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The map label for this gene is pspC [H]

Identifier: 126173853

GI number: 126173853

Start: 1890637

End: 1891023

Strand: Direct

Name: pspC [H]

Synonym: Sbal_1619

Alternate gene names: 126173853

Gene position: 1890637-1891023 (Clockwise)

Preceding gene: 126173852

Following gene: 126173854

Centisome position: 36.87

GC content: 45.48

Gene sequence:

>387_bases
ATGAGAGGATCTAATGGCCGTACTTTGTACCGCATTCCCCAGTCAGGCAAAATAGCGGGTGTATGTGCAGGGATTGCCGA
GTACTTTGCGATTGAAACTTGGTTAGTGCGAGTACTGGCTGTGTCTATCTTCTTACTCGGCGGCTCAGGTGTGGTATTTA
TCATCTATGTCGCTTTATGGGTGATTTTAGACATCAAGCCGCAAAAGCATTACGATAGAGACGATATCGAGGTGAAGAAG
AAGCCGTGGCAGTCGGGAGAACCCGCAAAGCAAGCGCTGAGCGACGTGAGTCGTCAATTTCGAAGTCTGGAAGTTAGGCT
ACAAAATTTAGAACGTCACGTCACCTCTGACAACTTTGATTTAAAAAGACAAATCAATAGTTTGTAA

Upstream 100 bases:

>100_bases
CAACTCAATGACTTGATATCCAAGGCCGATAAAATGGCGGCGCGTATCGAGACCTTAGAGGCCATTCTGGATACAGAATC
GCCCGAATGGAGGGGGAAAC

Downstream 100 bases:

>100_bases
CCCTTCTAAAGGGCGGCCATGTCCGCCCTTGTTGCTTAATCTCTGTTTCACTCCAGTGTATAGTCAACATCACTTGACAT
AAGTTAACATCATTCGACAT

Product: phage shock protein C, PspC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MRGSNGRTLYRIPQSGKIAGVCAGIAEYFAIETWLVRVLAVSIFLLGGSGVVFIIYVALWVILDIKPQKHYDRDDIEVKK
KPWQSGEPAKQALSDVSRQFRSLEVRLQNLERHVTSDNFDLKRQINSL

Sequences:

>Translated_128_residues
MRGSNGRTLYRIPQSGKIAGVCAGIAEYFAIETWLVRVLAVSIFLLGGSGVVFIIYVALWVILDIKPQKHYDRDDIEVKK
KPWQSGEPAKQALSDVSRQFRSLEVRLQNLERHVTSDNFDLKRQINSL
>Mature_128_residues
MRGSNGRTLYRIPQSGKIAGVCAGIAEYFAIETWLVRVLAVSIFLLGGSGVVFIIYVALWVILDIKPQKHYDRDDIEVKK
KPWQSGEPAKQALSDVSRQFRSLEVRLQNLERHVTSDNFDLKRQINSL

Specific function: The phage shock protein (psp) operon (pspABCDE) may play a significant role in the competition for survival under nutrient- or energy-limited conditions. PspC is involved in transcription regulation [H]

COG id: COG1983

COG function: function code KT; Putative stress-responsive transcriptional regulator

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspC family [H]

Homologues:

Organism=Escherichia coli, GI1787564, Length=129, Percent_Identity=36.4341085271318, Blast_Score=76, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007168
- InterPro:   IPR014320 [H]

Pfam domain/function: PF04024 PspC [H]

EC number: NA

Molecular weight: Translated: 14545; Mature: 14545

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGSNGRTLYRIPQSGKIAGVCAGIAEYFAIETWLVRVLAVSIFLLGGSGVVFIIYVALW
CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VILDIKPQKHYDRDDIEVKKKPWQSGEPAKQALSDVSRQFRSLEVRLQNLERHVTSDNFD
HHHCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
LKRQINSL
HHHHHCCC
>Mature Secondary Structure
MRGSNGRTLYRIPQSGKIAGVCAGIAEYFAIETWLVRVLAVSIFLLGGSGVVFIIYVALW
CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VILDIKPQKHYDRDDIEVKKKPWQSGEPAKQALSDVSRQFRSLEVRLQNLERHVTSDNFD
HHHCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
LKRQINSL
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]