| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175998
Identifier: 126175998
GI number: 126175998
Start: 4469526
End: 4472039
Strand: Direct
Name: 126175998
Synonym: Sbal_3807
Alternate gene names: NA
Gene position: 4469526-4472039 (Clockwise)
Preceding gene: 126175997
Following gene: 126176001
Centisome position: 87.17
GC content: 48.93
Gene sequence:
>2514_bases ATGCGACTTAGCAAAACGTTATCGGTATTTTCTTGGGCATTACTGGGCGCATTAGCGCTCAGTGGTTGTAACGGCGCCGC AGATGGCACCGACACTGACGGTACAGCAGACAGCTACAGCTTAACACTGGGCTATAAAACTGTAGTCAACGGCAAGTGTG CCGATACAACCACTAACTTAAGCTTTGCTTCCGATGCTAGTTTTTGTGCCGTCGCCACCTTAAAAAAAGGCTCGAGTAAA CTCAGCGGTCAGCTCGTTAGCTTCACTGCCACTTTAGGCACTGTTGCGCCTGCAACTAAACTCACCAATGCCGATGGCGT TGCCGAAGCCATCATTTCTAACCCTACGTTAACCGAAGAAGCTGGTACAGCAACGGTTAGCTATACGCCGTCAGATGCCG ACGCATTAACTGCGAGTCGTAACTACGAGTTCGTTGGTTCAGGCAGTGGCAGCACAATTGAAACGCCTAAACTCAGCGCC AGTATTTTAAATAGCTCAACCTTAGTGACTCGCTTTAAAGTCGATGAGCCGGTGCAACTGCAAGCCATATTGCTCGATAG CGAAAGCAAAGGCATCGACGGCGCGAAAGTGACGTTCACCGCTGGTTCTGCCGCGCTCAATCCTGCAAGTGCGTTGACCG ACCCTCAAGGTATTGCGCAGGTGCCCTATACGCCAAGTGCAACTGAATTAGGGGCAAACTCCCTCACAGTAACAGTGGAC TATCAAGGTCAATCGTTGCAAACCAGCAGTCTGTATGAAGTGTTGAGTAAAGACGCGGTCAATCAAGAAGGTACGCTGAA ACTCGGTTCATTCAATGGCGCTGTTTTTACCGAAGGCAAATTGACGAGTACCTTAACGGCCGATGCCAATAGCGCATATA CAATCAGCGCAGGTGGCAGCTTTGGGGTGACCGCAAGTTTAGTCTTAGAGGCCAATGACGGCACTATTACCCGAGTGCAA ACACCCTCTTCCATCAGCTTTAGCTCAGATTGCACCAGCAGTAATAGTGCGACACTCGATACCCCAGTTACGACCTTATC GGGTAATGCGAGCTCAACCTTCCAAGACACCAGTTGCAGTGGCAACAGTGAACGTAGCGACCAAATCATCGCCACGACAG TGGCCGGCAATCAGACGCTAACGGCTAATTTCCCGTTCACATTGCAACGCCAAACGCTTGCCAGCTTAAGTTTTGAGTCG GCCGAACCGGCACAAATTCGCATCAAAGGTGCGGGCGGTACGGGTTCAAGCGAATCCTCTTTAGTCAGCTTCAAAGTCAC CAGCGCCAATGGGCAACCCGCGGCGCAACAAAAGGTTAGCTTTACCTTAGACACTGTGGTTGGCGGTTTAAGTTTTGCCA ATGGCACTGCGAATGCGCAAAGCCTGACTAACTCCCAAGGTATCGCCAGTGTGCGCGTATTATCCGGCACAGTACCGACA CCAGTACGCGTAGTCGCTACTGCCGTTGACGCTGATACGAGCGAAGTCATCACTAGCCAGTCAGAGCAACTAACAGTCAA TACCGGCTTACCGCAACAGCTTGGGTTTAGTCTAGCAACTACGAATGCCAATCCTGAAGCGGGTAATGTAGATGGTGAGA AAGTCACTGTGACCGCTAGACTGTCCGATAGTTTTGGCAACCCAGCGCCAAATGACACAACAGTTAACTTTACCAGTGAA GGCGGCCAAATAGAGCCAAGCTGCTTAACCCAAAATGGGGCTTGTAGCGTTACTTGGACCTCGAGCGATCCAAGACCTCA GGACCATCGTATAACTGTGCTAGCTTATGCGTTAGGCCATGAAACCTTTTTCGATACCAATGGTAACAACCAGTTTGATT CAGCCGATGGTGGTGCAATTCTAAAAGCCTGCTTAATGAATGGCGCGCCCGTTGCCTGTCGTGGTAACGGCCTAGACGTA GAAACATTCCACAACTCAGGTTTTAGCGATATGCCGACAGCCTTTCGCGATGATAACGAAAACTTCGCCTATGATAGTGG TGAACGCTATTTCGATAACCTCGCTAGCAACACCTACAAAGGTGCCGATGGCAAGTTTAACGGTCCTCAATGTCAAGGCG CGCTCTGTGGGACAGGACAAGCCAATAAAACTTACGTCCGCAAAGCTGTCGTGATGATAATGTCTGGCTCGAAAGCGTAT TTCACAATGTGGCAAGATGGTGTCAAAGTATATGAAGATCACCAAGGTCAAAATATTCTTAACAATCTTGATTCGTTAAC GGCCATACCAGCTGGGCAAACATCCAAATTTATCGTAAAACTCTACGATAGTGCCGATCAAATTATGCCCTCTAGTACAA CGCTTAATGTAGATGCAGATAAAGGGGAATTACTGTCAACGCCTTATACTGTGCCTAAAACGAATGATGCGAATGCAAGT ATGGCGGACTTTTACCTCAAAAATACTGAAACCGCTAGCAGCCAAGTAGTGCTAACAGTGAACACACCTCGTGGTGTCCA AACCCTACTGAAGTTCAATGTTCTGCTGCAATAA
Upstream 100 bases:
>100_bases TGGCCAAAGGTCCAGAATCAAAATCATCTAAAGAGCTGTTTAAATATCTACGCAGCGAAATCCAAGACTAATTAACTTCA GCCCCACAAGGATGTTGCTT
Downstream 100 bases:
>100_bases TAGCTAATTAACACATAAGCAAAAGACCCGCGAATGCGTAATGCCGTTCACTTAAGAGTGAACGGCATTTTTCTTTGGTC TAACCGGAAACTTGTTTTTG
Product: Ig domain-containing protein
Products: NA
Alternate protein names: Ig Domain Domain Protein; Intimin/Invasin Family Protein; Invasin Domain-Containing Protein; Lipoprotein
Number of amino acids: Translated: 837; Mature: 837
Protein sequence:
>837_residues MRLSKTLSVFSWALLGALALSGCNGAADGTDTDGTADSYSLTLGYKTVVNGKCADTTTNLSFASDASFCAVATLKKGSSK LSGQLVSFTATLGTVAPATKLTNADGVAEAIISNPTLTEEAGTATVSYTPSDADALTASRNYEFVGSGSGSTIETPKLSA SILNSSTLVTRFKVDEPVQLQAILLDSESKGIDGAKVTFTAGSAALNPASALTDPQGIAQVPYTPSATELGANSLTVTVD YQGQSLQTSSLYEVLSKDAVNQEGTLKLGSFNGAVFTEGKLTSTLTADANSAYTISAGGSFGVTASLVLEANDGTITRVQ TPSSISFSSDCTSSNSATLDTPVTTLSGNASSTFQDTSCSGNSERSDQIIATTVAGNQTLTANFPFTLQRQTLASLSFES AEPAQIRIKGAGGTGSSESSLVSFKVTSANGQPAAQQKVSFTLDTVVGGLSFANGTANAQSLTNSQGIASVRVLSGTVPT PVRVVATAVDADTSEVITSQSEQLTVNTGLPQQLGFSLATTNANPEAGNVDGEKVTVTARLSDSFGNPAPNDTTVNFTSE GGQIEPSCLTQNGACSVTWTSSDPRPQDHRITVLAYALGHETFFDTNGNNQFDSADGGAILKACLMNGAPVACRGNGLDV ETFHNSGFSDMPTAFRDDNENFAYDSGERYFDNLASNTYKGADGKFNGPQCQGALCGTGQANKTYVRKAVVMIMSGSKAY FTMWQDGVKVYEDHQGQNILNNLDSLTAIPAGQTSKFIVKLYDSADQIMPSSTTLNVDADKGELLSTPYTVPKTNDANAS MADFYLKNTETASSQVVLTVNTPRGVQTLLKFNVLLQ
Sequences:
>Translated_837_residues MRLSKTLSVFSWALLGALALSGCNGAADGTDTDGTADSYSLTLGYKTVVNGKCADTTTNLSFASDASFCAVATLKKGSSK LSGQLVSFTATLGTVAPATKLTNADGVAEAIISNPTLTEEAGTATVSYTPSDADALTASRNYEFVGSGSGSTIETPKLSA SILNSSTLVTRFKVDEPVQLQAILLDSESKGIDGAKVTFTAGSAALNPASALTDPQGIAQVPYTPSATELGANSLTVTVD YQGQSLQTSSLYEVLSKDAVNQEGTLKLGSFNGAVFTEGKLTSTLTADANSAYTISAGGSFGVTASLVLEANDGTITRVQ TPSSISFSSDCTSSNSATLDTPVTTLSGNASSTFQDTSCSGNSERSDQIIATTVAGNQTLTANFPFTLQRQTLASLSFES AEPAQIRIKGAGGTGSSESSLVSFKVTSANGQPAAQQKVSFTLDTVVGGLSFANGTANAQSLTNSQGIASVRVLSGTVPT PVRVVATAVDADTSEVITSQSEQLTVNTGLPQQLGFSLATTNANPEAGNVDGEKVTVTARLSDSFGNPAPNDTTVNFTSE GGQIEPSCLTQNGACSVTWTSSDPRPQDHRITVLAYALGHETFFDTNGNNQFDSADGGAILKACLMNGAPVACRGNGLDV ETFHNSGFSDMPTAFRDDNENFAYDSGERYFDNLASNTYKGADGKFNGPQCQGALCGTGQANKTYVRKAVVMIMSGSKAY FTMWQDGVKVYEDHQGQNILNNLDSLTAIPAGQTSKFIVKLYDSADQIMPSSTTLNVDADKGELLSTPYTVPKTNDANAS MADFYLKNTETASSQVVLTVNTPRGVQTLLKFNVLLQ >Mature_837_residues MRLSKTLSVFSWALLGALALSGCNGAADGTDTDGTADSYSLTLGYKTVVNGKCADTTTNLSFASDASFCAVATLKKGSSK LSGQLVSFTATLGTVAPATKLTNADGVAEAIISNPTLTEEAGTATVSYTPSDADALTASRNYEFVGSGSGSTIETPKLSA SILNSSTLVTRFKVDEPVQLQAILLDSESKGIDGAKVTFTAGSAALNPASALTDPQGIAQVPYTPSATELGANSLTVTVD YQGQSLQTSSLYEVLSKDAVNQEGTLKLGSFNGAVFTEGKLTSTLTADANSAYTISAGGSFGVTASLVLEANDGTITRVQ TPSSISFSSDCTSSNSATLDTPVTTLSGNASSTFQDTSCSGNSERSDQIIATTVAGNQTLTANFPFTLQRQTLASLSFES AEPAQIRIKGAGGTGSSESSLVSFKVTSANGQPAAQQKVSFTLDTVVGGLSFANGTANAQSLTNSQGIASVRVLSGTVPT PVRVVATAVDADTSEVITSQSEQLTVNTGLPQQLGFSLATTNANPEAGNVDGEKVTVTARLSDSFGNPAPNDTTVNFTSE GGQIEPSCLTQNGACSVTWTSSDPRPQDHRITVLAYALGHETFFDTNGNNQFDSADGGAILKACLMNGAPVACRGNGLDV ETFHNSGFSDMPTAFRDDNENFAYDSGERYFDNLASNTYKGADGKFNGPQCQGALCGTGQANKTYVRKAVVMIMSGSKAY FTMWQDGVKVYEDHQGQNILNNLDSLTAIPAGQTSKFIVKLYDSADQIMPSSTTLNVDADKGELLSTPYTVPKTNDANAS MADFYLKNTETASSQVVLTVNTPRGVQTLLKFNVLLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86749; Mature: 86749
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51127 BIG1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLSKTLSVFSWALLGALALSGCNGAADGTDTDGTADSYSLTLGYKTVVNGKCADTTTNL CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCC SFASDASFCAVATLKKGSSKLSGQLVSFTATLGTVAPATKLTNADGVAEAIISNPTLTEE EECCCCCEEEEEEECCCCCCCCCEEEEEEEHHCCCCCCHHCCCCCHHHHHHHCCCCCCCC AGTATVSYTPSDADALTASRNYEFVGSGSGSTIETPKLSASILNSSTLVTRFKVDEPVQL CCEEEEEECCCCCHHEECCCCEEEEECCCCCEEECCCCCHHHHCCCEEEEEEECCCCCEE QAILLDSESKGIDGAKVTFTAGSAALNPASALTDPQGIAQVPYTPSATELGANSLTVTVD EEEEEECCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCEECCCCCCHHHCCCCEEEEEEE YQGQSLQTSSLYEVLSKDAVNQEGTLKLGSFNGAVFTEGKLTSTLTADANSAYTISAGGS ECCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCEEEEEEECCCCEEEEECCCC FGVTASLVLEANDGTITRVQTPSSISFSSDCTSSNSATLDTPVTTLSGNASSTFQDTSCS CCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEECCCEEEECCCCCCCCCCCCCC GNSERSDQIIATTVAGNQTLTANFPFTLQRQTLASLSFESAEPAQIRIKGAGGTGSSESS CCCCCCCEEEEEEECCCEEEEECCCEEECHHHHHHCCCCCCCCEEEEEEECCCCCCCCCE LVSFKVTSANGQPAAQQKVSFTLDTVVGGLSFANGTANAQSLTNSQGIASVRVLSGTVPT EEEEEEECCCCCCCHHHEEEEEEHHHHCCCEECCCCCCHHHHCCCCCCEEEEEECCCCCC PVRVVATAVDADTSEVITSQSEQLTVNTGLPQQLGFSLATTNANPEAGNVDGEKVTVTAR CEEEEEEEECCCHHHHHCCCCCEEEEECCCHHHHCCEEEECCCCCCCCCCCCCEEEEEEE LSDSFGNPAPNDTTVNFTSEGGQIEPSCLTQNGACSVTWTSSDPRPQDHRITVLAYALGH ECCCCCCCCCCCCEEEEECCCCEECHHHCCCCCEEEEEECCCCCCCCCCEEEEEEEEECC ETFFDTNGNNQFDSADGGAILKACLMNGAPVACRGNGLDVETFHNSGFSDMPTAFRDDNE CEEEECCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCEEEEECCCCCCCCCCHHCCCCC NFAYDSGERYFDNLASNTYKGADGKFNGPQCQGALCGTGQANKTYVRKAVVMIMSGSKAY CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHEEEEEEEEECCCEE FTMWQDGVKVYEDHQGQNILNNLDSLTAIPAGQTSKFIVKLYDSADQIMPSSTTLNVDAD EEEECCCCEEEECCCCCHHHHHHHHHEECCCCCCCEEEEEEECCHHHCCCCCEEEEEECC KGELLSTPYTVPKTNDANASMADFYLKNTETASSQVVLTVNTPRGVQTLLKFNVLLQ CCCEECCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCHHHHHHHHHHEECC >Mature Secondary Structure MRLSKTLSVFSWALLGALALSGCNGAADGTDTDGTADSYSLTLGYKTVVNGKCADTTTNL CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCC SFASDASFCAVATLKKGSSKLSGQLVSFTATLGTVAPATKLTNADGVAEAIISNPTLTEE EECCCCCEEEEEEECCCCCCCCCEEEEEEEHHCCCCCCHHCCCCCHHHHHHHCCCCCCCC AGTATVSYTPSDADALTASRNYEFVGSGSGSTIETPKLSASILNSSTLVTRFKVDEPVQL CCEEEEEECCCCCHHEECCCCEEEEECCCCCEEECCCCCHHHHCCCEEEEEEECCCCCEE QAILLDSESKGIDGAKVTFTAGSAALNPASALTDPQGIAQVPYTPSATELGANSLTVTVD EEEEEECCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCEECCCCCCHHHCCCCEEEEEEE YQGQSLQTSSLYEVLSKDAVNQEGTLKLGSFNGAVFTEGKLTSTLTADANSAYTISAGGS ECCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCEEEEEEECCCCEEEEECCCC FGVTASLVLEANDGTITRVQTPSSISFSSDCTSSNSATLDTPVTTLSGNASSTFQDTSCS CCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEECCCEEEECCCCCCCCCCCCCC GNSERSDQIIATTVAGNQTLTANFPFTLQRQTLASLSFESAEPAQIRIKGAGGTGSSESS CCCCCCCEEEEEEECCCEEEEECCCEEECHHHHHHCCCCCCCCEEEEEEECCCCCCCCCE LVSFKVTSANGQPAAQQKVSFTLDTVVGGLSFANGTANAQSLTNSQGIASVRVLSGTVPT EEEEEEECCCCCCCHHHEEEEEEHHHHCCCEECCCCCCHHHHCCCCCCEEEEEECCCCCC PVRVVATAVDADTSEVITSQSEQLTVNTGLPQQLGFSLATTNANPEAGNVDGEKVTVTAR CEEEEEEEECCCHHHHHCCCCCEEEEECCCHHHHCCEEEECCCCCCCCCCCCCEEEEEEE LSDSFGNPAPNDTTVNFTSEGGQIEPSCLTQNGACSVTWTSSDPRPQDHRITVLAYALGH ECCCCCCCCCCCCEEEEECCCCEECHHHCCCCCEEEEEECCCCCCCCCCEEEEEEEEECC ETFFDTNGNNQFDSADGGAILKACLMNGAPVACRGNGLDVETFHNSGFSDMPTAFRDDNE CEEEECCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCEEEEECCCCCCCCCCHHCCCCC NFAYDSGERYFDNLASNTYKGADGKFNGPQCQGALCGTGQANKTYVRKAVVMIMSGSKAY CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHEEEEEEEEECCCEE FTMWQDGVKVYEDHQGQNILNNLDSLTAIPAGQTSKFIVKLYDSADQIMPSSTTLNVDAD EEEECCCCEEEECCCCCHHHHHHHHHEECCCCCCCEEEEEEECCHHHCCCCCEEEEEECC KGELLSTPYTVPKTNDANASMADFYLKNTETASSQVVLTVNTPRGVQTLLKFNVLLQ CCCEECCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA