| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175420
Identifier: 126175420
GI number: 126175420
Start: 3773416
End: 3775830
Strand: Direct
Name: 126175420
Synonym: Sbal_3220
Alternate gene names: NA
Gene position: 3773416-3775830 (Clockwise)
Preceding gene: 126175418
Following gene: 126175423
Centisome position: 73.59
GC content: 43.06
Gene sequence:
>2415_bases TTGGGTATTAATAAGCATTTAAAAGAACCCTACATGAGTTTAGATAACCACAGTGCACTCATCGAACAGCTCAAGCCATT AATCATGGAACCTAACTTCCAAGAGATTTTCCAGCAGCTGACGATAGATGAAACCAATTCGACCCGTTTTCTATTGAAAA TGGAGCTCAATCGTTTGGCGTCACCTTGCATGCGGATTATCGATCTCAGGGATAAATCAGAGCTTGCTTGTACTGAAGTC ATATTAGGCCAACTGCGACATTTTTTAGATGAACCCGCCAAAAACAGTTTACATGAGGCCATGTCACTGTATCGCAACCA ATATACCTTAGGCGTCTATGAACATGTGCTCAAGGCTCATCAACTACGTAAATTAAAGTTACGCCAAGGTACTCTGCAGA CAGGCGCTATCGAGCAAGAACCTTTTATGGTGCCAGGCGTGGTATTAGGCAGCTATTTCAACCGCGCTGAAGAGCGGATG AATTACAGTATTCGCATTGCGGCATCACAACCTGGCCGTGGCGAAGAGCCAGGGATCACTGCAGATTTATCTATTGGCGG CGCCCGCATTCGTCTTGCAGCCAATCAACCCTTCGATCTCGACCAACCACTTAAAGTAAAATTACTGGAACTCAGTGATG AGTTTTATTATCCCGATCTCCAGCTCGGTGTGGATTATCAAATTGTTGATAGTCAAATCAATGGCGAATATATTTGGCTA AGACTTAAACGCCTTGGTGGCAGCGAAGCCTTAAGTGAAATGCTCGGTAATTTAATCCGCAGCTATAAATTGCGTTACAA GGTAGATGTGAATGATGTCATAGTCACAGCAACAGGGCTTGGATTTGAACGCCATTATTTACCCCATTTGCCTCACTTAC CTTTGTATTTCAATACTCAAACCCAAGGTTTGAGTCACATGCTACTCAGCCGTGACAACCAGCAGATAGTGCATTATTTT CAAGATGAAAATGATGTCAGTCAGCTGCCTGCCATGTTGACGCCAAGCCGTATATCGGCACTGCTTAATAATCCTGACAA CCCAGACTATGGGCTATTTTTTAGTTTTACCTATAACGCCCAAGGCTGCTTATATTTTTACTCTGCCACCTTAGCCGAGC TTAAAGCTAAGGGCATGATGTCTTTATTCTTAGGCTTTGCGTCGACCAAACCCAGCTGGCGAGTTTTTAAAGTCACCCAA GATAAAATCTATCATGATAAGGGCTATCGCCGTGAGACTCTGCCTGGTGATGAGGCTAAGTTCAGCCCACTGGTCGAACA ACAATTATCACTATTTAGTCACATACTCCAGCTCATCGATATCAGCAATGAAGATGCTAGAGAAAACTACCAAGCATGGC AGGACGACAGTAATGCCAATGCTCTTAAAACATTTGGTCAACAGCGATTAAGTAATAATCAAATTAAGTTAGTTTCCATG CAGTTTAGCGAGCGACGCCAAGAGGCTCGTTTCGCCTTTAAAACCTTAGTGCACATCACACAGGGAAATATCAAAGCTAC AGGTATCTCCTTAGATATTTCTAGCCGCGGCATGCAAGTCACTTTAGATAGCTCTGCAGACTTTTCATCAAATAAACCAT TAATGCTTAGTTTTCCTAAACAACAAACCATCGCGGGCAAAACACAGCTAGATAACCTCCCCTATCGCTTAGTAAGAGTC CGTAAGAATGGCGTGACGCTGCATTTAACCGCAGTAATGGGTCATTCTCCCCATGTGGGAGTGGAGTTTTTAAATAAACT CATCGCTCATAATAAGGAAAAGTTAGAACAACTAACCGAAAACAATAGTGAGGCTAATGAACTAGCCGATGGTTTAAAAA ATTTATTATTACGTGATTTGCATTCTGTGCCCTATTTTGTTGAAAAAACAACAAAAGCAGCTCAAGTCGCGTGTTTAGGC GTCGGCACGCGGCAGGATGAGGTCAGCGATATTTTTGCTGCGGGAACCTCAGATACCCTGCAATATAACTTAGCACCGCT ACTAAAAGACGGATTCTTTAAACGGGATATTCTCGAACCTATCCGTCAGATGAAACCACAGCAAGACATGGATTTCATTG AAGTATTTGTCCAAGTAACTCGACAATCGCGCGGAAAAATTCATCTGAAGTGTATGCGAACGACAGAAATCGGTAACGCT CAAGCGCAGTTAGCCTTTATCAATCAAAGTAACATTACTGGCCGTTTTATTGCCCTACGCATTTACCGTGGTGCCACAGA GAAGCCAGACATGAGTTATCTGCGCCGCGAGTTGGAATACATTCATATTCATGCAAACCACAAAGCCAAACAGTTAGAAG AACAGTTATGGCGAGTGATAGGTGTCGGTGAACTCTTGGATATCACCCAAGAGGTTGAATTAAGATACCCTGCGCTCCAC AAAAAACAGTCTTAA
Upstream 100 bases:
>100_bases TTCCGTGTTGCATCAATTCAGAAGGTGGCCGACATTCTGTCATTGATGCGCCTTGAATTGAACCACCCTATGCGCTCTGA AACTCGTACCTTCAGGTAGC
Downstream 100 bases:
>100_bases CCATTTAACACCGCCAAATCAAAACTTAAATACCAATCACTAATTTTGGGGAAATGATCGCTGGTGGCATCTAAATGCGT CAGCATATCGGCATGACCAT
Product: type IV pilus assembly PilZ
Products: NA
Alternate protein names: Type IV Pilus Assembly Protein PilZ; Type IV Pilus Assembly TapZ
Number of amino acids: Translated: 804; Mature: 803
Protein sequence:
>804_residues MGINKHLKEPYMSLDNHSALIEQLKPLIMEPNFQEIFQQLTIDETNSTRFLLKMELNRLASPCMRIIDLRDKSELACTEV ILGQLRHFLDEPAKNSLHEAMSLYRNQYTLGVYEHVLKAHQLRKLKLRQGTLQTGAIEQEPFMVPGVVLGSYFNRAEERM NYSIRIAASQPGRGEEPGITADLSIGGARIRLAANQPFDLDQPLKVKLLELSDEFYYPDLQLGVDYQIVDSQINGEYIWL RLKRLGGSEALSEMLGNLIRSYKLRYKVDVNDVIVTATGLGFERHYLPHLPHLPLYFNTQTQGLSHMLLSRDNQQIVHYF QDENDVSQLPAMLTPSRISALLNNPDNPDYGLFFSFTYNAQGCLYFYSATLAELKAKGMMSLFLGFASTKPSWRVFKVTQ DKIYHDKGYRRETLPGDEAKFSPLVEQQLSLFSHILQLIDISNEDARENYQAWQDDSNANALKTFGQQRLSNNQIKLVSM QFSERRQEARFAFKTLVHITQGNIKATGISLDISSRGMQVTLDSSADFSSNKPLMLSFPKQQTIAGKTQLDNLPYRLVRV RKNGVTLHLTAVMGHSPHVGVEFLNKLIAHNKEKLEQLTENNSEANELADGLKNLLLRDLHSVPYFVEKTTKAAQVACLG VGTRQDEVSDIFAAGTSDTLQYNLAPLLKDGFFKRDILEPIRQMKPQQDMDFIEVFVQVTRQSRGKIHLKCMRTTEIGNA QAQLAFINQSNITGRFIALRIYRGATEKPDMSYLRRELEYIHIHANHKAKQLEEQLWRVIGVGELLDITQEVELRYPALH KKQS
Sequences:
>Translated_804_residues MGINKHLKEPYMSLDNHSALIEQLKPLIMEPNFQEIFQQLTIDETNSTRFLLKMELNRLASPCMRIIDLRDKSELACTEV ILGQLRHFLDEPAKNSLHEAMSLYRNQYTLGVYEHVLKAHQLRKLKLRQGTLQTGAIEQEPFMVPGVVLGSYFNRAEERM NYSIRIAASQPGRGEEPGITADLSIGGARIRLAANQPFDLDQPLKVKLLELSDEFYYPDLQLGVDYQIVDSQINGEYIWL RLKRLGGSEALSEMLGNLIRSYKLRYKVDVNDVIVTATGLGFERHYLPHLPHLPLYFNTQTQGLSHMLLSRDNQQIVHYF QDENDVSQLPAMLTPSRISALLNNPDNPDYGLFFSFTYNAQGCLYFYSATLAELKAKGMMSLFLGFASTKPSWRVFKVTQ DKIYHDKGYRRETLPGDEAKFSPLVEQQLSLFSHILQLIDISNEDARENYQAWQDDSNANALKTFGQQRLSNNQIKLVSM QFSERRQEARFAFKTLVHITQGNIKATGISLDISSRGMQVTLDSSADFSSNKPLMLSFPKQQTIAGKTQLDNLPYRLVRV RKNGVTLHLTAVMGHSPHVGVEFLNKLIAHNKEKLEQLTENNSEANELADGLKNLLLRDLHSVPYFVEKTTKAAQVACLG VGTRQDEVSDIFAAGTSDTLQYNLAPLLKDGFFKRDILEPIRQMKPQQDMDFIEVFVQVTRQSRGKIHLKCMRTTEIGNA QAQLAFINQSNITGRFIALRIYRGATEKPDMSYLRRELEYIHIHANHKAKQLEEQLWRVIGVGELLDITQEVELRYPALH KKQS >Mature_803_residues GINKHLKEPYMSLDNHSALIEQLKPLIMEPNFQEIFQQLTIDETNSTRFLLKMELNRLASPCMRIIDLRDKSELACTEVI LGQLRHFLDEPAKNSLHEAMSLYRNQYTLGVYEHVLKAHQLRKLKLRQGTLQTGAIEQEPFMVPGVVLGSYFNRAEERMN YSIRIAASQPGRGEEPGITADLSIGGARIRLAANQPFDLDQPLKVKLLELSDEFYYPDLQLGVDYQIVDSQINGEYIWLR LKRLGGSEALSEMLGNLIRSYKLRYKVDVNDVIVTATGLGFERHYLPHLPHLPLYFNTQTQGLSHMLLSRDNQQIVHYFQ DENDVSQLPAMLTPSRISALLNNPDNPDYGLFFSFTYNAQGCLYFYSATLAELKAKGMMSLFLGFASTKPSWRVFKVTQD KIYHDKGYRRETLPGDEAKFSPLVEQQLSLFSHILQLIDISNEDARENYQAWQDDSNANALKTFGQQRLSNNQIKLVSMQ FSERRQEARFAFKTLVHITQGNIKATGISLDISSRGMQVTLDSSADFSSNKPLMLSFPKQQTIAGKTQLDNLPYRLVRVR KNGVTLHLTAVMGHSPHVGVEFLNKLIAHNKEKLEQLTENNSEANELADGLKNLLLRDLHSVPYFVEKTTKAAQVACLGV GTRQDEVSDIFAAGTSDTLQYNLAPLLKDGFFKRDILEPIRQMKPQQDMDFIEVFVQVTRQSRGKIHLKCMRTTEIGNAQ AQLAFINQSNITGRFIALRIYRGATEKPDMSYLRRELEYIHIHANHKAKQLEEQLWRVIGVGELLDITQEVELRYPALHK KQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91772; Mature: 91641
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGINKHLKEPYMSLDNHSALIEQLKPLIMEPNFQEIFQQLTIDETNSTRFLLKMELNRLA CCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEEEHHHHHH SPCMRIIDLRDKSELACTEVILGQLRHFLDEPAKNSLHEAMSLYRNQYTLGVYEHVLKAH HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH QLRKLKLRQGTLQTGAIEQEPFMVPGVVLGSYFNRAEERMNYSIRIAASQPGRGEEPGIT HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEE ADLSIGGARIRLAANQPFDLDQPLKVKLLELSDEFYYPDLQLGVDYQIVDSQINGEYIWL EEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCEEECCCEEEECCCCCCCEEEE RLKRLGGSEALSEMLGNLIRSYKLRYKVDVNDVIVTATGLGFERHYLPHLPHLPLYFNTQ EEECCCCHHHHHHHHHHHHHHCEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCEEECCC TQGLSHMLLSRDNQQIVHYFQDENDVSQLPAMLTPSRISALLNNPDNPDYGLFFSFTYNA CCCHHHHHHCCCCHHHHHEECCCCCHHHCCCCCCHHHHHHHHCCCCCCCCEEEEEEEECC QGCLYFYSATLAELKAKGMMSLFLGFASTKPSWRVFKVTQDKIYHDKGYRRETLPGDEAK CCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHCCCCCCCCCCCCCCCC FSPLVEQQLSLFSHILQLIDISNEDARENYQAWQDDSNANALKTFGQQRLSNNQIKLVSM CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEE QFSERRQEARFAFKTLVHITQGNIKATGISLDISSRGMQVTLDSSADFSSNKPLMLSFPK HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCCEEEECCC QQTIAGKTQLDNLPYRLVRVRKNGVTLHLTAVMGHSPHVGVEFLNKLIAHNKEKLEQLTE CHHHCCCHHCCCCCEEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHC NNSEANELADGLKNLLLRDLHSVPYFVEKTTKAAQVACLGVGTRQDEVSDIFAAGTSDTL CCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHEEEEEECCCCHHHHHHHHHCCCCCCE QYNLAPLLKDGFFKRDILEPIRQMKPQQDMDFIEVFVQVTRQSRGKIHLKCMRTTEIGNA EECCHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCC QAQLAFINQSNITGRFIALRIYRGATEKPDMSYLRRELEYIHIHANHKAKQLEEQLWRVI EEEEEEEECCCCCEEEEEEEEECCCCCCCCHHHHHHHCEEEEEECCCHHHHHHHHHHHHH GVGELLDITQEVELRYPALHKKQS CCHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure GINKHLKEPYMSLDNHSALIEQLKPLIMEPNFQEIFQQLTIDETNSTRFLLKMELNRLA CCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEEEHHHHHH SPCMRIIDLRDKSELACTEVILGQLRHFLDEPAKNSLHEAMSLYRNQYTLGVYEHVLKAH HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH QLRKLKLRQGTLQTGAIEQEPFMVPGVVLGSYFNRAEERMNYSIRIAASQPGRGEEPGIT HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEE ADLSIGGARIRLAANQPFDLDQPLKVKLLELSDEFYYPDLQLGVDYQIVDSQINGEYIWL EEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCEEECCCEEEECCCCCCCEEEE RLKRLGGSEALSEMLGNLIRSYKLRYKVDVNDVIVTATGLGFERHYLPHLPHLPLYFNTQ EEECCCCHHHHHHHHHHHHHHCEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCEEECCC TQGLSHMLLSRDNQQIVHYFQDENDVSQLPAMLTPSRISALLNNPDNPDYGLFFSFTYNA CCCHHHHHHCCCCHHHHHEECCCCCHHHCCCCCCHHHHHHHHCCCCCCCCEEEEEEEECC QGCLYFYSATLAELKAKGMMSLFLGFASTKPSWRVFKVTQDKIYHDKGYRRETLPGDEAK CCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHCCCCCCCCCCCCCCCC FSPLVEQQLSLFSHILQLIDISNEDARENYQAWQDDSNANALKTFGQQRLSNNQIKLVSM CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEE QFSERRQEARFAFKTLVHITQGNIKATGISLDISSRGMQVTLDSSADFSSNKPLMLSFPK HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCCEEEECCC QQTIAGKTQLDNLPYRLVRVRKNGVTLHLTAVMGHSPHVGVEFLNKLIAHNKEKLEQLTE CHHHCCCHHCCCCCEEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHC NNSEANELADGLKNLLLRDLHSVPYFVEKTTKAAQVACLGVGTRQDEVSDIFAAGTSDTL CCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHEEEEEECCCCHHHHHHHHHCCCCCCE QYNLAPLLKDGFFKRDILEPIRQMKPQQDMDFIEVFVQVTRQSRGKIHLKCMRTTEIGNA EECCHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCC QAQLAFINQSNITGRFIALRIYRGATEKPDMSYLRRELEYIHIHANHKAKQLEEQLWRVI EEEEEEEECCCCCEEEEEEEEECCCCCCCCHHHHHHHCEEEEEECCCHHHHHHHHHHHHH GVGELLDITQEVELRYPALHKKQS CCHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA