487
Protein sequence:
>488_residues MSLKKFTQYKLLFLMLLSLCVLLPFIPDQAYHIPGPDIAKQNFHVIEFNDQGQPHDERQWQGLEARISQPEPAQIPELLI FVHGWHHSAEPKDENFIAFEQFYQQMAASDTQRNLLGLYIGWRGDKYDPFWLDGSDDAKSWIEPLDFPTILQRKRVAKRI GQLGLSQLLDKLDSLVTEHKLLRYTVIGHSLGGAVVLHASKDRIKAAIDHQQDNPNLFLLLNPAVPAKEYQPLDTLVSLD RQKPSMVVLQSKGDFAVKEAFNYIKDGERAVGNSWAITHDIDKCSGGNCTTPMKMPSALMAHDQIPGCMMTLPHSGWKIR ARLQARRTVQTCPDANMQAVWVLAVSDEIVSGHNGILTPDHAKALSEVMSMIDLYRNQLPKHAVESPANQDLGTLAPESE AATSTEGEAPVPQEPVMIVEPLPEEQDSPTPEVNAPLQEPNVSQEQAKSAVTEASPAPIKAPELESKPEAKPNDGAEPQP KVETEGIK
Sequences:
>Translated_488_residues MSLKKFTQYKLLFLMLLSLCVLLPFIPDQAYHIPGPDIAKQNFHVIEFNDQGQPHDERQWQGLEARISQPEPAQIPELLI FVHGWHHSAEPKDENFIAFEQFYQQMAASDTQRNLLGLYIGWRGDKYDPFWLDGSDDAKSWIEPLDFPTILQRKRVAKRI GQLGLSQLLDKLDSLVTEHKLLRYTVIGHSLGGAVVLHASKDRIKAAIDHQQDNPNLFLLLNPAVPAKEYQPLDTLVSLD RQKPSMVVLQSKGDFAVKEAFNYIKDGERAVGNSWAITHDIDKCSGGNCTTPMKMPSALMAHDQIPGCMMTLPHSGWKIR ARLQARRTVQTCPDANMQAVWVLAVSDEIVSGHNGILTPDHAKALSEVMSMIDLYRNQLPKHAVESPANQDLGTLAPESE AATSTEGEAPVPQEPVMIVEPLPEEQDSPTPEVNAPLQEPNVSQEQAKSAVTEASPAPIKAPELESKPEAKPNDGAEPQP KVETEGIK >Mature_487_residues SLKKFTQYKLLFLMLLSLCVLLPFIPDQAYHIPGPDIAKQNFHVIEFNDQGQPHDERQWQGLEARISQPEPAQIPELLIF VHGWHHSAEPKDENFIAFEQFYQQMAASDTQRNLLGLYIGWRGDKYDPFWLDGSDDAKSWIEPLDFPTILQRKRVAKRIG QLGLSQLLDKLDSLVTEHKLLRYTVIGHSLGGAVVLHASKDRIKAAIDHQQDNPNLFLLLNPAVPAKEYQPLDTLVSLDR QKPSMVVLQSKGDFAVKEAFNYIKDGERAVGNSWAITHDIDKCSGGNCTTPMKMPSALMAHDQIPGCMMTLPHSGWKIRA RLQARRTVQTCPDANMQAVWVLAVSDEIVSGHNGILTPDHAKALSEVMSMIDLYRNQLPKHAVESPANQDLGTLAPESEA ATSTEGEAPVPQEPVMIVEPLPEEQDSPTPEVNAPLQEPNVSQEQAKSAVTEASPAPIKAPELESKPEAKPNDGAEPQPK VETEGIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54209; Mature: 54078
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKKFTQYKLLFLMLLSLCVLLPFIPDQAYHIPGPDIAKQNFHVIEFNDQGQPHDERQW CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEEEECCCCCCCHHHHH QGLEARISQPEPAQIPELLIFVHGWHHSAEPKDENFIAFEQFYQQMAASDTQRNLLGLYI CCHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEHHHHHHHHHHHCCHHCCEEEEEE GWRGDKYDPFWLDGSDDAKSWIEPLDFPTILQRKRVAKRIGQLGLSQLLDKLDSLVTEHK ECCCCCCCCEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLRYTVIGHSLGGAVVLHASKDRIKAAIDHQQDNPNLFLLLNPAVPAKEYQPLDTLVSLD HHEEEEEECCCCCEEEEECCHHHHHHHHCCCCCCCCEEEEECCCCCCHHCCCHHHHHHHC RQKPSMVVLQSKGDFAVKEAFNYIKDGERAVGNSWAITHDIDKCSGGNCTTPMKMPSALM CCCCCEEEEECCCCHHHHHHHHHHHCCCHHCCCCEEEEECHHHCCCCCCCCCCCCCHHHH AHDQIPGCMMTLPHSGWKIRARLQARRTVQTCPDANMQAVWVLAVSDEIVSGHNGILTPD HHCCCCCEEEECCCCCCEEEEHHHHHHHHHHCCCCCCCEEEEEEECCHHHCCCCCCCCCH HAKALSEVMSMIDLYRNQLPKHAVESPANQDLGTLAPESEAATSTEGEAPVPQEPVMIVE HHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC PLPEEQDSPTPEVNAPLQEPNVSQEQAKSAVTEASPAPIKAPELESKPEAKPNDGAEPQP CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC KVETEGIK CCCCCCCC >Mature Secondary Structure SLKKFTQYKLLFLMLLSLCVLLPFIPDQAYHIPGPDIAKQNFHVIEFNDQGQPHDERQW CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEEEECCCCCCCHHHHH QGLEARISQPEPAQIPELLIFVHGWHHSAEPKDENFIAFEQFYQQMAASDTQRNLLGLYI CCHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEHHHHHHHHHHHCCHHCCEEEEEE GWRGDKYDPFWLDGSDDAKSWIEPLDFPTILQRKRVAKRIGQLGLSQLLDKLDSLVTEHK ECCCCCCCCEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLRYTVIGHSLGGAVVLHASKDRIKAAIDHQQDNPNLFLLLNPAVPAKEYQPLDTLVSLD HHEEEEEECCCCCEEEEECCHHHHHHHHCCCCCCCCEEEEECCCCCCHHCCCHHHHHHHC RQKPSMVVLQSKGDFAVKEAFNYIKDGERAVGNSWAITHDIDKCSGGNCTTPMKMPSALM CCCCCEEEEECCCCHHHHHHHHHHHCCCHHCCCCEEEEECHHHCCCCCCCCCCCCCHHHH AHDQIPGCMMTLPHSGWKIRARLQARRTVQTCPDANMQAVWVLAVSDEIVSGHNGILTPD HHCCCCCEEEECCCCCCEEEEHHHHHHHHHHCCCCCCCEEEEEEECCHHHCCCCCCCCCH HAKALSEVMSMIDLYRNQLPKHAVESPANQDLGTLAPESEAATSTEGEAPVPQEPVMIVE HHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC PLPEEQDSPTPEVNAPLQEPNVSQEQAKSAVTEASPAPIKAPELESKPEAKPNDGAEPQP CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC KVETEGIK CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA