| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is yfgD [H]
Identifier: 126174016
GI number: 126174016
Start: 2083379
End: 2083729
Strand: Reverse
Name: yfgD [H]
Synonym: Sbal_1789
Alternate gene names: 126174016
Gene position: 2083729-2083379 (Counterclockwise)
Preceding gene: 126174017
Following gene: 126174015
Centisome position: 40.64
GC content: 49.0
Gene sequence:
>351_bases ATGACCCAAGCGACGATTTACCATAACCCACGTTGTTCAAAAAGCCGTGAAACCTTAGCTCTACTTGAGCAACAAGGTTG CGATATTACCCTAGTGGAATACTTAAAAACGCCCCCTACGGCTGAAGTCATCGGCGATATTCTGGCTAAATTAGGCATCA GTGCTCGCCAATTAATGCGTACCAAGGAAGCGGAATATCAAGCCTTGGAACTTGCCGATACCTCGTTGACGGAGCAGCAA TTGATTGAGGCCATGGTGAACACGCCTAAACTCATCGAACGCCCGATTGTGCTCGCCAATCAACGCGCTGCCATCGGCCG TCCTCCAGAGAATGTGCTCGCTATTCTTTAA
Upstream 100 bases:
>100_bases AATAGCCCATTTATGCGCCCCGAACACACTGACGGGGCGCTGTTTTTTCTGTTATCATCCGCTCCATTGTTATTTCAGCC CGTATTGAGCCTCTAGCACT
Downstream 100 bases:
>100_bases TCCATGATTTTAAAACAAAAATCGCTTTAATTTTAATCCTTAGGTAGACATATGACGTCCAACACCTTATTTACCCTTAG CCGTTTAGGTTACTTCGCGC
Product: arsenate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MTQATIYHNPRCSKSRETLALLEQQGCDITLVEYLKTPPTAEVIGDILAKLGISARQLMRTKEAEYQALELADTSLTEQQ LIEAMVNTPKLIERPIVLANQRAAIGRPPENVLAIL
Sequences:
>Translated_116_residues MTQATIYHNPRCSKSRETLALLEQQGCDITLVEYLKTPPTAEVIGDILAKLGISARQLMRTKEAEYQALELADTSLTEQQ LIEAMVNTPKLIERPIVLANQRAAIGRPPENVLAIL >Mature_115_residues TQATIYHNPRCSKSRETLALLEQQGCDITLVEYLKTPPTAEVIGDILAKLGISARQLMRTKEAEYQALELADTSLTEQQL IEAMVNTPKLIERPIVLANQRAAIGRPPENVLAIL
Specific function: Unknown
COG id: COG1393
COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsC family [H]
Homologues:
Organism=Escherichia coli, GI1788841, Length=115, Percent_Identity=60, Blast_Score=135, Evalue=5e-34, Organism=Escherichia coli, GI1789918, Length=116, Percent_Identity=42.2413793103448, Blast_Score=98, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006659 - InterPro: IPR006660 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF03960 ArsC [H]
EC number: NA
Molecular weight: Translated: 12855; Mature: 12724
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQATIYHNPRCSKSRETLALLEQQGCDITLVEYLKTPPTAEVIGDILAKLGISARQLMR CCCCCEEECCCCCCHHHHHHHHHHCCCCEEHHHHHCCCCCHHHHHHHHHHHCCHHHHHHH TKEAEYQALELADTSLTEQQLIEAMVNTPKLIERPIVLANQRAAIGRPPENVLAIL HHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHCCHHCCCCCCCCCCCCHHHEECC >Mature Secondary Structure TQATIYHNPRCSKSRETLALLEQQGCDITLVEYLKTPPTAEVIGDILAKLGISARQLMR CCCCEEECCCCCCHHHHHHHHHHCCCCEEHHHHHCCCCCHHHHHHHHHHHCCHHHHHHH TKEAEYQALELADTSLTEQQLIEAMVNTPKLIERPIVLANQRAAIGRPPENVLAIL HHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHCCHHCCCCCCCCCCCCHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 10493123 [H]