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The map label for this gene is yfgC [C]

Identifier: 126174017

GI number: 126174017

Start: 2083858

End: 2085327

Strand: Reverse

Name: yfgC [C]

Synonym: Sbal_1790

Alternate gene names: 126174017

Gene position: 2085327-2083858 (Counterclockwise)

Preceding gene: 126174022

Following gene: 126174016

Centisome position: 40.67

GC content: 46.12

Gene sequence:

>1470_bases
TTGCGTAATTTGACTTTTTTGACTCGATTAAAACCTTTTGTTGCAGGCGCACTCTCTTTGATGCTGCTAACCTTCGCCGC
CAAAAGCTTTGCTAACAATGACTTACCGGATTTAGGTACGGCTGCAGTTAATACCTTCAGCCTTGAAAAAGAAATGGTTT
ACGGTGATGCCTATATGCGCATCATTCGCTCTTCGGCGCCTATGTTAAATGATCCCGTGTTAAGTCAATATCTTACTGAG
CTTGGCAACAAACTGGTCGCCCATGCCACAGGGGTAAAAACACCCTTCTATTTCTTCCTGTTACAAAATGATGAAATCAA
CGCCTTCGCCTTCTTCGGCGGCCATGTTGCCGTACACACAGGCTTATTTCTCAATGCCGACAACGAAAGCGAACTCGCCT
CAGTACTCGGTCACGAAATTACCCACGTTACCCAACGTCACCTTGCGCGTTCGCTCGAAGCACAGCAAAAGAGTAATCCA
GCGACGATTGCGGGTTTACTCGGCGCCATTTTATTAACCATCGCTGTGCCACAAGCTGGTATGGCTGCGCTGGCAACGAC
CCAAGCGATGGCAACGCAATCAAAAATCAACTATACCCGTTTACATGAGAAAGAAGCCGACCGCATTGGTATGCAAATTT
TGGTGGATGCAGGCTTTGACCCCAACGCCGCCGCGGATTTCTTTGGTAAGTTAGCCACTCGTTATCGCTTTACCACCACA
CCGCCACAAATGCTGTTAACTCACCCATTACCTGAGTCGCGGATCACCGAAGCCCGTAACCGCGCCGAGCAGTATCCTAA
GCGTTATATTCCCGACAACCTGAATTTCCAGCTGGCGAAAGCCCGTATTCAAGTCCGTTTTTCCAGTTATAGCGACGAAG
CGGTTTTAAGCATGTTTGACAGACAACTGAACAAACAGACTTACAGCTTTAAAGAGGCTGCGCTCTATGGCAAAGCGCTG
GCGTTATTTAGATTGAAGAAGTTTGATGAGTCGGAAAAAATCGTCGATGAACTGTTAAAAATTGATGATAACAACCTGTT
TTATATCGATACTAAAGCCGATTTACTGACCGAACGAAAAGACTACGCGAAAGCGATTGCGATGCTTGAAGCCCAGCGGA
AAATGAAGCCAACATCGCAAGTGATCAACGCCAACTTAGCCAATATCTACCTAGAAGCAGACCAAGCCCCTAAGGCAATC
CCTTTACTAGAAGATATGATATTCCTCGATAAGCAAAATCAGCTGCCCTATCAATTGCTGAGCGCTGTCTATAAAAAAAC
AGGTAATCAGGCATTGGAATATTTTTCCACCGCTGAGCTCATGGCATTAGGGGCTAACTATAAGGGCGCTATCGATCAGC
TTAACTTTGCCTACCGTGCATCCGAAAGTAATCCCTTACAGCTTGCACGTATTGAAGCCCGTATTCGCCAATTCAAAATG
GCCGATAAAGAGATGGAAGCACTTAAGTAA

Upstream 100 bases:

>100_bases
TAGACGAACTTGGGCTATTATCCTAAGTTGCACCTCAAACTACAAGCTAAGTGCAGTATCTCTGCCTTTAGTTGAGATAA
TTAGAAATAAAAGGATCCGC

Downstream 100 bases:

>100_bases
TCAGTTGTTTTATAAATTGATTTAACTTAATAGCCCATTTATGCGCCCCGAACACACTGACGGGGCGCTGTTTTTTCTGT
TATCATCCGCTCCATTGTTA

Product: peptidase M48 Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 489; Mature: 489

Protein sequence:

>489_residues
MRNLTFLTRLKPFVAGALSLMLLTFAAKSFANNDLPDLGTAAVNTFSLEKEMVYGDAYMRIIRSSAPMLNDPVLSQYLTE
LGNKLVAHATGVKTPFYFFLLQNDEINAFAFFGGHVAVHTGLFLNADNESELASVLGHEITHVTQRHLARSLEAQQKSNP
ATIAGLLGAILLTIAVPQAGMAALATTQAMATQSKINYTRLHEKEADRIGMQILVDAGFDPNAAADFFGKLATRYRFTTT
PPQMLLTHPLPESRITEARNRAEQYPKRYIPDNLNFQLAKARIQVRFSSYSDEAVLSMFDRQLNKQTYSFKEAALYGKAL
ALFRLKKFDESEKIVDELLKIDDNNLFYIDTKADLLTERKDYAKAIAMLEAQRKMKPTSQVINANLANIYLEADQAPKAI
PLLEDMIFLDKQNQLPYQLLSAVYKKTGNQALEYFSTAELMALGANYKGAIDQLNFAYRASESNPLQLARIEARIRQFKM
ADKEMEALK

Sequences:

>Translated_489_residues
MRNLTFLTRLKPFVAGALSLMLLTFAAKSFANNDLPDLGTAAVNTFSLEKEMVYGDAYMRIIRSSAPMLNDPVLSQYLTE
LGNKLVAHATGVKTPFYFFLLQNDEINAFAFFGGHVAVHTGLFLNADNESELASVLGHEITHVTQRHLARSLEAQQKSNP
ATIAGLLGAILLTIAVPQAGMAALATTQAMATQSKINYTRLHEKEADRIGMQILVDAGFDPNAAADFFGKLATRYRFTTT
PPQMLLTHPLPESRITEARNRAEQYPKRYIPDNLNFQLAKARIQVRFSSYSDEAVLSMFDRQLNKQTYSFKEAALYGKAL
ALFRLKKFDESEKIVDELLKIDDNNLFYIDTKADLLTERKDYAKAIAMLEAQRKMKPTSQVINANLANIYLEADQAPKAI
PLLEDMIFLDKQNQLPYQLLSAVYKKTGNQALEYFSTAELMALGANYKGAIDQLNFAYRASESNPLQLARIEARIRQFKM
ADKEMEALK
>Mature_489_residues
MRNLTFLTRLKPFVAGALSLMLLTFAAKSFANNDLPDLGTAAVNTFSLEKEMVYGDAYMRIIRSSAPMLNDPVLSQYLTE
LGNKLVAHATGVKTPFYFFLLQNDEINAFAFFGGHVAVHTGLFLNADNESELASVLGHEITHVTQRHLARSLEAQQKSNP
ATIAGLLGAILLTIAVPQAGMAALATTQAMATQSKINYTRLHEKEADRIGMQILVDAGFDPNAAADFFGKLATRYRFTTT
PPQMLLTHPLPESRITEARNRAEQYPKRYIPDNLNFQLAKARIQVRFSSYSDEAVLSMFDRQLNKQTYSFKEAALYGKAL
ALFRLKKFDESEKIVDELLKIDDNNLFYIDTKADLLTERKDYAKAIAMLEAQRKMKPTSQVINANLANIYLEADQAPKAI
PLLEDMIFLDKQNQLPYQLLSAVYKKTGNQALEYFSTAELMALGANYKGAIDQLNFAYRASESNPLQLARIEARIRQFKM
ADKEMEALK

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=471, Percent_Identity=43.5244161358811, Blast_Score=363, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 54802; Mature: 54802

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNLTFLTRLKPFVAGALSLMLLTFAAKSFANNDLPDLGTAAVNTFSLEKEMVYGDAYMR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IIRSSAPMLNDPVLSQYLTELGNKLVAHATGVKTPFYFFLLQNDEINAFAFFGGHVAVHT
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCEEEEEE
GLFLNADNESELASVLGHEITHVTQRHLARSLEAQQKSNPATIAGLLGAILLTIAVPQAG
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC
MAALATTQAMATQSKINYTRLHEKEADRIGMQILVDAGFDPNAAADFFGKLATRYRFTTT
HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHCEEEECC
PPQMLLTHPLPESRITEARNRAEQYPKRYIPDNLNFQLAKARIQVRFSSYSDEAVLSMFD
CHHHHEECCCCHHHHHHHHHHHHHCCHHHCCCCCCEEEEEEEEEEEECCCCCHHHHHHHH
RQLNKQTYSFKEAALYGKALALFRLKKFDESEKIVDELLKIDDNNLFYIDTKADLLTERK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEECHHHHHHHHH
DYAKAIAMLEAQRKMKPTSQVINANLANIYLEADQAPKAIPLLEDMIFLDKQNQLPYQLL
HHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHH
SAVYKKTGNQALEYFSTAELMALGANYKGAIDQLNFAYRASESNPLQLARIEARIRQFKM
HHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHCCHHEECCCCCCHHHHHHHHHHHHHHH
ADKEMEALK
HHHHHHHCC
>Mature Secondary Structure
MRNLTFLTRLKPFVAGALSLMLLTFAAKSFANNDLPDLGTAAVNTFSLEKEMVYGDAYMR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IIRSSAPMLNDPVLSQYLTELGNKLVAHATGVKTPFYFFLLQNDEINAFAFFGGHVAVHT
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCEEEEEE
GLFLNADNESELASVLGHEITHVTQRHLARSLEAQQKSNPATIAGLLGAILLTIAVPQAG
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC
MAALATTQAMATQSKINYTRLHEKEADRIGMQILVDAGFDPNAAADFFGKLATRYRFTTT
HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHCEEEECC
PPQMLLTHPLPESRITEARNRAEQYPKRYIPDNLNFQLAKARIQVRFSSYSDEAVLSMFD
CHHHHEECCCCHHHHHHHHHHHHHCCHHHCCCCCCEEEEEEEEEEEECCCCCHHHHHHHH
RQLNKQTYSFKEAALYGKALALFRLKKFDESEKIVDELLKIDDNNLFYIDTKADLLTERK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEECHHHHHHHHH
DYAKAIAMLEAQRKMKPTSQVINANLANIYLEADQAPKAIPLLEDMIFLDKQNQLPYQLL
HHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHH
SAVYKKTGNQALEYFSTAELMALGANYKGAIDQLNFAYRASESNPLQLARIEARIRQFKM
HHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHCCHHEECCCCCCHHHHHHHHHHHHHHH
ADKEMEALK
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]