Definition Shewanella baltica OS155 chromosome, complete genome.
Accession NC_009052
Length 5,127,376

Click here to switch to the map view.

The map label for this gene is yjgA [C]

Identifier: 126175997

GI number: 126175997

Start: 4468960

End: 4469496

Strand: Direct

Name: yjgA [C]

Synonym: Sbal_3806

Alternate gene names: 126175997

Gene position: 4468960-4469496 (Clockwise)

Preceding gene: 126175995

Following gene: 126175998

Centisome position: 87.16

GC content: 42.46

Gene sequence:

>537_bases
ATGAAGATTGTTGGTGATTCAGAACATTTTAAACAGCCCTACGACATAGATGAAGATTATGTCAGCAGCAAAACAACGGA
CAAGCGCGACAGCGAAGCCGTGCAAAAAGTCGGTATGGAGCTTGTTTCACTGAGCAAGACTCAGCTAGATAAAATCGAGC
TGGATGAGTTTTTGTACGACGCTATCCTGCAAACACGCAAAATCAAGGTCAATACTGAGGCGTATCGTCGCCACATGCAG
TATATCGGCAAATTGATGCGTAATTTTGATATTGAGCCTATCAAGGCCTCACTCGCTATCGTGTTGAATAAAAACAACAA
CGAAACTGCGAAGTTGCAGATGTTCGAAAAAATGCGTGAACGCTTACTCACCCAAGGTGATGATGAAATTCAAACCTTAG
TCGAGCATTATCCGCAATTAGACAGACAAAAACTGCGTACTTTGGTGCGTCAAGCCACCAAAGAACTGGCCAAAGGTCCA
GAATCAAAATCATCTAAAGAGCTGTTTAAATATCTACGCAGCGAAATCCAAGACTAA

Upstream 100 bases:

>100_bases
CTCGTATCTTCAGGTAGCTTGGGTATAAGCACATTCACCTAGGCGATTTTTGGCTGGAGATGTTATTATTAACCAGTAAA
TTACTTGAGGTTTTATCTAT

Downstream 100 bases:

>100_bases
TTAACTTCAGCCCCACAAGGATGTTGCTTATGCGACTTAGCAAAACGTTATCGGTATTTTCTTGGGCATTACTGGGCGCA
TTAGCGCTCAGTGGTTGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MKIVGDSEHFKQPYDIDEDYVSSKTTDKRDSEAVQKVGMELVSLSKTQLDKIELDEFLYDAILQTRKIKVNTEAYRRHMQ
YIGKLMRNFDIEPIKASLAIVLNKNNNETAKLQMFEKMRERLLTQGDDEIQTLVEHYPQLDRQKLRTLVRQATKELAKGP
ESKSSKELFKYLRSEIQD

Sequences:

>Translated_178_residues
MKIVGDSEHFKQPYDIDEDYVSSKTTDKRDSEAVQKVGMELVSLSKTQLDKIELDEFLYDAILQTRKIKVNTEAYRRHMQ
YIGKLMRNFDIEPIKASLAIVLNKNNNETAKLQMFEKMRERLLTQGDDEIQTLVEHYPQLDRQKLRTLVRQATKELAKGP
ESKSSKELFKYLRSEIQD
>Mature_178_residues
MKIVGDSEHFKQPYDIDEDYVSSKTTDKRDSEAVQKVGMELVSLSKTQLDKIELDEFLYDAILQTRKIKVNTEAYRRHMQ
YIGKLMRNFDIEPIKASLAIVLNKNNNETAKLQMFEKMRERLLTQGDDEIQTLVEHYPQLDRQKLRTLVRQATKELAKGP
ESKSSKELFKYLRSEIQD

Specific function: Unknown

COG id: COG3028

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0307 family [H]

Homologues:

Organism=Escherichia coli, GI1790681, Length=151, Percent_Identity=42.3841059602649, Blast_Score=122, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023153
- InterPro:   IPR006839 [H]

Pfam domain/function: PF04751 DUF615 [H]

EC number: NA

Molecular weight: Translated: 20903; Mature: 20903

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIVGDSEHFKQPYDIDEDYVSSKTTDKRDSEAVQKVGMELVSLSKTQLDKIELDEFLYD
CCCCCCHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AILQTRKIKVNTEAYRRHMQYIGKLMRNFDIEPIKASLAIVLNKNNNETAKLQMFEKMRE
HHHHHHHHEECHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEECCCCCHHHHHHHHHHHH
RLLTQGDDEIQTLVEHYPQLDRQKLRTLVRQATKELAKGPESKSSKELFKYLRSEIQD
HHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIVGDSEHFKQPYDIDEDYVSSKTTDKRDSEAVQKVGMELVSLSKTQLDKIELDEFLYD
CCCCCCHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AILQTRKIKVNTEAYRRHMQYIGKLMRNFDIEPIKASLAIVLNKNNNETAKLQMFEKMRE
HHHHHHHHEECHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEECCCCCHHHHHHHHHHHH
RLLTQGDDEIQTLVEHYPQLDRQKLRTLVRQATKELAKGPESKSSKELFKYLRSEIQD
HHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA