| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174132
Identifier: 126174132
GI number: 126174132
Start: 2213674
End: 2214090
Strand: Direct
Name: 126174132
Synonym: Sbal_1906
Alternate gene names: NA
Gene position: 2213674-2214090 (Clockwise)
Preceding gene: 126174131
Following gene: 126174133
Centisome position: 43.17
GC content: 45.56
Gene sequence:
>417_bases ATGGACTTAATTAAGATTCGTGACCATATGGATCGTCAGCCCGTGTTACTGCGCGCGAATATGTCGCTGGCGACCGCGGT CGAAAAGCTGTTAGATAATAATAAAATGGGTGCTGCAGTGGTTGATGATGCGGGCGATTTGGTGGGCTTTTTATCCCAGC AGGATTGTCTAGCTGTGATGATCAAGAGTAGCTATCACTGCGATATGACATCTGTGGTGAAGGACTGTATGCGCACTGAA GTGCTGTTTGTCGGGCCTGATGACAGTATTTTACAACTCGCCGAACAAATGCTCGGGCCTAAACCTAAGGTTTATCCTGT GGTTGAACACGGTAAAGTGATAGGCACGATAAATCGTACTAATGTGCTCAAAGCGATGAATATCTATATGCAGCAATGTT ATCTGTCACCGGTTTAA
Upstream 100 bases:
>100_bases TTCGGTTTACACACTAGATAAGCGCAATCGATATAAATCGCACATCCTTGCCGATATTTTGACTAGACTTCAAACGTAGG GTTAATTCGAGGGGAAGTCT
Downstream 100 bases:
>100_bases TTTGAGCCGCAGTGGACATAATCTGACAGCCTTTATCCTGAGTGCAGAGTAAATTAGCAATACCATTGCGCCACTTTCCT TGCTAGGATCGCCGTTTTTG
Product: signal transduction protein
Products: NA
Alternate protein names: Signal Transduction Protein; Formate/Nitrite Transporter; CBS Domain Protein; Inosine Monophosphate Dehydrogenase-Related Protein; Signal Transduction Protein With CBS Domains; FOG CBS Domain Protein; Cbs Domain Containing Protein; Inosine Monophosphate Dehydrogenase-Like Protein; CBS Domain Containing Protein; Formate/Nitrite Transporter Family Protein
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MDLIKIRDHMDRQPVLLRANMSLATAVEKLLDNNKMGAAVVDDAGDLVGFLSQQDCLAVMIKSSYHCDMTSVVKDCMRTE VLFVGPDDSILQLAEQMLGPKPKVYPVVEHGKVIGTINRTNVLKAMNIYMQQCYLSPV
Sequences:
>Translated_138_residues MDLIKIRDHMDRQPVLLRANMSLATAVEKLLDNNKMGAAVVDDAGDLVGFLSQQDCLAVMIKSSYHCDMTSVVKDCMRTE VLFVGPDDSILQLAEQMLGPKPKVYPVVEHGKVIGTINRTNVLKAMNIYMQQCYLSPV >Mature_138_residues MDLIKIRDHMDRQPVLLRANMSLATAVEKLLDNNKMGAAVVDDAGDLVGFLSQQDCLAVMIKSSYHCDMTSVVKDCMRTE VLFVGPDDSILQLAEQMLGPKPKVYPVVEHGKVIGTINRTNVLKAMNIYMQQCYLSPV
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15327; Mature: 15327
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 7.2 %Met (Translated Protein) 10.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 7.2 %Met (Mature Protein) 10.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLIKIRDHMDRQPVLLRANMSLATAVEKLLDNNKMGAAVVDDAGDLVGFLSQQDCLAVM CCEEECCCCCCCCCEEEEECCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHCCCHHHHHH IKSSYHCDMTSVVKDCMRTEVLFVGPDDSILQLAEQMLGPKPKVYPVVEHGKVIGTINRT HHCCCCCCHHHHHHHHHHCCEEEECCCHHHHHHHHHHHCCCCCEEEEECCCEEEEECCHH NVLKAMNIYMQQCYLSPV HHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDLIKIRDHMDRQPVLLRANMSLATAVEKLLDNNKMGAAVVDDAGDLVGFLSQQDCLAVM CCEEECCCCCCCCCEEEEECCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHCCCHHHHHH IKSSYHCDMTSVVKDCMRTEVLFVGPDDSILQLAEQMLGPKPKVYPVVEHGKVIGTINRT HHCCCCCCHHHHHHHHHHCCEEEECCCHHHHHHHHHHHCCCCCEEEEECCCEEEEECCHH NVLKAMNIYMQQCYLSPV HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA