| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175275
Identifier: 126175275
GI number: 126175275
Start: 3595718
End: 3596218
Strand: Direct
Name: 126175275
Synonym: Sbal_3074
Alternate gene names: NA
Gene position: 3595718-3596218 (Clockwise)
Preceding gene: 126175272
Following gene: 126175277
Centisome position: 70.13
GC content: 46.71
Gene sequence:
>501_bases ATGAGCCAGACTGACTCTTCTAGCACTGCAGAACAAAAACCCAATAAAGTGCTCGCGCTCTACCATAAGACTCGCCGTTA TCCCTTCGGCCAAAAACTGTTTTCGATCATGGTTTCACGAATGGCGCCCTATTTCGGCACCATCAAACCACTGATCACTG AATTACGCCTTAATCATTGCGCCTGTTTAATTAAAAAACGCCATGCTGTTCATAATCATATAAAAACTGTGCATGTGATT GCGATTTGTAACGGCCTAGAAATGGCGATGGGCGTGATGGCCGAAGCCTCAATTCCAAAGCATTTACGTTGGATCCCTAA GGGCATGAGTTTGGATTATACCGCTAAAGCCGGCAGCGATATTTTGTGTATCGCCGAAGTGACGCCAGAGCAATGGACTC CGGGCGATATGCTCGTCCCCGTTACCGCCTACGACGCCCAAGGTGTGGTTGTGGTGAAAGGACATATCAAGTTGTGGATT TCAGAAAAACCACAGAAATAA
Upstream 100 bases:
>100_bases GTTATCCTAATGTTACACTCATCCGACCAGAGCAGTCCAAGCTCAACTTGGAACAGGCTCAAGATAACAATACCCTTTTG CATCATTATTAAGGATGACC
Downstream 100 bases:
>100_bases GCGTTTTACACGAGCGCTGTGCTTAATGTCTGCATCTAAAAAGGGAGCTAAGATCCCTTTTACTTTTTTAGCCTTCAGCC GTATTTTGTTAAAAAACTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Thioesterase; Phenylacetic Acid Degradation-Like Protein; Thioesterase Superfamily Protein
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MSQTDSSSTAEQKPNKVLALYHKTRRYPFGQKLFSIMVSRMAPYFGTIKPLITELRLNHCACLIKKRHAVHNHIKTVHVI AICNGLEMAMGVMAEASIPKHLRWIPKGMSLDYTAKAGSDILCIAEVTPEQWTPGDMLVPVTAYDAQGVVVVKGHIKLWI SEKPQK
Sequences:
>Translated_166_residues MSQTDSSSTAEQKPNKVLALYHKTRRYPFGQKLFSIMVSRMAPYFGTIKPLITELRLNHCACLIKKRHAVHNHIKTVHVI AICNGLEMAMGVMAEASIPKHLRWIPKGMSLDYTAKAGSDILCIAEVTPEQWTPGDMLVPVTAYDAQGVVVVKGHIKLWI SEKPQK >Mature_165_residues SQTDSSSTAEQKPNKVLALYHKTRRYPFGQKLFSIMVSRMAPYFGTIKPLITELRLNHCACLIKKRHAVHNHIKTVHVIA ICNGLEMAMGVMAEASIPKHLRWIPKGMSLDYTAKAGSDILCIAEVTPEQWTPGDMLVPVTAYDAQGVVVVKGHIKLWIS EKPQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18550; Mature: 18419
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQTDSSSTAEQKPNKVLALYHKTRRYPFGQKLFSIMVSRMAPYFGTIKPLITELRLNHC CCCCCCCCCHHHCCCCEEEEEHHHHCCCCHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHH ACLIKKRHAVHNHIKTVHVIAICNGLEMAMGVMAEASIPKHLRWIPKGMSLDYTAKAGSD HHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHCCCCHHHHHCCCCCCEEEECCCCCC ILCIAEVTPEQWTPGDMLVPVTAYDAQGVVVVKGHIKLWISEKPQK EEEEEECCCCCCCCCCEEEEEEEECCCCEEEEEEEEEEEEECCCCC >Mature Secondary Structure SQTDSSSTAEQKPNKVLALYHKTRRYPFGQKLFSIMVSRMAPYFGTIKPLITELRLNHC CCCCCCCCHHHCCCCEEEEEHHHHCCCCHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHH ACLIKKRHAVHNHIKTVHVIAICNGLEMAMGVMAEASIPKHLRWIPKGMSLDYTAKAGSD HHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHCCCCHHHHHCCCCCCEEEECCCCCC ILCIAEVTPEQWTPGDMLVPVTAYDAQGVVVVKGHIKLWISEKPQK EEEEEECCCCCCCCCCEEEEEEEECCCCEEEEEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA