| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is ycjX [H]
Identifier: 126173854
GI number: 126173854
Start: 1891137
End: 1892597
Strand: Direct
Name: ycjX [H]
Synonym: Sbal_1620
Alternate gene names: 126173854
Gene position: 1891137-1892597 (Clockwise)
Preceding gene: 126173853
Following gene: 126173855
Centisome position: 36.88
GC content: 48.8
Gene sequence:
>1461_bases ATGGGAATGCTTGATGCCTCGCTCCATAAATTAACCCAAAAGGGACAATCCCTGTTACATCGCACCGCGGACCGGCATTT ACGTTTGGCCGTGACTGGGCTTTCTGGTGCGGGAAAAACCGCGTTTATCACAGGGTTAGTCAATCAGTTACTTAATTCTG GTCCTGTCTCAACCTTACCCCACGCCCGCAACAACAGCGCTTTGCCACTGTGGCAGGTGAGCCGCGATCAGCGTTTGCTC GGGGTTAAACGTGCCATGCAGCCGGATCTGGAAATCGCCAGTTTTGATTATCAAGGCGCCATGTTAGCGCTCACTTCCGA TCCTGCGACATGGCCAGCCTCCACTCGCACTATTTCTGAATTACGACTGGCGATTAAATACCGACCGCAAAAGGGCTTAC TGGCCAAGTTTTCTGATACCGCCACCTTGTATTTAGACATAGTCGATTATCCTGGCGAATGGTTACTCGATTTACCTATG CTGCGCCAAGACTTCGTTACTTGGTGCTGTGCCCAACAAGTTCGCATCGAGAATCTTAAAAGCTCACCCTTGTATGCTGA GTTTGAACAATCTTTGATGTCATTAGATTTAGCCGTCAGCGCCGATGAGCAGCAATTAAAGCGGATTGCCGATCAATATC AGTTATTACTCAATGATTTAGTGCACGTGCAAGGTTATTACCAAGCGCAGCCTGGACGCATGTTATTGCCGGGTGAATGG CAGGGCGCTCCCTTATTGGCTTTTTTCCCCCTGTTATTGGTCAATGATGAAAAGTTCGCAGCGCTTTCGCAAAGCGATAA ACACAGTGGATTCCACGTCCTGGAAAAACGCTATCAAGAATACGTCGCTAAAGTGGTTAAGCCTTTCTATAAAAACCACT TTGCCGGTTTTGATCGGCAACTCGTGTTAGTTGACTGTTTTAGTGCGTTGAATCGTGGTAAAAAGCAATTTGAGGATATG GGCGCGGCGCTCAATGCCATTATGGAAAGCTTTCAGTTTGGCCAATCGAGTTATTTAAGGCGTTTATTTGCTCCCCGCAT CGACCGTTTGTTGTTTGCTGCGAGCAAGGTTGACCATGTGACGCGCGATCAGCAGAGCCATGTTTTGTCCCTGCTGACAG ATATGTTGAAACACAGCCAGCATTTTGCCAGTTTCGATGGTTGTAAAGTGGAGACAATGGCGATTAGCGCCATTAAGGCG ACTCGCCATGGCATGGTAACGACCCAGGAGGGTGAGGTCGAAGTCGTGCAGGGGACGGGACTCAATGGTAAAGCCCTGAC CTTGTTTCCAGGCGAAGTGCCCACTCGCTTACCTGAGCCTGATTTTTGGCGTGACCAAGGGTTTAACTTTGTCGGCTTTG CACCGCCGAGTAATGCCAATGCTGACCCATCTCAAGTGGACTTTGACCATATTCGTCTCGATCATTTGCTGCAGTACTTA CTGGGAGATAAGTTGGAATGA
Upstream 100 bases:
>100_bases CGGCCATGTCCGCCCTTGTTGCTTAATCTCTGTTTCACTCCAGTGTATAGTCAACATCACTTGACATAAGTTAACATCAT TCGACATAAGGGAAGTCTCT
Downstream 100 bases:
>100_bases CGCTAAAGCTATCGGATAACGCTAATGAGCAGGGCTCCAATTCTTCTGCCAACGCCTTTGAACGCTCGGCTGAACATAAG CCGCTGAAAAAGCAGCAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 486; Mature: 485
Protein sequence:
>486_residues MGMLDASLHKLTQKGQSLLHRTADRHLRLAVTGLSGAGKTAFITGLVNQLLNSGPVSTLPHARNNSALPLWQVSRDQRLL GVKRAMQPDLEIASFDYQGAMLALTSDPATWPASTRTISELRLAIKYRPQKGLLAKFSDTATLYLDIVDYPGEWLLDLPM LRQDFVTWCCAQQVRIENLKSSPLYAEFEQSLMSLDLAVSADEQQLKRIADQYQLLLNDLVHVQGYYQAQPGRMLLPGEW QGAPLLAFFPLLLVNDEKFAALSQSDKHSGFHVLEKRYQEYVAKVVKPFYKNHFAGFDRQLVLVDCFSALNRGKKQFEDM GAALNAIMESFQFGQSSYLRRLFAPRIDRLLFAASKVDHVTRDQQSHVLSLLTDMLKHSQHFASFDGCKVETMAISAIKA TRHGMVTTQEGEVEVVQGTGLNGKALTLFPGEVPTRLPEPDFWRDQGFNFVGFAPPSNANADPSQVDFDHIRLDHLLQYL LGDKLE
Sequences:
>Translated_486_residues MGMLDASLHKLTQKGQSLLHRTADRHLRLAVTGLSGAGKTAFITGLVNQLLNSGPVSTLPHARNNSALPLWQVSRDQRLL GVKRAMQPDLEIASFDYQGAMLALTSDPATWPASTRTISELRLAIKYRPQKGLLAKFSDTATLYLDIVDYPGEWLLDLPM LRQDFVTWCCAQQVRIENLKSSPLYAEFEQSLMSLDLAVSADEQQLKRIADQYQLLLNDLVHVQGYYQAQPGRMLLPGEW QGAPLLAFFPLLLVNDEKFAALSQSDKHSGFHVLEKRYQEYVAKVVKPFYKNHFAGFDRQLVLVDCFSALNRGKKQFEDM GAALNAIMESFQFGQSSYLRRLFAPRIDRLLFAASKVDHVTRDQQSHVLSLLTDMLKHSQHFASFDGCKVETMAISAIKA TRHGMVTTQEGEVEVVQGTGLNGKALTLFPGEVPTRLPEPDFWRDQGFNFVGFAPPSNANADPSQVDFDHIRLDHLLQYL LGDKLE >Mature_485_residues GMLDASLHKLTQKGQSLLHRTADRHLRLAVTGLSGAGKTAFITGLVNQLLNSGPVSTLPHARNNSALPLWQVSRDQRLLG VKRAMQPDLEIASFDYQGAMLALTSDPATWPASTRTISELRLAIKYRPQKGLLAKFSDTATLYLDIVDYPGEWLLDLPML RQDFVTWCCAQQVRIENLKSSPLYAEFEQSLMSLDLAVSADEQQLKRIADQYQLLLNDLVHVQGYYQAQPGRMLLPGEWQ GAPLLAFFPLLLVNDEKFAALSQSDKHSGFHVLEKRYQEYVAKVVKPFYKNHFAGFDRQLVLVDCFSALNRGKKQFEDMG AALNAIMESFQFGQSSYLRRLFAPRIDRLLFAASKVDHVTRDQQSHVLSLLTDMLKHSQHFASFDGCKVETMAISAIKAT RHGMVTTQEGEVEVVQGTGLNGKALTLFPGEVPTRLPEPDFWRDQGFNFVGFAPPSNANADPSQVDFDHIRLDHLLQYLL GDKLE
Specific function: Unknown
COG id: COG3106
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_1637 [H]
Homologues:
Organism=Escherichia coli, GI1787581, Length=480, Percent_Identity=44.7916666666667, Blast_Score=395, Evalue=1e-111,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007413 [H]
Pfam domain/function: PF04317 DUF463 [H]
EC number: NA
Molecular weight: Translated: 54522; Mature: 54391
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMLDASLHKLTQKGQSLLHRTADRHLRLAVTGLSGAGKTAFITGLVNQLLNSGPVSTLP CCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCC HARNNSALPLWQVSRDQRLLGVKRAMQPDLEIASFDYQGAMLALTSDPATWPASTRTISE CCCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCHHHHHH LRLAIKYRPQKGLLAKFSDTATLYLDIVDYPGEWLLDLPMLRQDFVTWCCAQQVRIENLK HHHHHEECCCCCCEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC SSPLYAEFEQSLMSLDLAVSADEQQLKRIADQYQLLLNDLVHVQGYYQAQPGRMLLPGEW CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCEECCCCC QGAPLLAFFPLLLVNDEKFAALSQSDKHSGFHVLEKRYQEYVAKVVKPFYKNHFAGFDRQ CCCCHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH LVLVDCFSALNRGKKQFEDMGAALNAIMESFQFGQSSYLRRLFAPRIDRLLFAASKVDHV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH TRDQQSHVLSLLTDMLKHSQHFASFDGCKVETMAISAIKATRHGMVTTQEGEVEVVQGTG HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCEEECCCCEEEEECCC LNGKALTLFPGEVPTRLPEPDFWRDQGFNFVGFAPPSNANADPSQVDFDHIRLDHLLQYL CCCCEEEEECCCCCCCCCCCCCHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH LGDKLE HCCCCC >Mature Secondary Structure GMLDASLHKLTQKGQSLLHRTADRHLRLAVTGLSGAGKTAFITGLVNQLLNSGPVSTLP CCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCC HARNNSALPLWQVSRDQRLLGVKRAMQPDLEIASFDYQGAMLALTSDPATWPASTRTISE CCCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCHHHHHH LRLAIKYRPQKGLLAKFSDTATLYLDIVDYPGEWLLDLPMLRQDFVTWCCAQQVRIENLK HHHHHEECCCCCCEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC SSPLYAEFEQSLMSLDLAVSADEQQLKRIADQYQLLLNDLVHVQGYYQAQPGRMLLPGEW CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCEECCCCC QGAPLLAFFPLLLVNDEKFAALSQSDKHSGFHVLEKRYQEYVAKVVKPFYKNHFAGFDRQ CCCCHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH LVLVDCFSALNRGKKQFEDMGAALNAIMESFQFGQSSYLRRLFAPRIDRLLFAASKVDHV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH TRDQQSHVLSLLTDMLKHSQHFASFDGCKVETMAISAIKATRHGMVTTQEGEVEVVQGTG HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCEEECCCCEEEEECCC LNGKALTLFPGEVPTRLPEPDFWRDQGFNFVGFAPPSNANADPSQVDFDHIRLDHLLQYL CCCCEEEEECCCCCCCCCCCCCHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH LGDKLE HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]