| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is 126176001
Identifier: 126176001
GI number: 126176001
Start: 4475519
End: 4475959
Strand: Direct
Name: 126176001
Synonym: Sbal_3810
Alternate gene names: NA
Gene position: 4475519-4475959 (Clockwise)
Preceding gene: 126175998
Following gene: 126176035
Centisome position: 87.29
GC content: 43.54
Gene sequence:
>441_bases ATGGCTTCATTTGTTTTATCGCATCAAAAGGAAGATGAAATGCGTAAAATTACTTTAATCTCTCTGGCCATTGGCAGCTG TTTTCTCGCCGCCTGCGCCGCAAAACCACCTATTATCGCTCAAGAAAAAACCGTTGAAATCGATGGTATTAACTTAGTTT TTGGTGGCAGTTTTGATACAGAACGCAAAAACATTTCACTCTCAGTGAATGGCGACTCTGTTATGAAAGGCACTTTCCCT CCTTATACTCCGACTCAACATTTGAGCGGCAAATACAAGGATTTCAAGATTTCTAGCCAATGCTATTTCGGCTCAGTGCT CAGCAGCCAAGGTGGCGCATTTGGCGCTATTGCCGGCGTCATTCAAGCGACTAAGTCGAGCTCAGGCGATAAGTGCGATA TGCTCGTGGATGGTAAAATTGTTGAAAGTCTCTACTTCTAA
Upstream 100 bases:
>100_bases TAATTGTTCATTTGTATTAAATTTGTTATTGGAAATGAAGCAGATATAGATATAATCTTTCGGCAAAAAATTAAACAGGG GCCGTTTAATTTGCGAAGCG
Downstream 100 bases:
>100_bases AGATTAATTCCAGAAGTACCTAAACTGCCCCTGTAAAGTACAAGACCTGTAAACACTCGCGAGATGCTCTGTCCCGCGAG TCCCATCAAAGCTGATTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MASFVLSHQKEDEMRKITLISLAIGSCFLAACAAKPPIIAQEKTVEIDGINLVFGGSFDTERKNISLSVNGDSVMKGTFP PYTPTQHLSGKYKDFKISSQCYFGSVLSSQGGAFGAIAGVIQATKSSSGDKCDMLVDGKIVESLYF
Sequences:
>Translated_146_residues MASFVLSHQKEDEMRKITLISLAIGSCFLAACAAKPPIIAQEKTVEIDGINLVFGGSFDTERKNISLSVNGDSVMKGTFP PYTPTQHLSGKYKDFKISSQCYFGSVLSSQGGAFGAIAGVIQATKSSSGDKCDMLVDGKIVESLYF >Mature_145_residues ASFVLSHQKEDEMRKITLISLAIGSCFLAACAAKPPIIAQEKTVEIDGINLVFGGSFDTERKNISLSVNGDSVMKGTFPP YTPTQHLSGKYKDFKISSQCYFGSVLSSQGGAFGAIAGVIQATKSSSGDKCDMLVDGKIVESLYF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15587; Mature: 15456
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASFVLSHQKEDEMRKITLISLAIGSCFLAACAAKPPIIAQEKTVEIDGINLVFGGSFDT CCCCCCCCCCCCHHHEEEHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEEECCCCCC ERKNISLSVNGDSVMKGTFPPYTPTQHLSGKYKDFKISSQCYFGSVLSSQGGAFGAIAGV CCCEEEEEECCCEEEECCCCCCCCCHHCCCCCCCEEECCCEEEHHHHHCCCCCHHHHHHH IQATKSSSGDKCDMLVDGKIVESLYF HHHHCCCCCCEEEEEECCHHHHHHCC >Mature Secondary Structure ASFVLSHQKEDEMRKITLISLAIGSCFLAACAAKPPIIAQEKTVEIDGINLVFGGSFDT CCCCCCCCCCCHHHEEEHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEEECCCCCC ERKNISLSVNGDSVMKGTFPPYTPTQHLSGKYKDFKISSQCYFGSVLSSQGGAFGAIAGV CCCEEEEEECCCEEEECCCCCCCCCHHCCCCCCCEEECCCEEEHHHHHCCCCCHHHHHHH IQATKSSSGDKCDMLVDGKIVESLYF HHHHCCCCCCEEEEEECCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA