| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174131
Identifier: 126174131
GI number: 126174131
Start: 2212211
End: 2213500
Strand: Direct
Name: 126174131
Synonym: Sbal_1905
Alternate gene names: NA
Gene position: 2212211-2213500 (Clockwise)
Preceding gene: 126174130
Following gene: 126174132
Centisome position: 43.15
GC content: 52.4
Gene sequence:
>1290_bases ATGATTTCTACCGTGTTAACCGACCGCGTCAGAGTTTTCCTCAATCGGTTTCGCCATCGACTTTGGGTTAAACCACTGCT TGTTTGCCTATTATCGATTGCAGTCGCCTTTGTCGCAAAATTGGCAGATGGTACTGAGCTTGTTGAGATTGCACCTAAGG TGTCATCGGCCTCCATCGAGGCGCTGTTATCCGTTATGGCTTCCAGCATGCTGGTTATCGCCACTTTTTCCGTGGGTTCT ATGGTCTCGGCCTATGCTTCGGCGGCTAACACGGCAACACCACGTTCATTTATTTTAGTTGTCGCCGATGATGCCTCTCA AAATGCGCTATCGACCTTTGTTGGGGCATTTATCTTCAGTATTGTGGCACTCACTGCGGTCAAAAATGATTACTTTCAAA CTGCGGGTCTGTTTATCCTCTTCCTGCTGACCACGTTTATTTTTGGCATGGTGATCTTTACCTTTGTACGTTGGGTGGAT CGCATTGCCCGTCTTGGCCGCATGGCAACCACAATTGAGAAAGTTGAAAAGGCGGCGGCAGATGCCCTGACACGGCGACG CAATACTCCACATCTTGGCGGCGTTTCAGTACGTCCCCAAGCGCGTGGACGAGCCGTGTACGCGGCTAACGTCGGTTATG TTCAGTACATTGATATTGCTGCGATGCAGCGCTGGGCAGAGAAAAACGAGGTGCGAGTCGTGATTGCAGCCTTGCCGGGC ACGTTCGCCACGCCCAATCGACCATTGGCATACATTAGCGCCGATGGTGCGGAGCAGACTGAGATTGATTGCACCTGTGT TGCCGAGTCATTCCAGATTGGCGATACCCGTCTTTTTGACGACGATCCGAGATTTGGGTTGGTGGTACTGTCGGAAATCG CTGGCCGCGCCTTATCACCCGCGGTCAATGACCCTGGTACGGCCATTTGCATTATAGGCACACTGGTACGGCTGTTTACC CTATGGGGTGAACCCGCGGCAGTTGATGACAAACCCGCGCCAGAGTGCGATCGCGTAGAAGTCCCTCACGTTTGTGTACA GGACATGTTTGATGATGCGTTTACCGCCATAGCCAGAGACGGCGCGGGAGTGGTGGAAGTCTCTGTACGGCTACAAAAAG CGCTTGAATCGTTAGCATCCAGTGGTGACGGGGAAATACGCGCGGCGGCCGAGTACCACGGTCGGTTAGCACTGAAGCGT TCACAAAAAATGCTTGATATCGAAGAGGACTTGCAAGCCGTACAAGACGCCGCCAAGTTTGCCGAGTCAGCAGCTTCGTC TAACACTTAA
Upstream 100 bases:
>100_bases ATACGCAAAGCCGCACTTAACTCACCGTCAAAGCTGTCGTTTGTGTCCAGCGAACTCATCGCGTCTGCATGAGATTGCAC TCAGCGTAAAGGATATTTAC
Downstream 100 bases:
>100_bases CGAGACATTTATTATTTCGTCGTGCCGTGTATCCGTTTGTTGTTTCTTTCTATTCTGTCAGCACTTTTTGACATTCGGTT TACACACTAGATAAGCGCAA
Product: membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MISTVLTDRVRVFLNRFRHRLWVKPLLVCLLSIAVAFVAKLADGTELVEIAPKVSSASIEALLSVMASSMLVIATFSVGS MVSAYASAANTATPRSFILVVADDASQNALSTFVGAFIFSIVALTAVKNDYFQTAGLFILFLLTTFIFGMVIFTFVRWVD RIARLGRMATTIEKVEKAAADALTRRRNTPHLGGVSVRPQARGRAVYAANVGYVQYIDIAAMQRWAEKNEVRVVIAALPG TFATPNRPLAYISADGAEQTEIDCTCVAESFQIGDTRLFDDDPRFGLVVLSEIAGRALSPAVNDPGTAICIIGTLVRLFT LWGEPAAVDDKPAPECDRVEVPHVCVQDMFDDAFTAIARDGAGVVEVSVRLQKALESLASSGDGEIRAAAEYHGRLALKR SQKMLDIEEDLQAVQDAAKFAESAASSNT
Sequences:
>Translated_429_residues MISTVLTDRVRVFLNRFRHRLWVKPLLVCLLSIAVAFVAKLADGTELVEIAPKVSSASIEALLSVMASSMLVIATFSVGS MVSAYASAANTATPRSFILVVADDASQNALSTFVGAFIFSIVALTAVKNDYFQTAGLFILFLLTTFIFGMVIFTFVRWVD RIARLGRMATTIEKVEKAAADALTRRRNTPHLGGVSVRPQARGRAVYAANVGYVQYIDIAAMQRWAEKNEVRVVIAALPG TFATPNRPLAYISADGAEQTEIDCTCVAESFQIGDTRLFDDDPRFGLVVLSEIAGRALSPAVNDPGTAICIIGTLVRLFT LWGEPAAVDDKPAPECDRVEVPHVCVQDMFDDAFTAIARDGAGVVEVSVRLQKALESLASSGDGEIRAAAEYHGRLALKR SQKMLDIEEDLQAVQDAAKFAESAASSNT >Mature_429_residues MISTVLTDRVRVFLNRFRHRLWVKPLLVCLLSIAVAFVAKLADGTELVEIAPKVSSASIEALLSVMASSMLVIATFSVGS MVSAYASAANTATPRSFILVVADDASQNALSTFVGAFIFSIVALTAVKNDYFQTAGLFILFLLTTFIFGMVIFTFVRWVD RIARLGRMATTIEKVEKAAADALTRRRNTPHLGGVSVRPQARGRAVYAANVGYVQYIDIAAMQRWAEKNEVRVVIAALPG TFATPNRPLAYISADGAEQTEIDCTCVAESFQIGDTRLFDDDPRFGLVVLSEIAGRALSPAVNDPGTAICIIGTLVRLFT LWGEPAAVDDKPAPECDRVEVPHVCVQDMFDDAFTAIARDGAGVVEVSVRLQKALESLASSGDGEIRAAAEYHGRLALKR SQKMLDIEEDLQAVQDAAKFAESAASSNT
Specific function: Unknown
COG id: COG4325
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46264; Mature: 46264
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISTVLTDRVRVFLNRFRHRLWVKPLLVCLLSIAVAFVAKLADGTELVEIAPKVSSASIE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHH ALLSVMASSMLVIATFSVGSMVSAYASAANTATPRSFILVVADDASQNALSTFVGAFIFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH IVALTAVKNDYFQTAGLFILFLLTTFIFGMVIFTFVRWVDRIARLGRMATTIEKVEKAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DALTRRRNTPHLGGVSVRPQARGRAVYAANVGYVQYIDIAAMQRWAEKNEVRVVIAALPG HHHHHCCCCCCCCCEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEECCC TFATPNRPLAYISADGAEQTEIDCTCVAESFQIGDTRLFDDDPRFGLVVLSEIAGRALSP CCCCCCCCEEEEECCCCCCCCCCCEEEECHHCCCCCEECCCCCCHHHHHHHHHHCCCCCC AVNDPGTAICIIGTLVRLFTLWGEPAAVDDKPAPECDRVEVPHVCVQDMFDDAFTAIARD CCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC GAGVVEVSVRLQKALESLASSGDGEIRAAAEYHGRLALKRSQKMLDIEEDLQAVQDAAKF CCCHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AESAASSNT HHHHCCCCC >Mature Secondary Structure MISTVLTDRVRVFLNRFRHRLWVKPLLVCLLSIAVAFVAKLADGTELVEIAPKVSSASIE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHH ALLSVMASSMLVIATFSVGSMVSAYASAANTATPRSFILVVADDASQNALSTFVGAFIFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH IVALTAVKNDYFQTAGLFILFLLTTFIFGMVIFTFVRWVDRIARLGRMATTIEKVEKAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DALTRRRNTPHLGGVSVRPQARGRAVYAANVGYVQYIDIAAMQRWAEKNEVRVVIAALPG HHHHHCCCCCCCCCEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEECCC TFATPNRPLAYISADGAEQTEIDCTCVAESFQIGDTRLFDDDPRFGLVVLSEIAGRALSP CCCCCCCCEEEEECCCCCCCCCCCEEEECHHCCCCCEECCCCCCHHHHHHHHHHCCCCCC AVNDPGTAICIIGTLVRLFTLWGEPAAVDDKPAPECDRVEVPHVCVQDMFDDAFTAIARD CCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC GAGVVEVSVRLQKALESLASSGDGEIRAAAEYHGRLALKRSQKMLDIEEDLQAVQDAAKF CCCHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AESAASSNT HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA