| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is 126175423
Identifier: 126175423
GI number: 126175423
Start: 3778011
End: 3779045
Strand: Direct
Name: 126175423
Synonym: Sbal_3223
Alternate gene names: NA
Gene position: 3778011-3779045 (Clockwise)
Preceding gene: 126175420
Following gene: 126175435
Centisome position: 73.68
GC content: 45.99
Gene sequence:
>1035_bases GTGTTATATCTTAAAGGGCTAAAGAAAAGCCATAAAATCAGTAGACTGATCCAAATTGCCGCCGCCTTCGCCTTGATATT CGGCTTAGTACAATTGTGGCAGACAAGCCTACTACAAGGTCAGCTGCTTCTAAAGTCCCAAACTCAAAAGATGGCCAGAT TACTGGTACAGCAAACCGCTTATGGTGCAGCGCCCGCGCTACAACTGCAAAATGATGAGCAGTTGCAATGGCTCGCCAGC GCTTTAGTGGAAGATCCTAAGGTGATGTCTGCGGCTATCTTCAGCGACCAAGGCATGCGGTTATCCTTCGCCCAAAGTAT CACTAAGGATGTTGTCGATCCTGACTCCGAAGAAATGAATTTGCTACTAAGCAAATATCCTCCCTATGTTGAGCCTGTGA TCCAAGAAGGGAAAAATCTAGGTTATGTCGAAGTCAGGCTCGATACCAAGTTGTTCTTCAACGAAATCAAAGAAGCCCAC AACTTAAACATGGAACAACAGCAAATCATGCTGCTGGTTGCAGGTTTGATTGGTATGTTGCTTTCGCGCTCTTTGTCTTT CAAACGCGCCGATTTTGACCGCCGCCGCTTTCGGGTTAAATTGCGTCAATCGCCGAAAAAATCTAAGAAAAAATCCTCAG CTGAAGAGCCATCTGAAAGTGCGAGTGATAGATCAGCGCAAGTGCTAACCGAAGATCAACCTATGTCGACCACTGATCAT CCACAAGAGAAAGCGGCTAAATCCACTAAGGCGCCAAAAGCAGTAACAGAGACCAGTGTCGATAAGCACACTCAGACCAG CGTGCAAACTAAGACCGAAAAAACGTCAGAAAAATCATTGGAGTTACAGAATAATACAGCAGTGAAAAACGCGACAAACG ATGCGGAACAAGCGGCACCTGTAAAGGTTAAACCTAAGGTTAAAAGTGTCCGTCAGGTAAAACACGCGACTAAAGCAACA GCCGTTACGGCCGAAACCTCGACGCCAAAAACACCCAGCGAGTCAAGCGATCTCGACACAGATTTAACAGGTTAA
Upstream 100 bases:
>100_bases ATCTTGGTTCAAGCTTTCCATCGGACTTAAATTCTCCAACTATCGGGCTCACTCAGAATCAATTATGATTAGGCAAGCGC TCTACATTTTAAGGGTCAAA
Downstream 100 bases:
>100_bases TCTCTATCTCAATAGATAGGAAGATAGGACAACTCATCTATTGATAGCTAGGTTCTAGATAAGCCATAAACAACCAGTTT CTAATAACCAAGCCATAAAT
Product: membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MLYLKGLKKSHKISRLIQIAAAFALIFGLVQLWQTSLLQGQLLLKSQTQKMARLLVQQTAYGAAPALQLQNDEQLQWLAS ALVEDPKVMSAAIFSDQGMRLSFAQSITKDVVDPDSEEMNLLLSKYPPYVEPVIQEGKNLGYVEVRLDTKLFFNEIKEAH NLNMEQQQIMLLVAGLIGMLLSRSLSFKRADFDRRRFRVKLRQSPKKSKKKSSAEEPSESASDRSAQVLTEDQPMSTTDH PQEKAAKSTKAPKAVTETSVDKHTQTSVQTKTEKTSEKSLELQNNTAVKNATNDAEQAAPVKVKPKVKSVRQVKHATKAT AVTAETSTPKTPSESSDLDTDLTG
Sequences:
>Translated_344_residues MLYLKGLKKSHKISRLIQIAAAFALIFGLVQLWQTSLLQGQLLLKSQTQKMARLLVQQTAYGAAPALQLQNDEQLQWLAS ALVEDPKVMSAAIFSDQGMRLSFAQSITKDVVDPDSEEMNLLLSKYPPYVEPVIQEGKNLGYVEVRLDTKLFFNEIKEAH NLNMEQQQIMLLVAGLIGMLLSRSLSFKRADFDRRRFRVKLRQSPKKSKKKSSAEEPSESASDRSAQVLTEDQPMSTTDH PQEKAAKSTKAPKAVTETSVDKHTQTSVQTKTEKTSEKSLELQNNTAVKNATNDAEQAAPVKVKPKVKSVRQVKHATKAT AVTAETSTPKTPSESSDLDTDLTG >Mature_344_residues MLYLKGLKKSHKISRLIQIAAAFALIFGLVQLWQTSLLQGQLLLKSQTQKMARLLVQQTAYGAAPALQLQNDEQLQWLAS ALVEDPKVMSAAIFSDQGMRLSFAQSITKDVVDPDSEEMNLLLSKYPPYVEPVIQEGKNLGYVEVRLDTKLFFNEIKEAH NLNMEQQQIMLLVAGLIGMLLSRSLSFKRADFDRRRFRVKLRQSPKKSKKKSSAEEPSESASDRSAQVLTEDQPMSTTDH PQEKAAKSTKAPKAVTETSVDKHTQTSVQTKTEKTSEKSLELQNNTAVKNATNDAEQAAPVKVKPKVKSVRQVKHATKAT AVTAETSTPKTPSESSDLDTDLTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38140; Mature: 38140
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYLKGLKKSHKISRLIQIAAAFALIFGLVQLWQTSLLQGQLLLKSQTQKMARLLVQQTA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YGAAPALQLQNDEQLQWLASALVEDPKVMSAAIFSDQGMRLSFAQSITKDVVDPDSEEMN CCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHH LLLSKYPPYVEPVIQEGKNLGYVEVRLDTKLFFNEIKEAHNLNMEQQQIMLLVAGLIGML HHHHHCCCHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LSRSLSFKRADFDRRRFRVKLRQSPKKSKKKSSAEEPSESASDRSAQVLTEDQPMSTTDH HHHCCCHHHCCHHHHHHHHHHHCCCHHHHHHCCCCCCCHHCCCCCHHHEECCCCCCCCCC PQEKAAKSTKAPKAVTETSVDKHTQTSVQTKTEKTSEKSLELQNNTAVKNATNDAEQAAP CHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHCCC VKVKPKVKSVRQVKHATKATAVTAETSTPKTPSESSDLDTDLTG CEECHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLYLKGLKKSHKISRLIQIAAAFALIFGLVQLWQTSLLQGQLLLKSQTQKMARLLVQQTA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YGAAPALQLQNDEQLQWLASALVEDPKVMSAAIFSDQGMRLSFAQSITKDVVDPDSEEMN CCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHH LLLSKYPPYVEPVIQEGKNLGYVEVRLDTKLFFNEIKEAHNLNMEQQQIMLLVAGLIGML HHHHHCCCHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LSRSLSFKRADFDRRRFRVKLRQSPKKSKKKSSAEEPSESASDRSAQVLTEDQPMSTTDH HHHCCCHHHCCHHHHHHHHHHHCCCHHHHHHCCCCCCCHHCCCCCHHHEECCCCCCCCCC PQEKAAKSTKAPKAVTETSVDKHTQTSVQTKTEKTSEKSLELQNNTAVKNATNDAEQAAP CHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHCCC VKVKPKVKSVRQVKHATKATAVTAETSTPKTPSESSDLDTDLTG CEECHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA