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The map label for this gene is ycjF [C]

Identifier: 126173855

GI number: 126173855

Start: 1892594

End: 1893814

Strand: Direct

Name: ycjF [C]

Synonym: Sbal_1621

Alternate gene names: 126173855

Gene position: 1892594-1893814 (Clockwise)

Preceding gene: 126173854

Following gene: 126173856

Centisome position: 36.91

GC content: 48.81

Gene sequence:

>1221_bases
ATGACGCTAAAGCTATCGGATAACGCTAATGAGCAGGGCTCCAATTCTTCTGCCAACGCCTTTGAACGCTCGGCTGAACA
TAAGCCGCTGAAAAAGCAGCAGCTGTTTGACCCACAAGTTGTTGAGCTCAAACCCAACAAAGAGGAACTCAAAGGGGCGA
AAGCTTTTGATCCGCATACACCAGTGCAAGAAGTGGCTGCCGATATTGAGGAATTGATGGATGAAACGCTGTCATCCCAT
CCTAAAATGATCGATGCTAAATCGGTATCGCCTCAACTTGTAAAATCACGCCGTTGGTCTTGGCTCGCTCGTCTGGCGGT
AACGAGTTTATTGCTGCTCGTAGTGGTTCAAACGGGATTAGGATTGAGGGATGCTTGGCTTGAGAGCCCTTGGTTGTTCA
GTTTTTATGGTGTGGTGCTTGGGGTCGTCAGTGCGTGGGCATTGGCGAGGGCGTTTAGTGAGTACCGCAAACTGAAGCGA
CTCAAACAGGTTGCCGATACCCAAGAAACAGGCGCTAGGCTGGCGCAGAGCATGCAAATGGGTGAGGCAGACAGTTTTAT
CGATAACATAGTGTGCCACTATGGCGACAGCCAAGGTTTGCAGCAACTTCGCAGCTCATTAAAAGATGAACATAATGATG
CCGAGAAAGTCTTGTTATTCGAGGACTTAGTGCTGACGGAGCGAGATGAACTGGCCAAAAAAGTCGTGCGACGTTATGCG
GCTGAGTCGGCAGTGCTACTGGCGGCCAGTCCGTTAGCTGTGCTCGATATGGCCATCATCCTTTGGCGTAATCAACGTAT
GCTGCGTGATGTCGCCCGCTGTTATGGCATAGAGCTTGGTTATTGGAGCCGGATTAAACTTATCCGCAGTATCATCATCA
ATATTATTTATGCGGGCACCAGTGAGTTAGTTACTGATTTAGGAACACAGCTGTTATCGGTTGAAATGACAGGTAAATTG
TCTGCTCGCTTGGCCCAAGGCTTAGGGGGCGGCATGCTAACTGCGCGCCTTGGATATCAAGCCATGGCGCTGTGTCGGCC
GATTGTGTTTAGGGAAGAGCAAAGGCCTAAATTGTCTAAAGTGCATCAGGAATTGTTGATCGAACTGAAGCAGTTTTCAG
GCAAGTTGTTTACCAAGGAAGGCCGCGACGCATTAAAAGGCCAGTTCGCCGATGTTGATGACAAAGTACCTCAGTCAGCT
AAAGATAAATCTAAAGAGTAG

Upstream 100 bases:

>100_bases
TTGCACCGCCGAGTAATGCCAATGCTGACCCATCTCAAGTGGACTTTGACCATATTCGTCTCGATCATTTGCTGCAGTAC
TTACTGGGAGATAAGTTGGA

Downstream 100 bases:

>100_bases
ATATTATTTAATATCAAACAGTTAACTGATTTAAATCGGCCGAAAGTAGATGCGCTAATGGACTTGTTCCTTAGCGCATT
TTTTTTATGATTTTTTGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MTLKLSDNANEQGSNSSANAFERSAEHKPLKKQQLFDPQVVELKPNKEELKGAKAFDPHTPVQEVAADIEELMDETLSSH
PKMIDAKSVSPQLVKSRRWSWLARLAVTSLLLLVVVQTGLGLRDAWLESPWLFSFYGVVLGVVSAWALARAFSEYRKLKR
LKQVADTQETGARLAQSMQMGEADSFIDNIVCHYGDSQGLQQLRSSLKDEHNDAEKVLLFEDLVLTERDELAKKVVRRYA
AESAVLLAASPLAVLDMAIILWRNQRMLRDVARCYGIELGYWSRIKLIRSIIINIIYAGTSELVTDLGTQLLSVEMTGKL
SARLAQGLGGGMLTARLGYQAMALCRPIVFREEQRPKLSKVHQELLIELKQFSGKLFTKEGRDALKGQFADVDDKVPQSA
KDKSKE

Sequences:

>Translated_406_residues
MTLKLSDNANEQGSNSSANAFERSAEHKPLKKQQLFDPQVVELKPNKEELKGAKAFDPHTPVQEVAADIEELMDETLSSH
PKMIDAKSVSPQLVKSRRWSWLARLAVTSLLLLVVVQTGLGLRDAWLESPWLFSFYGVVLGVVSAWALARAFSEYRKLKR
LKQVADTQETGARLAQSMQMGEADSFIDNIVCHYGDSQGLQQLRSSLKDEHNDAEKVLLFEDLVLTERDELAKKVVRRYA
AESAVLLAASPLAVLDMAIILWRNQRMLRDVARCYGIELGYWSRIKLIRSIIINIIYAGTSELVTDLGTQLLSVEMTGKL
SARLAQGLGGGMLTARLGYQAMALCRPIVFREEQRPKLSKVHQELLIELKQFSGKLFTKEGRDALKGQFADVDDKVPQSA
KDKSKE
>Mature_405_residues
TLKLSDNANEQGSNSSANAFERSAEHKPLKKQQLFDPQVVELKPNKEELKGAKAFDPHTPVQEVAADIEELMDETLSSHP
KMIDAKSVSPQLVKSRRWSWLARLAVTSLLLLVVVQTGLGLRDAWLESPWLFSFYGVVLGVVSAWALARAFSEYRKLKRL
KQVADTQETGARLAQSMQMGEADSFIDNIVCHYGDSQGLQQLRSSLKDEHNDAEKVLLFEDLVLTERDELAKKVVRRYAA
ESAVLLAASPLAVLDMAIILWRNQRMLRDVARCYGIELGYWSRIKLIRSIIINIIYAGTSELVTDLGTQLLSVEMTGKLS
ARLAQGLGGGMLTARLGYQAMALCRPIVFREEQRPKLSKVHQELLIELKQFSGKLFTKEGRDALKGQFADVDDKVPQSAK
DKSKE

Specific function: Unknown

COG id: COG3768

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0283 family [H]

Homologues:

Organism=Escherichia coli, GI1787582, Length=357, Percent_Identity=33.0532212885154, Blast_Score=166, Evalue=3e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021147
- InterPro:   IPR006507 [H]

Pfam domain/function: PF05128 DUF697 [H]

EC number: NA

Molecular weight: Translated: 45427; Mature: 45296

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKLSDNANEQGSNSSANAFERSAEHKPLKKQQLFDPQVVELKPNKEELKGAKAFDPHT
CEEECCCCCCCCCCCCCHHHHHHHHCCCCCHHHHCCCCCEEEECCCHHHHCCCCCCCCCC
PVQEVAADIEELMDETLSSHPKMIDAKSVSPQLVKSRRWSWLARLAVTSLLLLVVVQTGL
CHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GLRDAWLESPWLFSFYGVVLGVVSAWALARAFSEYRKLKRLKQVADTQETGARLAQSMQM
CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GEADSFIDNIVCHYGDSQGLQQLRSSLKDEHNDAEKVLLFEDLVLTERDELAKKVVRRYA
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AESAVLLAASPLAVLDMAIILWRNQRMLRDVARCYGIELGYWSRIKLIRSIIINIIYAGT
HHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCH
SELVTDLGTQLLSVEMTGKLSARLAQGLGGGMLTARLGYQAMALCRPIVFREEQRPKLSK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
VHQELLIELKQFSGKLFTKEGRDALKGQFADVDDKVPQSAKDKSKE
HHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TLKLSDNANEQGSNSSANAFERSAEHKPLKKQQLFDPQVVELKPNKEELKGAKAFDPHT
EEECCCCCCCCCCCCCHHHHHHHHCCCCCHHHHCCCCCEEEECCCHHHHCCCCCCCCCC
PVQEVAADIEELMDETLSSHPKMIDAKSVSPQLVKSRRWSWLARLAVTSLLLLVVVQTGL
CHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GLRDAWLESPWLFSFYGVVLGVVSAWALARAFSEYRKLKRLKQVADTQETGARLAQSMQM
CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GEADSFIDNIVCHYGDSQGLQQLRSSLKDEHNDAEKVLLFEDLVLTERDELAKKVVRRYA
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AESAVLLAASPLAVLDMAIILWRNQRMLRDVARCYGIELGYWSRIKLIRSIIINIIYAGT
HHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCH
SELVTDLGTQLLSVEMTGKLSARLAQGLGGGMLTARLGYQAMALCRPIVFREEQRPKLSK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
VHQELLIELKQFSGKLFTKEGRDALKGQFADVDDKVPQSAKDKSKE
HHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]