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The map label for this gene is yhjK [C]

Identifier: 126175435

GI number: 126175435

Start: 3792806

End: 3794860

Strand: Direct

Name: yhjK [C]

Synonym: Sbal_3235

Alternate gene names: 126175435

Gene position: 3792806-3794860 (Clockwise)

Preceding gene: 126175423

Following gene: 126175448

Centisome position: 73.97

GC content: 45.74

Gene sequence:

>2055_bases
ATGACAGGCCGTTTTAAGTCACTGACGTGGAAACAAACTAACCTAGTCGTATTTACTGCCCTATTTTTTGCCATTGCCAT
TTTTATTGTTGAAATCGCTTTAGTCGTCGTCTCAACCAAACAACAACTCACGACTACGCAGCAAGAACTCCTTGATTCAG
TTGAACAACCCGCAGCAAATGCCGTCTGGGCATTGGATGACAATTTAGCCCGTCAAACCTTAGAAGGTGCCATTAAGGTT
GAGCATGTCGGCTCAGCAGTGATTGAGCTGGACGATGGTTCCATGTTTGTGTCAGTCAGCAATAATAAAAAGAATAACTC
GCAGACATTTATCAGCTTAAGTAACAAATTATTTGATGATCTTAAAGAAATCTCTCGCCCGCTGTACCGACCTTTTTATT
TCGAAGGCACCCAACAACAGCAACTCATTGGCACATTAACGGTTTTCTACGATACCCAAGAGCTGACAAACACCCTTTTC
TCACAGTTAAGATTTAGTTTTTTCGCCACACTTGCCCGCGCACTCTTACTCACCTTAGTGCTTTCAGTGGTTTTCCATCG
TTTCTTGACTCAACCTATCGCGCGTATCAGTGAGGCCATAGATAAGATTGAACCCGACTCACCGGACGAAAATCTCTTAC
CTATGTCCAATGCGCACAAGGATGATGAACTCGGCCTAGTGACCTCGAAATTCAACCAAATTCTTATCCAATTTAGCCAA
ACCCAATCCAAACTGCGCAAAATGGCGACCCGAGATCCGCTAACGGGTTTACCGAACCGCACATTATTGCTCGAAACCAT
CGCAGTCACTATCCAACGTTCGCGCGTGCACAAACGCAGCTTTGCCTTAATGTTTATCGACTTAGATCGATTTAAGAATA
TTAACGATTCCCTTGGCCACGCATTAGGCGATCAATTCCTCGCCCGTATCGCCCGTATTCTTGAACGCTTCGTTGGCGAT
AAAGGCACAGTCTCTCGCTTAGGTGGCGATGAGTTTGTGATTTTAGCCGACACAGTACACACCCCAGATCAAGCCGCTGA
CTTTGTTGATAAGTTACTTATCCAGCTTAATGTCCCTATCCAATTAAATGAACATGCGATTCATCCTGCGGCCTCAATTG
GCATATCCATTTATCCCGAAGACGGTAACAGCGCAGAAGATTTGATACGTCATGCCGATATTGCCATGTACAGCGCCAAA
GCTGCAGGCTCCAATCAATGGGCCTTCTTTAAACAACAGATGACAGAACGCGCCGCTGTGCGTTTACGCACTGAAGCATC
CTTGCATGATGCGTTAAAAAACAACGAATTTTTGCTGTATTTCCAACCTAAACTCGATCTGCAAACGGGCAAAGTGATTG
CCTGTGAAGCTCTGATCCGCTGGCAAAAAGATGGGCGACTCATCAGTCCGGTTTCTTTTATTCCCGTAGCCGAAGAAACG
GGGATCATCATTCCGATTGGCCGCTGGGTGATAGAACAAAGCTGCAAAGTCTTAAGGGAGTGGCAAAAGAAATATAACTA
TGCCATCCCGATTGCGATTAATGTCGCCTCACAGCAATTCGCCGACGCCAGTTTAGTACCCGATATCAAACAGATGGCAT
TACGTTATCAGATCCAGCCTGAGCTACTGGAAATTGAAATCACTGAAACCTCGCTGATGAACGACATTGAGCTCGCCATC
GCTAAGCTTGAACAACTTAAATCAGCAGGGTTTAGTATTGCCGTCGATGACTTCGGCACCGGATATTCATCACTCTCTTA
CCTGCGCCATTTGCCCATCACCACCATGAAAATCGACCGCTGTTTCGTGTCCGATTTACCAGGGGATAGCGCAATTGCAT
CGACCATTTTGATGTTAGGTAAGCAGCTTAATTTGACCATTGTGGCCGAAGGGATTGAAAACGAGCAACAATTGGATTGG
TTGAAGGAGAATCAGTGCCAAGTCGGCCAAGGTTTCTATTTTAGCCAACCCCTGCCCCAAGCGGAATTTGAAGCCCAGTA
TATAGCAACACAGACAGCAACGATAAGCAGTCTTGATGGCTTACGTGGAGCTTAG

Upstream 100 bases:

>100_bases
CAACTTTTCACTAAAGTGGTTAAATCAACAAAGAGTTGCGGTTTACATTGATACGGAAATTCTCGCAGATGGTGAATAAT
TATCATAAAGGATGCGCCCG

Downstream 100 bases:

>100_bases
GTTAATTTAATCAGCGCTAAGGTTTAGGCGGCGTTAAGGCCAGCGTAATAGGCATAACACTATCGACATGCTCAGGCCTA
AATCCTTCACAGTTCACGCA

Product: diguanylate cyclase/phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 684; Mature: 683

Protein sequence:

>684_residues
MTGRFKSLTWKQTNLVVFTALFFAIAIFIVEIALVVVSTKQQLTTTQQELLDSVEQPAANAVWALDDNLARQTLEGAIKV
EHVGSAVIELDDGSMFVSVSNNKKNNSQTFISLSNKLFDDLKEISRPLYRPFYFEGTQQQQLIGTLTVFYDTQELTNTLF
SQLRFSFFATLARALLLTLVLSVVFHRFLTQPIARISEAIDKIEPDSPDENLLPMSNAHKDDELGLVTSKFNQILIQFSQ
TQSKLRKMATRDPLTGLPNRTLLLETIAVTIQRSRVHKRSFALMFIDLDRFKNINDSLGHALGDQFLARIARILERFVGD
KGTVSRLGGDEFVILADTVHTPDQAADFVDKLLIQLNVPIQLNEHAIHPAASIGISIYPEDGNSAEDLIRHADIAMYSAK
AAGSNQWAFFKQQMTERAAVRLRTEASLHDALKNNEFLLYFQPKLDLQTGKVIACEALIRWQKDGRLISPVSFIPVAEET
GIIIPIGRWVIEQSCKVLREWQKKYNYAIPIAINVASQQFADASLVPDIKQMALRYQIQPELLEIEITETSLMNDIELAI
AKLEQLKSAGFSIAVDDFGTGYSSLSYLRHLPITTMKIDRCFVSDLPGDSAIASTILMLGKQLNLTIVAEGIENEQQLDW
LKENQCQVGQGFYFSQPLPQAEFEAQYIATQTATISSLDGLRGA

Sequences:

>Translated_684_residues
MTGRFKSLTWKQTNLVVFTALFFAIAIFIVEIALVVVSTKQQLTTTQQELLDSVEQPAANAVWALDDNLARQTLEGAIKV
EHVGSAVIELDDGSMFVSVSNNKKNNSQTFISLSNKLFDDLKEISRPLYRPFYFEGTQQQQLIGTLTVFYDTQELTNTLF
SQLRFSFFATLARALLLTLVLSVVFHRFLTQPIARISEAIDKIEPDSPDENLLPMSNAHKDDELGLVTSKFNQILIQFSQ
TQSKLRKMATRDPLTGLPNRTLLLETIAVTIQRSRVHKRSFALMFIDLDRFKNINDSLGHALGDQFLARIARILERFVGD
KGTVSRLGGDEFVILADTVHTPDQAADFVDKLLIQLNVPIQLNEHAIHPAASIGISIYPEDGNSAEDLIRHADIAMYSAK
AAGSNQWAFFKQQMTERAAVRLRTEASLHDALKNNEFLLYFQPKLDLQTGKVIACEALIRWQKDGRLISPVSFIPVAEET
GIIIPIGRWVIEQSCKVLREWQKKYNYAIPIAINVASQQFADASLVPDIKQMALRYQIQPELLEIEITETSLMNDIELAI
AKLEQLKSAGFSIAVDDFGTGYSSLSYLRHLPITTMKIDRCFVSDLPGDSAIASTILMLGKQLNLTIVAEGIENEQQLDW
LKENQCQVGQGFYFSQPLPQAEFEAQYIATQTATISSLDGLRGA
>Mature_683_residues
TGRFKSLTWKQTNLVVFTALFFAIAIFIVEIALVVVSTKQQLTTTQQELLDSVEQPAANAVWALDDNLARQTLEGAIKVE
HVGSAVIELDDGSMFVSVSNNKKNNSQTFISLSNKLFDDLKEISRPLYRPFYFEGTQQQQLIGTLTVFYDTQELTNTLFS
QLRFSFFATLARALLLTLVLSVVFHRFLTQPIARISEAIDKIEPDSPDENLLPMSNAHKDDELGLVTSKFNQILIQFSQT
QSKLRKMATRDPLTGLPNRTLLLETIAVTIQRSRVHKRSFALMFIDLDRFKNINDSLGHALGDQFLARIARILERFVGDK
GTVSRLGGDEFVILADTVHTPDQAADFVDKLLIQLNVPIQLNEHAIHPAASIGISIYPEDGNSAEDLIRHADIAMYSAKA
AGSNQWAFFKQQMTERAAVRLRTEASLHDALKNNEFLLYFQPKLDLQTGKVIACEALIRWQKDGRLISPVSFIPVAEETG
IIIPIGRWVIEQSCKVLREWQKKYNYAIPIAINVASQQFADASLVPDIKQMALRYQIQPELLEIEITETSLMNDIELAIA
KLEQLKSAGFSIAVDDFGTGYSSLSYLRHLPITTMKIDRCFVSDLPGDSAIASTILMLGKQLNLTIVAEGIENEQQLDWL
KENQCQVGQGFYFSQPLPQAEFEAQYIATQTATISSLDGLRGA

Specific function: Unknown

COG id: COG5001

COG function: function code T; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MHYT domain [H]

Homologues:

Organism=Escherichia coli, GI226510982, Length=656, Percent_Identity=30.030487804878, Blast_Score=298, Evalue=9e-82,
Organism=Escherichia coli, GI1787541, Length=432, Percent_Identity=34.7222222222222, Blast_Score=290, Evalue=3e-79,
Organism=Escherichia coli, GI87081921, Length=433, Percent_Identity=33.7182448036951, Blast_Score=228, Evalue=1e-60,
Organism=Escherichia coli, GI87081743, Length=237, Percent_Identity=35.4430379746835, Blast_Score=156, Evalue=5e-39,
Organism=Escherichia coli, GI1790496, Length=248, Percent_Identity=32.6612903225806, Blast_Score=152, Evalue=6e-38,
Organism=Escherichia coli, GI87081845, Length=238, Percent_Identity=34.8739495798319, Blast_Score=148, Evalue=9e-37,
Organism=Escherichia coli, GI87081980, Length=257, Percent_Identity=31.5175097276265, Blast_Score=138, Evalue=1e-33,
Organism=Escherichia coli, GI1788502, Length=249, Percent_Identity=32.1285140562249, Blast_Score=135, Evalue=1e-32,
Organism=Escherichia coli, GI1786507, Length=272, Percent_Identity=29.4117647058824, Blast_Score=125, Evalue=7e-30,
Organism=Escherichia coli, GI1788849, Length=264, Percent_Identity=31.8181818181818, Blast_Score=115, Evalue=7e-27,
Organism=Escherichia coli, GI1787055, Length=237, Percent_Identity=28.6919831223629, Blast_Score=108, Evalue=1e-24,
Organism=Escherichia coli, GI1788381, Length=354, Percent_Identity=24.8587570621469, Blast_Score=100, Evalue=5e-22,
Organism=Escherichia coli, GI87082096, Length=247, Percent_Identity=29.1497975708502, Blast_Score=97, Evalue=4e-21,
Organism=Escherichia coli, GI1788956, Length=232, Percent_Identity=31.4655172413793, Blast_Score=96, Evalue=7e-21,
Organism=Escherichia coli, GI1787262, Length=189, Percent_Identity=31.2169312169312, Blast_Score=86, Evalue=7e-18,
Organism=Escherichia coli, GI1786584, Length=178, Percent_Identity=29.7752808988764, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI87081977, Length=165, Percent_Identity=31.5151515151515, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787802, Length=200, Percent_Identity=29.5, Blast_Score=83, Evalue=6e-17,
Organism=Escherichia coli, GI1787816, Length=189, Percent_Identity=31.7460317460317, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI87082007, Length=168, Percent_Identity=32.7380952380952, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI87081881, Length=166, Percent_Identity=31.3253012048193, Blast_Score=76, Evalue=7e-15,
Organism=Escherichia coli, GI1789650, Length=442, Percent_Identity=21.7194570135747, Blast_Score=70, Evalue=6e-13,
Organism=Escherichia coli, GI1787056, Length=125, Percent_Identity=33.6, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI145693134, Length=170, Percent_Identity=30.5882352941176, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI87081974, Length=174, Percent_Identity=31.0344827586207, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR005330 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT [H]

EC number: NA

Molecular weight: Translated: 76586; Mature: 76455

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS50883 EAL ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGRFKSLTWKQTNLVVFTALFFAIAIFIVEIALVVVSTKQQLTTTQQELLDSVEQPAAN
CCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC
AVWALDDNLARQTLEGAIKVEHVGSAVIELDDGSMFVSVSNNKKNNSQTFISLSNKLFDD
EEEEECHHHHHHHHHCCEEEEECCCEEEEECCCEEEEEECCCCCCCCCCEEEHHHHHHHH
LKEISRPLYRPFYFEGTQQQQLIGTLTVFYDTQELTNTLFSQLRFSFFATLARALLLTLV
HHHHHHHHCCCEEECCCCHHHHHEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSVVFHRFLTQPIARISEAIDKIEPDSPDENLLPMSNAHKDDELGLVTSKFNQILIQFSQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
TQSKLRKMATRDPLTGLPNRTLLLETIAVTIQRSRVHKRSFALMFIDLDRFKNINDSLGH
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEHHHHCCCCHHHHH
ALGDQFLARIARILERFVGDKGTVSRLGGDEFVILADTVHTPDQAADFVDKLLIQLNVPI
HHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCE
QLNEHAIHPAASIGISIYPEDGNSAEDLIRHADIAMYSAKAAGSNQWAFFKQQMTERAAV
EECCCCCCCHHHCCEEEEECCCCCHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHH
RLRTEASLHDALKNNEFLLYFQPKLDLQTGKVIACEALIRWQKDGRLISPVSFIPVAEET
HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEHHHHHHCCCCCEECCEEEEECCCCC
GIIIPIGRWVIEQSCKVLREWQKKYNYAIPIAINVASQQFADASLVPDIKQMALRYQIQP
CEEEECHHHHHHHHHHHHHHHHHHCCEEEEEEEEECHHHHCCCCCCCHHHHHHHHHCCCC
ELLEIEITETSLMNDIELAIAKLEQLKSAGFSIAVDDFGTGYSSLSYLRHLPITTMKIDR
CEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCEEEEHH
CFVSDLPGDSAIASTILMLGKQLNLTIVAEGIENEQQLDWLKENQCQVGQGFYFSQPLPQ
HHHCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCEECCCCCCC
AEFEAQYIATQTATISSLDGLRGA
CHHCHHHHEECCHHHHHCCCCCCC
>Mature Secondary Structure 
TGRFKSLTWKQTNLVVFTALFFAIAIFIVEIALVVVSTKQQLTTTQQELLDSVEQPAAN
CCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC
AVWALDDNLARQTLEGAIKVEHVGSAVIELDDGSMFVSVSNNKKNNSQTFISLSNKLFDD
EEEEECHHHHHHHHHCCEEEEECCCEEEEECCCEEEEEECCCCCCCCCCEEEHHHHHHHH
LKEISRPLYRPFYFEGTQQQQLIGTLTVFYDTQELTNTLFSQLRFSFFATLARALLLTLV
HHHHHHHHCCCEEECCCCHHHHHEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSVVFHRFLTQPIARISEAIDKIEPDSPDENLLPMSNAHKDDELGLVTSKFNQILIQFSQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
TQSKLRKMATRDPLTGLPNRTLLLETIAVTIQRSRVHKRSFALMFIDLDRFKNINDSLGH
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEHHHHCCCCHHHHH
ALGDQFLARIARILERFVGDKGTVSRLGGDEFVILADTVHTPDQAADFVDKLLIQLNVPI
HHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCE
QLNEHAIHPAASIGISIYPEDGNSAEDLIRHADIAMYSAKAAGSNQWAFFKQQMTERAAV
EECCCCCCCHHHCCEEEEECCCCCHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHH
RLRTEASLHDALKNNEFLLYFQPKLDLQTGKVIACEALIRWQKDGRLISPVSFIPVAEET
HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEHHHHHHCCCCCEECCEEEEECCCCC
GIIIPIGRWVIEQSCKVLREWQKKYNYAIPIAINVASQQFADASLVPDIKQMALRYQIQP
CEEEECHHHHHHHHHHHHHHHHHHCCEEEEEEEEECHHHHCCCCCCCHHHHHHHHHCCCC
ELLEIEITETSLMNDIELAIAKLEQLKSAGFSIAVDDFGTGYSSLSYLRHLPITTMKIDR
CEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCEEEEHH
CFVSDLPGDSAIASTILMLGKQLNLTIVAEGIENEQQLDWLKENQCQVGQGFYFSQPLPQ
HHHCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCEECCCCCCC
AEFEAQYIATQTATISSLDGLRGA
CHHCHHHHEECCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]