| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174015
Identifier: 126174015
GI number: 126174015
Start: 2082953
End: 2083327
Strand: Reverse
Name: 126174015
Synonym: Sbal_1788
Alternate gene names: NA
Gene position: 2083327-2082953 (Counterclockwise)
Preceding gene: 126174016
Following gene: 126174014
Centisome position: 40.63
GC content: 43.73
Gene sequence:
>375_bases ATGACGTCCAACACCTTATTTACCCTTAGCCGTTTAGGTTACTTCGCGCTCGTTCTGCTATTAGGCGGCTGGTTTGTTGG CCAAGGGATTAGCGGAGAATACACTCTGCTATTTAGCCTATTATGGATAGTGCCATTATTACTACCTGCAAAAGGGGTTT TCCAAGGTAATCCATATACTTATGCTTGGGCGAGTTTTGTTCTGTGCCTTTATATGCTGCATGGACTGACACTGCTTTAT GTTACTACCGATGCCTTCGCTTTTGCATTAATCGAAGTATTGTTGATTGGTGTACTGCTGATTGCCTTCCCCTTCTACGC TCGGATCCGTGGTCGTGAACTGGGATTAGGCCTAAAGAAAAAGTCTAAAGAATAA
Upstream 100 bases:
>100_bases ACGCGCTGCCATCGGCCGTCCTCCAGAGAATGTGCTCGCTATTCTTTAATCCATGATTTTAAAACAAAAATCGCTTTAAT TTTAATCCTTAGGTAGACAT
Downstream 100 bases:
>100_bases GCCATTGCATACAATGTGATATCAGTGCCGTCTTACCTTACTGGGTATGACGGCATTTTTATATCGCAACGCCAAACTCC GCTGCAGATCTGGGTTCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MTSNTLFTLSRLGYFALVLLLGGWFVGQGISGEYTLLFSLLWIVPLLLPAKGVFQGNPYTYAWASFVLCLYMLHGLTLLY VTTDAFAFALIEVLLIGVLLIAFPFYARIRGRELGLGLKKKSKE
Sequences:
>Translated_124_residues MTSNTLFTLSRLGYFALVLLLGGWFVGQGISGEYTLLFSLLWIVPLLLPAKGVFQGNPYTYAWASFVLCLYMLHGLTLLY VTTDAFAFALIEVLLIGVLLIAFPFYARIRGRELGLGLKKKSKE >Mature_123_residues TSNTLFTLSRLGYFALVLLLGGWFVGQGISGEYTLLFSLLWIVPLLLPAKGVFQGNPYTYAWASFVLCLYMLHGLTLLYV TTDAFAFALIEVLLIGVLLIAFPFYARIRGRELGLGLKKKSKE
Specific function: Unknown
COG id: COG3308
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13817; Mature: 13686
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSNTLFTLSRLGYFALVLLLGGWFVGQGISGEYTLLFSLLWIVPLLLPAKGVFQGNPYT CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCH YAWASFVLCLYMLHGLTLLYVTTDAFAFALIEVLLIGVLLIAFPFYARIRGRELGLGLKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCC KSKE CCCC >Mature Secondary Structure TSNTLFTLSRLGYFALVLLLGGWFVGQGISGEYTLLFSLLWIVPLLLPAKGVFQGNPYT CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCH YAWASFVLCLYMLHGLTLLYVTTDAFAFALIEVLLIGVLLIAFPFYARIRGRELGLGLKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCC KSKE CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA