Definition Shewanella baltica OS155 chromosome, complete genome.
Accession NC_009052
Length 5,127,376

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The map label for this gene is 126175995

Identifier: 126175995

GI number: 126175995

Start: 4464810

End: 4466951

Strand: Direct

Name: 126175995

Synonym: Sbal_3804

Alternate gene names: NA

Gene position: 4464810-4466951 (Clockwise)

Preceding gene: 126175994

Following gene: 126175997

Centisome position: 87.08

GC content: 49.63

Gene sequence:

>2142_bases
ATGGAAGACTATAAGATGGCTGCAAATTCTGCGTATTTATCTCACCCGTTTAAAACTTCAGTAATTTCCTCATCCCTCGC
AATCGCCATGGGCTTATCGTTAGCACCGCAGGCAATGGCCGATGACAGCGAGTTAGCCAATATTGAACGCTTAGAAGTCC
ACGGCCAACAGACCGAAAACCGCAACACGTTAGGTTCGGCTGAAAACCTGCTGAAAGGACAAGGAGTAGATTTCTCCGAA
GCGGGTGGCGTATCAGCTCTGCCTATTCTCAATGGCATGATGGGCGATCGCATCAAAGTGTTAGTTGATGGTGCGGACAT
TACCGCTTCCTGCGCCAATCAAATGAATCCACCACTGTCCTATATTTCCGCTAATCAAATCACCACAGCCGAAGTGATCG
CGGGTGTATCGCCAGTCAGTGCGGGTGGCGACAATATCGCGGGTGTAATCAAGGTCAGCAGCCTTAATCCTAAATTTGGC
GAAAGCGATAGCATCAAGTGGAATCGCGGCGATATCTCAACGGGATACCGCAGTGTGAGTGATACCTTGTTACTGGGCAC
CAATGCCACAGTTGCCAGCAAAAATATCAGCCTAAGCTATCAAGGCGCCTATGAAGATGCCAACAGCTATAAAGATGGCA
ATGGCGATAAAGTCATCGATACCTTGTACCGCGCCCAAAACCACGCATTGACCGCCGCATGGCGCGATGAGACTCAACAA
GTTGCCATCAAACTAACCCATCAAAATATTCCATTCCAAGGTTTTGCTAACCAATACATGGATATGACAGATAACAAGAG
TTACGGTGCCCTCGCCCGTTATCAACTTAAACTCGACGATGACGGCGAGTTCAGCGCCCAATTCAATTGGCACGGCGTGA
AGCACGAGATGGGCTTTTTCACCCCAGAAAAAACCGGCAAGATGCCGATGAACACTGAAGGTGACGACTACAGCTATCAA
CTGCACTGGCGCTTGCCAATGGGCGATGACAGCACCTTACTGGTCGGCCAAGAATTCTATAGCTACCAGCTCGACGATGT
GTGGCCTGCGGTGCCAGGCACTATGATGGCGCCGAATGATTACATCAACATCAACGATGGCGAACGTCGCCGCGCCGCCG
TTTATGGCGAATGGCAGCAAGATTTGAGCCCAAGCTGGTGGTTATCGGCGGGTGTTCGCTTTGAGTATGTCACCACTAAT
ACAGGTGAAGTCCAAGCTTATAGCAACATGCCTATGATGGGCATGCCCAATGTCGACGCAGAAGCGGCAAAAGCCTTTAA
TGCGATGGACAGAGAGCGTAATGATGATCTGATCGACGCCACCTTACTGGCGCGCTATCAATTATCGGCCAATCAACAAC
TTGAGTTTGGCCTTGCCCGCAAGAATCGAGCCCCCAATCTGTACGAGCGTTACAGCTGGGGTCGCGGCACTATGGCAACC
ACTATGATAGGTTGGTATGGCGATGGTAATGGTTATGTGGGTAATCCAGATCTAAAGCCAGAAACCGCCCACACCCTGAG
CGCAGCCTACAAATATAACGGTGATAGCTGGCAAGTCTCGACCACAGCTTGGTACACAGCGGTGACTAACTATATCGATG
CCGAAGTGATTGGTAGCTTCAATCGCACTAGCTCAGCTGATGGCAAACGCAATATTCTTCAATTCACTAACTTAGATGCC
AATCTCTATGGTGCACGTTTTAATGCGCTCTATCAGTTTGCCGAAACCAGCACAGGTAAATGGCAAGTGTTAGGTAAAGT
GAATGTGACCCGTGGTGAGCGAGATGAAGGCAATGAGCCTTTATATCAAATCAAGCCGCTACAAACTGAGCTGGCACTGC
AACATCAACTCGGTAACTGGGAAAACAGCCTTTCATGGCAATGGGTTGCGACCAAAGATCGCGTGGATGACCGCCGCCTT
GAAAATGAAACCGATAGCTACTCCTTGCTTAACTTAAACAGCAGCATGAAATGGCAGGATCTGACTGTCACCTTCGCGGT
GAATAACCTATTCGACAGCTACTATGAGCTGCCACTGGGCGGTGTGAGTGTGGCGGAATTTAAGGCCGATAATACCAATG
GCTTTAAGCAGATTGCCGGTGCAGGCCGCTCGTTCGAACTCAGCGCAAGCTATGCGTTTTAA

Upstream 100 bases:

>100_bases
TCAATTCTGTTTTTAACCCGCTTTGTTGCCCTCTGCGACAATATGCCGCACCTGTCACTCTTAGATGCTCTTTATAATGC
AGCGCAATTAATCCAAGTGA

Downstream 100 bases:

>100_bases
CGACTGATTTTAACCACATAGTTTTTAACCACATGGTTTTTAACGACACGGCTTTTTAGGTCGAGCAGCTCTAAATCCAA
ACGTTAAACAAAAAGGGCAA

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Copper Receptor; NB Dependent Receptor; NB-Dependent Receptor Protein; Outer Membrane Receptor Protein; Outer Membrane Protein C; NB-Dependent Receptor Plug; Nb-Dependent Receptor; NB-Dependent Receptor Domain Protein; Outer Membrane Protein; NB-Dependent Outer Membrane Receptor; Outer Membrane Insertion C-Terminal Signal; Outer Membrane Copper Receptor OprC; IMP Dehydrogenase/GMP Reductase; Outer Membrane Protein NosA; NB-Dependent Copper Receptor Protein; Iron Complex Outermembrane Recepter Protein; NB-Dependent Receptor Domain-Containing Protein; Nb-Dependent Copper Receptor; Outer Membrane Receptor Proteins

Number of amino acids: Translated: 713; Mature: 713

Protein sequence:

>713_residues
MEDYKMAANSAYLSHPFKTSVISSSLAIAMGLSLAPQAMADDSELANIERLEVHGQQTENRNTLGSAENLLKGQGVDFSE
AGGVSALPILNGMMGDRIKVLVDGADITASCANQMNPPLSYISANQITTAEVIAGVSPVSAGGDNIAGVIKVSSLNPKFG
ESDSIKWNRGDISTGYRSVSDTLLLGTNATVASKNISLSYQGAYEDANSYKDGNGDKVIDTLYRAQNHALTAAWRDETQQ
VAIKLTHQNIPFQGFANQYMDMTDNKSYGALARYQLKLDDDGEFSAQFNWHGVKHEMGFFTPEKTGKMPMNTEGDDYSYQ
LHWRLPMGDDSTLLVGQEFYSYQLDDVWPAVPGTMMAPNDYININDGERRRAAVYGEWQQDLSPSWWLSAGVRFEYVTTN
TGEVQAYSNMPMMGMPNVDAEAAKAFNAMDRERNDDLIDATLLARYQLSANQQLEFGLARKNRAPNLYERYSWGRGTMAT
TMIGWYGDGNGYVGNPDLKPETAHTLSAAYKYNGDSWQVSTTAWYTAVTNYIDAEVIGSFNRTSSADGKRNILQFTNLDA
NLYGARFNALYQFAETSTGKWQVLGKVNVTRGERDEGNEPLYQIKPLQTELALQHQLGNWENSLSWQWVATKDRVDDRRL
ENETDSYSLLNLNSSMKWQDLTVTFAVNNLFDSYYELPLGGVSVAEFKADNTNGFKQIAGAGRSFELSASYAF

Sequences:

>Translated_713_residues
MEDYKMAANSAYLSHPFKTSVISSSLAIAMGLSLAPQAMADDSELANIERLEVHGQQTENRNTLGSAENLLKGQGVDFSE
AGGVSALPILNGMMGDRIKVLVDGADITASCANQMNPPLSYISANQITTAEVIAGVSPVSAGGDNIAGVIKVSSLNPKFG
ESDSIKWNRGDISTGYRSVSDTLLLGTNATVASKNISLSYQGAYEDANSYKDGNGDKVIDTLYRAQNHALTAAWRDETQQ
VAIKLTHQNIPFQGFANQYMDMTDNKSYGALARYQLKLDDDGEFSAQFNWHGVKHEMGFFTPEKTGKMPMNTEGDDYSYQ
LHWRLPMGDDSTLLVGQEFYSYQLDDVWPAVPGTMMAPNDYININDGERRRAAVYGEWQQDLSPSWWLSAGVRFEYVTTN
TGEVQAYSNMPMMGMPNVDAEAAKAFNAMDRERNDDLIDATLLARYQLSANQQLEFGLARKNRAPNLYERYSWGRGTMAT
TMIGWYGDGNGYVGNPDLKPETAHTLSAAYKYNGDSWQVSTTAWYTAVTNYIDAEVIGSFNRTSSADGKRNILQFTNLDA
NLYGARFNALYQFAETSTGKWQVLGKVNVTRGERDEGNEPLYQIKPLQTELALQHQLGNWENSLSWQWVATKDRVDDRRL
ENETDSYSLLNLNSSMKWQDLTVTFAVNNLFDSYYELPLGGVSVAEFKADNTNGFKQIAGAGRSFELSASYAF
>Mature_713_residues
MEDYKMAANSAYLSHPFKTSVISSSLAIAMGLSLAPQAMADDSELANIERLEVHGQQTENRNTLGSAENLLKGQGVDFSE
AGGVSALPILNGMMGDRIKVLVDGADITASCANQMNPPLSYISANQITTAEVIAGVSPVSAGGDNIAGVIKVSSLNPKFG
ESDSIKWNRGDISTGYRSVSDTLLLGTNATVASKNISLSYQGAYEDANSYKDGNGDKVIDTLYRAQNHALTAAWRDETQQ
VAIKLTHQNIPFQGFANQYMDMTDNKSYGALARYQLKLDDDGEFSAQFNWHGVKHEMGFFTPEKTGKMPMNTEGDDYSYQ
LHWRLPMGDDSTLLVGQEFYSYQLDDVWPAVPGTMMAPNDYININDGERRRAAVYGEWQQDLSPSWWLSAGVRFEYVTTN
TGEVQAYSNMPMMGMPNVDAEAAKAFNAMDRERNDDLIDATLLARYQLSANQQLEFGLARKNRAPNLYERYSWGRGTMAT
TMIGWYGDGNGYVGNPDLKPETAHTLSAAYKYNGDSWQVSTTAWYTAVTNYIDAEVIGSFNRTSSADGKRNILQFTNLDA
NLYGARFNALYQFAETSTGKWQVLGKVNVTRGERDEGNEPLYQIKPLQTELALQHQLGNWENSLSWQWVATKDRVDDRRL
ENETDSYSLLNLNSSMKWQDLTVTFAVNNLFDSYYELPLGGVSVAEFKADNTNGFKQIAGAGRSFELSASYAF

Specific function: Unknown

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 78945; Mature: 78945

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDYKMAANSAYLSHPFKTSVISSSLAIAMGLSLAPQAMADDSELANIERLEVHGQQTEN
CCCHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCHHHCCEEEEEECCCCCCC
RNTLGSAENLLKGQGVDFSEAGGVSALPILNGMMGDRIKVLVDGADITASCANQMNPPLS
CCCCCCHHHHHHCCCCCHHHCCCEEEHHHHHCCCCCEEEEEEECCCCHHHHHHCCCCCHH
YISANQITTAEVIAGVSPVSAGGDNIAGVIKVSSLNPKFGESDSIKWNRGDISTGYRSVS
HEECCCCCHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCC
DTLLLGTNATVASKNISLSYQGAYEDANSYKDGNGDKVIDTLYRAQNHALTAAWRDETQQ
CEEEEECCCEEEECCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCEE
VAIKLTHQNIPFQGFANQYMDMTDNKSYGALARYQLKLDDDGEFSAQFNWHGVKHEMGFF
EEEEEEECCCCCCHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCHHCCCC
TPEKTGKMPMNTEGDDYSYQLHWRLPMGDDSTLLVGQEFYSYQLDDVWPAVPGTMMAPND
CCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECHHHEEECCCCCCCCCCCEECCCC
YININDGERRRAAVYGEWQQDLSPSWWLSAGVRFEYVTTNTGEVQAYSNMPMMGMPNVDA
EEECCCCCCEEEEEECCHHHCCCCCEEEECCCEEEEEECCCCCEEEECCCCCCCCCCCCH
EAAKAFNAMDRERNDDLIDATLLARYQLSANQQLEFGLARKNRAPNLYERYSWGRGTMAT
HHHHHHHHHHCCCCCCHHHHHHHEEEECCCCCEEEEEHHHCCCCCCHHHHHCCCCCCEEE
TMIGWYGDGNGYVGNPDLKPETAHTLSAAYKYNGDSWQVSTTAWYTAVTNYIDAEVIGSF
EEEEEEECCCCCCCCCCCCCCHHHHEEEEEEECCCCEEEEHHHHHHHHHHHHCHHHHCCC
NRTSSADGKRNILQFTNLDANLYGARFNALYQFAETSTGKWQVLGKVNVTRGERDEGNEP
CCCCCCCCCCCEEEEECCCCEEEHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCC
LYQIKPLQTELALQHQLGNWENSLSWQWVATKDRVDDRRLENETDSYSLLNLNSSMKWQD
EEEEECCHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCCCCEEEEECCCCCCEEE
LTVTFAVNNLFDSYYELPLGGVSVAEFKADNTNGFKQIAGAGRSFELSASYAF
EEEEEEEHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHCCCCCEEEEEECCC
>Mature Secondary Structure
MEDYKMAANSAYLSHPFKTSVISSSLAIAMGLSLAPQAMADDSELANIERLEVHGQQTEN
CCCHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCHHHCCEEEEEECCCCCCC
RNTLGSAENLLKGQGVDFSEAGGVSALPILNGMMGDRIKVLVDGADITASCANQMNPPLS
CCCCCCHHHHHHCCCCCHHHCCCEEEHHHHHCCCCCEEEEEEECCCCHHHHHHCCCCCHH
YISANQITTAEVIAGVSPVSAGGDNIAGVIKVSSLNPKFGESDSIKWNRGDISTGYRSVS
HEECCCCCHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCC
DTLLLGTNATVASKNISLSYQGAYEDANSYKDGNGDKVIDTLYRAQNHALTAAWRDETQQ
CEEEEECCCEEEECCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCEE
VAIKLTHQNIPFQGFANQYMDMTDNKSYGALARYQLKLDDDGEFSAQFNWHGVKHEMGFF
EEEEEEECCCCCCHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCHHCCCC
TPEKTGKMPMNTEGDDYSYQLHWRLPMGDDSTLLVGQEFYSYQLDDVWPAVPGTMMAPND
CCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECHHHEEECCCCCCCCCCCEECCCC
YININDGERRRAAVYGEWQQDLSPSWWLSAGVRFEYVTTNTGEVQAYSNMPMMGMPNVDA
EEECCCCCCEEEEEECCHHHCCCCCEEEECCCEEEEEECCCCCEEEECCCCCCCCCCCCH
EAAKAFNAMDRERNDDLIDATLLARYQLSANQQLEFGLARKNRAPNLYERYSWGRGTMAT
HHHHHHHHHHCCCCCCHHHHHHHEEEECCCCCEEEEEHHHCCCCCCHHHHHCCCCCCEEE
TMIGWYGDGNGYVGNPDLKPETAHTLSAAYKYNGDSWQVSTTAWYTAVTNYIDAEVIGSF
EEEEEEECCCCCCCCCCCCCCHHHHEEEEEEECCCCEEEEHHHHHHHHHHHHCHHHHCCC
NRTSSADGKRNILQFTNLDANLYGARFNALYQFAETSTGKWQVLGKVNVTRGERDEGNEP
CCCCCCCCCCCEEEEECCCCEEEHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCC
LYQIKPLQTELALQHQLGNWENSLSWQWVATKDRVDDRRLENETDSYSLLNLNSSMKWQD
EEEEECCHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCCCCEEEEECCCCCCEEE
LTVTFAVNNLFDSYYELPLGGVSVAEFKADNTNGFKQIAGAGRSFELSASYAF
EEEEEEEHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA