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The map label for this gene is secF [H]

Identifier: 126175449

GI number: 126175449

Start: 3809160

End: 3810062

Strand: Reverse

Name: secF [H]

Synonym: Sbal_3249

Alternate gene names: 126175449

Gene position: 3810062-3809160 (Counterclockwise)

Preceding gene: 126175450

Following gene: 126175447

Centisome position: 74.31

GC content: 46.18

Gene sequence:

>903_bases
ATGAAAAATATCAATCTAACAAAATGGCGTTATGTTTCCAGTGCTATCTCAATTTTATTGATGATAACGTCATTAGCCAT
CATAGGTGTAAAGGGTTTTAACTGGGGATTAGACTTTACCGGTGGTGTGGTGACTGAGGTTCAGCTCGATAGAAAAATCA
CCAGCAGTGAGTTACAACCTTTGCTTAACGCTGCCTATCAGCAGGAAGTCTCTGTGATCTCGGCCAGTGAGCCGGGCCGT
TGGGTACTGCGCTATGGTGATATAAAGAGTGCTGATACTGAGCAAAGCAATGTCGATATTCAGCAGGCATTAGCGCCACT
TAACTCTGAAGTGCAAGTCCTTAACAGCAGCGTTGTTGGGCCGCAGATTGGTCAAGAACTGGCGGAGCAGGGCGGGTTAG
CGCTGTTAGTCGCTATGCTGTGTATTTTAGGCTATTTAAGTTATCGCTTCGAGTGGCGACTCGCATCGGGTGCTTTGTTT
GCGCTAGTGCACGACGTCGTCTTCGTACTGGCGTTTTTTGCGCTGACGCAGATGGAGTTTAATTTAACGGTACTGGCGGC
TGTGCTGGCGATTTTAGGCTATTCGTTAAATGACTCGATTATCATTGCTGACCGTATCCGTGAATTATTGATTGCTAAAC
CAAAGCTTGCGATTCAAGAAATTAATAACCAAGCGATTGTGGCGACATTCTCCCGTACTATGGTGACGTCAGGGACAACC
TTAATGACGGTCGGTGCGCTGTGGATCATGGGTGGCGGGCCGCTGGAAGGATTCTCGATTGCGATGTTTATCGGTATTTT
AACCGGTACATTCTCATCAATTTCTGTTGGCACCTCATTGCCTGAGTTGTTAGGTTTAACGCCTGAGCATTATAAGGAAC
AAGTGATTTCTGATATGCCTTAG

Upstream 100 bases:

>100_bases
TAGGTCTGTTGACCAGCATGTTTACCGGTATCTTTGCTTCAAGAGCCTTGATTAACTTAGTTTATGGACGTGATGCTAGT
CGTCATGTGAGGGTATAACC

Downstream 100 bases:

>100_bases
TGCTTTATTTTAATTTGTAGTAAAAACAAAGAGGCCACTCAATTGAGTGGCCTCTTTGTTAACACAATAAAAATCAAGAA
AAATTACTTTGCCTTTGGCA

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MKNINLTKWRYVSSAISILLMITSLAIIGVKGFNWGLDFTGGVVTEVQLDRKITSSELQPLLNAAYQQEVSVISASEPGR
WVLRYGDIKSADTEQSNVDIQQALAPLNSEVQVLNSSVVGPQIGQELAEQGGLALLVAMLCILGYLSYRFEWRLASGALF
ALVHDVVFVLAFFALTQMEFNLTVLAAVLAILGYSLNDSIIIADRIRELLIAKPKLAIQEINNQAIVATFSRTMVTSGTT
LMTVGALWIMGGGPLEGFSIAMFIGILTGTFSSISVGTSLPELLGLTPEHYKEQVISDMP

Sequences:

>Translated_300_residues
MKNINLTKWRYVSSAISILLMITSLAIIGVKGFNWGLDFTGGVVTEVQLDRKITSSELQPLLNAAYQQEVSVISASEPGR
WVLRYGDIKSADTEQSNVDIQQALAPLNSEVQVLNSSVVGPQIGQELAEQGGLALLVAMLCILGYLSYRFEWRLASGALF
ALVHDVVFVLAFFALTQMEFNLTVLAAVLAILGYSLNDSIIIADRIRELLIAKPKLAIQEINNQAIVATFSRTMVTSGTT
LMTVGALWIMGGGPLEGFSIAMFIGILTGTFSSISVGTSLPELLGLTPEHYKEQVISDMP
>Mature_300_residues
MKNINLTKWRYVSSAISILLMITSLAIIGVKGFNWGLDFTGGVVTEVQLDRKITSSELQPLLNAAYQQEVSVISASEPGR
WVLRYGDIKSADTEQSNVDIQQALAPLNSEVQVLNSSVVGPQIGQELAEQGGLALLVAMLCILGYLSYRFEWRLASGALF
ALVHDVVFVLAFFALTQMEFNLTVLAAVLAILGYSLNDSIIIADRIRELLIAKPKLAIQEINNQAIVATFSRTMVTSGTT
LMTVGALWIMGGGPLEGFSIAMFIGILTGTFSSISVGTSLPELLGLTPEHYKEQVISDMP

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=308, Percent_Identity=38.3116883116883, Blast_Score=208, Evalue=4e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 32474; Mature: 32474

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNINLTKWRYVSSAISILLMITSLAIIGVKGFNWGLDFTGGVVTEVQLDRKITSSELQP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHH
LLNAAYQQEVSVISASEPGRWVLRYGDIKSADTEQSNVDIQQALAPLNSEVQVLNSSVVG
HHHHHHHHHHHEEECCCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCHHHHHHHCCCCC
PQIGQELAEQGGLALLVAMLCILGYLSYRFEWRLASGALFALVHDVVFVLAFFALTQMEF
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHC
NLTVLAAVLAILGYSLNDSIIIADRIRELLIAKPKLAIQEINNQAIVATFSRTMVTSGTT
HHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCCHHHHHCCCCEEEEEEHHHHHCCCCH
LMTVGALWIMGGGPLEGFSIAMFIGILTGTFSSISVGTSLPELLGLTPEHYKEQVISDMP
HHHHHHHHEECCCCCCHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKNINLTKWRYVSSAISILLMITSLAIIGVKGFNWGLDFTGGVVTEVQLDRKITSSELQP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHH
LLNAAYQQEVSVISASEPGRWVLRYGDIKSADTEQSNVDIQQALAPLNSEVQVLNSSVVG
HHHHHHHHHHHEEECCCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCHHHHHHHCCCCC
PQIGQELAEQGGLALLVAMLCILGYLSYRFEWRLASGALFALVHDVVFVLAFFALTQMEF
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHC
NLTVLAAVLAILGYSLNDSIIIADRIRELLIAKPKLAIQEINNQAIVATFSRTMVTSGTT
HHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCCHHHHHCCCCEEEEEEHHHHHCCCCH
LMTVGALWIMGGGPLEGFSIAMFIGILTGTFSSISVGTSLPELLGLTPEHYKEQVISDMP
HHHHHHHHEECCCCCCHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]