| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is hisC [H]
Identifier: 126174640
GI number: 126174640
Start: 2828496
End: 2829695
Strand: Direct
Name: hisC [H]
Synonym: Sbal_2427
Alternate gene names: 126174640
Gene position: 2828496-2829695 (Clockwise)
Preceding gene: 126174639
Following gene: 126174641
Centisome position: 55.16
GC content: 51.67
Gene sequence:
>1200_bases ATGAGCCAAGTGAGCAGCATGGAAAAGACAGCAGAACCCGCAGCATTAGCATCGACGTTAGCACCATCAACGTTAACGCA ATCGGCGTCGCTAAATTTAGCCGAGCGCCTAGCGCGCCCTGAATTACTGGATTTAACGCCCTACCAAAGTGCCCGCAGAC TGGGCGGTCGTGGTGATATTTGGATCAATGCCAACGAATCGCCCTTTAATAATGTCGATACGGCAGCGCTCGATTTATCG AAATTGAATCGTTACCCAGAATGCCAACCGCCGCAGCTTATCAAGGCCTACAGCGAGTACAGCGGCGTAAGCGCCAGCAA GATAGTCGCCAGCCGCGGCGCCGATGAAGCGATTGAACTGTTAATTCGCGCTTTTTGTATACCTGGCGTCGACAGCATTG CTTGCTTTGGCCCGACGTACGGCATGTATGCCATCAGCGCGAACACCTTTAATGTGGGCGTTAAAGCGTTAAATCTCAGC GCGGAATATGGCTTGCCGACCAGCTATGCTGAAGACGTTTGCGGCGCAAAACTGGTGTTTATCTGCAATCCCAATAATCC GACGGGGACTATGATCGACAAAGCCATTATCGAGCAAGCGATCAAAGCCCTGCCCGATGCGCTTGTGGTGATCGATGAGG CCTATATTGAGTTTTGCCCTGAATACAGTGTGGCGGATTTACTGAAAAGCTATCCGAATCTAGTGGTACTGCGCACCCTA TCAAAAGCCTTTGCACTCGCCGGAGCACGCTGCGGTTTTATGCTGGCAAATGAGGCCGTAGTCGACATCATTATGCGCGT AATTGCGCCCTATCCTGTGCCGCTACCCGTGAGTGAAGTCGCCACCCAAGCGCTATCAAGCGCTGGCGTTGCGCGGATGA AAGTGCAAGTTGCACAATTAAATGAGCAAGGCGCCAGACTCACCGCAGCGATCAGCGCATATTGTTCAAAATCGAATAGC TCAGATTCTCGCGCCCGCGTGCTTAAGCCTAACGGCAATTATGTGCTGGCTGAATTTGATGATGTCGCCAAGGTCGCGGC GTTACTGCAAGGCAGCGGTGTTGTCGCCCGCGCCTACAAAGACCCAAGGCTTGCTAAGGCCATCCGTTTTAGCTTTAGTT CAAAGGCGGATACCGATGTGTTAGTGAATTTATTTGAATCGCAGCGCACTGAGCAGTCACCAGAAACGAATAATAAGTAA
Upstream 100 bases:
>100_bases TGCTCGATGCACACAAAAATGCCGTTGCCATTCGCCTAGCTAGCCTAGAGAAATGATCCGCTTAATCTTAAGTAATTGAA AATAGAGCTGAGTGAAGAAA
Downstream 100 bases:
>100_bases CTGAACATAAAAACTAATAAAACCAATAAAAAGCGAATGCCGCGTTGAAGGTAAAATCAGCTTAAGCATTAGCTAAACGA ATTGAATTTGAAGGTAGAGC
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase [H]
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MSQVSSMEKTAEPAALASTLAPSTLTQSASLNLAERLARPELLDLTPYQSARRLGGRGDIWINANESPFNNVDTAALDLS KLNRYPECQPPQLIKAYSEYSGVSASKIVASRGADEAIELLIRAFCIPGVDSIACFGPTYGMYAISANTFNVGVKALNLS AEYGLPTSYAEDVCGAKLVFICNPNNPTGTMIDKAIIEQAIKALPDALVVIDEAYIEFCPEYSVADLLKSYPNLVVLRTL SKAFALAGARCGFMLANEAVVDIIMRVIAPYPVPLPVSEVATQALSSAGVARMKVQVAQLNEQGARLTAAISAYCSKSNS SDSRARVLKPNGNYVLAEFDDVAKVAALLQGSGVVARAYKDPRLAKAIRFSFSSKADTDVLVNLFESQRTEQSPETNNK
Sequences:
>Translated_399_residues MSQVSSMEKTAEPAALASTLAPSTLTQSASLNLAERLARPELLDLTPYQSARRLGGRGDIWINANESPFNNVDTAALDLS KLNRYPECQPPQLIKAYSEYSGVSASKIVASRGADEAIELLIRAFCIPGVDSIACFGPTYGMYAISANTFNVGVKALNLS AEYGLPTSYAEDVCGAKLVFICNPNNPTGTMIDKAIIEQAIKALPDALVVIDEAYIEFCPEYSVADLLKSYPNLVVLRTL SKAFALAGARCGFMLANEAVVDIIMRVIAPYPVPLPVSEVATQALSSAGVARMKVQVAQLNEQGARLTAAISAYCSKSNS SDSRARVLKPNGNYVLAEFDDVAKVAALLQGSGVVARAYKDPRLAKAIRFSFSSKADTDVLVNLFESQRTEQSPETNNK >Mature_398_residues SQVSSMEKTAEPAALASTLAPSTLTQSASLNLAERLARPELLDLTPYQSARRLGGRGDIWINANESPFNNVDTAALDLSK LNRYPECQPPQLIKAYSEYSGVSASKIVASRGADEAIELLIRAFCIPGVDSIACFGPTYGMYAISANTFNVGVKALNLSA EYGLPTSYAEDVCGAKLVFICNPNNPTGTMIDKAIIEQAIKALPDALVVIDEAYIEFCPEYSVADLLKSYPNLVVLRTLS KAFALAGARCGFMLANEAVVDIIMRVIAPYPVPLPVSEVATQALSSAGVARMKVQVAQLNEQGARLTAAISAYCSKSNSS DSRARVLKPNGNYVLAEFDDVAKVAALLQGSGVVARAYKDPRLAKAIRFSFSSKADTDVLVNLFESQRTEQSPETNNK
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=356, Percent_Identity=43.8202247191011, Blast_Score=293, Evalue=1e-80, Organism=Saccharomyces cerevisiae, GI6322075, Length=301, Percent_Identity=33.5548172757475, Blast_Score=155, Evalue=8e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 42696; Mature: 42565
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQVSSMEKTAEPAALASTLAPSTLTQSASLNLAERLARPELLDLTPYQSARRLGGRGDI CCCHHHHHHHCCHHHHHHHHCCHHHHHHHCCCHHHHHCCCCEECCCCCHHHHHCCCCCCE WINANESPFNNVDTAALDLSKLNRYPECQPPQLIKAYSEYSGVSASKIVASRGADEAIEL EEECCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHHH LIRAFCIPGVDSIACFGPTYGMYAISANTFNVGVKALNLSAEYGLPTSYAEDVCGAKLVF HHHHHHCCCCCCEEECCCCCCEEEEECCEEEECEEEEEEECCCCCCCHHHHHHCCCEEEE ICNPNNPTGTMIDKAIIEQAIKALPDALVVIDEAYIEFCPEYSVADLLKSYPNLVVLRTL EECCCCCCHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHCCCCCHHHHHHHCCCEEEHHHH SKAFALAGARCGFMLANEAVVDIIMRVIAPYPVPLPVSEVATQALSSAGVARMKVQVAQL HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH NEQGARLTAAISAYCSKSNSSDSRARVLKPNGNYVLAEFDDVAKVAALLQGSGVVARAYK CCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEHHHHHHHHHHHCCCCEEEECCC DPRLAKAIRFSFSSKADTDVLVNLFESQRTEQSPETNNK CHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SQVSSMEKTAEPAALASTLAPSTLTQSASLNLAERLARPELLDLTPYQSARRLGGRGDI CCHHHHHHHCCHHHHHHHHCCHHHHHHHCCCHHHHHCCCCEECCCCCHHHHHCCCCCCE WINANESPFNNVDTAALDLSKLNRYPECQPPQLIKAYSEYSGVSASKIVASRGADEAIEL EEECCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHHH LIRAFCIPGVDSIACFGPTYGMYAISANTFNVGVKALNLSAEYGLPTSYAEDVCGAKLVF HHHHHHCCCCCCEEECCCCCCEEEEECCEEEECEEEEEEECCCCCCCHHHHHHCCCEEEE ICNPNNPTGTMIDKAIIEQAIKALPDALVVIDEAYIEFCPEYSVADLLKSYPNLVVLRTL EECCCCCCHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHCCCCCHHHHHHHCCCEEEHHHH SKAFALAGARCGFMLANEAVVDIIMRVIAPYPVPLPVSEVATQALSSAGVARMKVQVAQL HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH NEQGARLTAAISAYCSKSNSSDSRARVLKPNGNYVLAEFDDVAKVAALLQGSGVVARAYK CCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEHHHHHHHHHHHCCCCEEEECCC DPRLAKAIRFSFSSKADTDVLVNLFESQRTEQSPETNNK CHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]