Definition Shewanella baltica OS155 chromosome, complete genome.
Accession NC_009052
Length 5,127,376

Click here to switch to the map view.

The map label for this gene is 126173329

Identifier: 126173329

GI number: 126173329

Start: 1252418

End: 1253581

Strand: Direct

Name: 126173329

Synonym: Sbal_1087

Alternate gene names: NA

Gene position: 1252418-1253581 (Clockwise)

Preceding gene: 126173328

Following gene: 126173330

Centisome position: 24.43

GC content: 48.54

Gene sequence:

>1164_bases
ATGGGGACGACACAGACAAATGCAATTGCTCCAGTAAAGGTGAATAAACCTAGGTTGATGTCGCTGGATGCACTGCGCGG
CTTCGATATGTTTTGGATTTTGGGCGGTGAGGCTTTGTTTGGTGGTTTGCTTATTCTAACTGGCTGGGCAGGCTGGGCAG
GCTGGCAATGGGGCGATGAACAGATGCACCATAGCCAATGGCATGGTTTTCACTTCTACGATTTGATTTTTCCGCTGTTT
ATTTTCCTCTCTGGTGTGGCCTTAGGTTTATCCCCTAAACGTTTAGATAAATTACCTATGAAGGAGCGATTACCTGTGTA
TCGTCATGGGATTAAACGACTCTTTTTATTGCTGTTACTGGGCATTTTATACAATCACGGTTGGGGAACGGGCGCGCCTG
CCGATCCTGAAAAAATTCGCTATGCCAGTGTGTTAGGTCGAATCGCCTTTGCATGGTTTTTTGCCGCATTATTGGTGTGG
CACACAAGTCTACGAACCCAAATTATCGTCGCCTTGGGCATTTTGCTCGGTTATGGCGCAATGCAACTTTGGTTGCCTTT
CCCAGGTGGACAGGCGGGTGTGCTCTCGCCAACGGAATCCATCAATGCCTATGTCGATTCGATTTTATTACCCGGCGTGA
GCTATCAGGGACGCACACCCGATCCTGAAGGTTTACTGTCGACCATCCCCGCCATAGTCAATGCGTTAGCTGGCGTGTTT
GTCGGCCACTTTATTGTTAAATCCCATCCTAAAGGTGAGTGGGCCAAAGTGGGATTGCTCGCCGCTGCGGGTTGCGTTTG
TTTAACCTTCGGTTGGCTGTTGGATCTTGTCATTCCGGTCAATAAAGAGCTGTGGACCAGTTCATTTGTGCTGGTGACGT
CGGGCTGGAGCATGATACTGCTGGCGCTATTCTATGCCTTAGTCGATGTGCTTAAGTGGCAAAAAGCCGCATTTTTCTTC
GTGGTGATAGGCACCAACGCCATCATTATTTACTTAGCGTCTAGCTTAGTGGATTGGAAATATATCGCTCAAAGCGTGTT
TGGCGGCTTAGTGCTGGCCTTGCCTGAAAGCGCTCAAGCGTTAGCTGCGGTTATCAGCTTGCTCGCGGTGCAGTGGCTGG
TTTTATATTGGATGTATCGCCGCAATATTTTTGTCAGAATTTAG

Upstream 100 bases:

>100_bases
AGGGGCTAAGTTTTTTTTTTGTACAGCACTAATTTTAAACAGTATTAGTTTTGCTCAACTTTTATAAAAGCTTTTAATAA
CAATAATAAAGGATGATGGC

Downstream 100 bases:

>100_bases
TCAGTTGGCTTAATCGCTTGAGATCAGCCGCACGCACTCAGTGTCTGCGGCTTTTTTTACATTATTTTATGGATGTGAGT
TACAACTTAGCTATCGGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MGTTQTNAIAPVKVNKPRLMSLDALRGFDMFWILGGEALFGGLLILTGWAGWAGWQWGDEQMHHSQWHGFHFYDLIFPLF
IFLSGVALGLSPKRLDKLPMKERLPVYRHGIKRLFLLLLLGILYNHGWGTGAPADPEKIRYASVLGRIAFAWFFAALLVW
HTSLRTQIIVALGILLGYGAMQLWLPFPGGQAGVLSPTESINAYVDSILLPGVSYQGRTPDPEGLLSTIPAIVNALAGVF
VGHFIVKSHPKGEWAKVGLLAAAGCVCLTFGWLLDLVIPVNKELWTSSFVLVTSGWSMILLALFYALVDVLKWQKAAFFF
VVIGTNAIIIYLASSLVDWKYIAQSVFGGLVLALPESAQALAAVISLLAVQWLVLYWMYRRNIFVRI

Sequences:

>Translated_387_residues
MGTTQTNAIAPVKVNKPRLMSLDALRGFDMFWILGGEALFGGLLILTGWAGWAGWQWGDEQMHHSQWHGFHFYDLIFPLF
IFLSGVALGLSPKRLDKLPMKERLPVYRHGIKRLFLLLLLGILYNHGWGTGAPADPEKIRYASVLGRIAFAWFFAALLVW
HTSLRTQIIVALGILLGYGAMQLWLPFPGGQAGVLSPTESINAYVDSILLPGVSYQGRTPDPEGLLSTIPAIVNALAGVF
VGHFIVKSHPKGEWAKVGLLAAAGCVCLTFGWLLDLVIPVNKELWTSSFVLVTSGWSMILLALFYALVDVLKWQKAAFFF
VVIGTNAIIIYLASSLVDWKYIAQSVFGGLVLALPESAQALAAVISLLAVQWLVLYWMYRRNIFVRI
>Mature_386_residues
GTTQTNAIAPVKVNKPRLMSLDALRGFDMFWILGGEALFGGLLILTGWAGWAGWQWGDEQMHHSQWHGFHFYDLIFPLFI
FLSGVALGLSPKRLDKLPMKERLPVYRHGIKRLFLLLLLGILYNHGWGTGAPADPEKIRYASVLGRIAFAWFFAALLVWH
TSLRTQIIVALGILLGYGAMQLWLPFPGGQAGVLSPTESINAYVDSILLPGVSYQGRTPDPEGLLSTIPAIVNALAGVFV
GHFIVKSHPKGEWAKVGLLAAAGCVCLTFGWLLDLVIPVNKELWTSSFVLVTSGWSMILLALFYALVDVLKWQKAAFFFV
VIGTNAIIIYLASSLVDWKYIAQSVFGGLVLALPESAQALAAVISLLAVQWLVLYWMYRRNIFVRI

Specific function: Unknown

COG id: COG4299

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI150378452, Length=436, Percent_Identity=26.3761467889908, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24639786, Length=377, Percent_Identity=25.7294429708223, Blast_Score=84, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42799; Mature: 42668

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTTQTNAIAPVKVNKPRLMSLDALRGFDMFWILGGEALFGGLLILTGWAGWAGWQWGDE
CCCCCCCCEEEEECCCCCEEEHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCHH
QMHHSQWHGFHFYDLIFPLFIFLSGVALGLSPKRLDKLPMKERLPVYRHGIKRLFLLLLL
HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHCCCHHHHHHHHHHHHHHH
GILYNHGWGTGAPADPEKIRYASVLGRIAFAWFFAALLVWHTSLRTQIIVALGILLGYGA
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
MQLWLPFPGGQAGVLSPTESINAYVDSILLPGVSYQGRTPDPEGLLSTIPAIVNALAGVF
HEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VGHFIVKSHPKGEWAKVGLLAAAGCVCLTFGWLLDLVIPVNKELWTSSFVLVTSGWSMIL
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEEECCHHHHH
LALFYALVDVLKWQKAAFFFVVIGTNAIIIYLASSLVDWKYIAQSVFGGLVLALPESAQA
HHHHHHHHHHHHHHHHEEEEEEECCCEEEEHHHHHHHHHHHHHHHHHCCEEEECCCHHHH
LAAVISLLAVQWLVLYWMYRRNIFVRI
HHHHHHHHHHHHHHHHHHHHCCEEEEC
>Mature Secondary Structure 
GTTQTNAIAPVKVNKPRLMSLDALRGFDMFWILGGEALFGGLLILTGWAGWAGWQWGDE
CCCCCCCEEEEECCCCCEEEHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCHH
QMHHSQWHGFHFYDLIFPLFIFLSGVALGLSPKRLDKLPMKERLPVYRHGIKRLFLLLLL
HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHCCCHHHHHHHHHHHHHHH
GILYNHGWGTGAPADPEKIRYASVLGRIAFAWFFAALLVWHTSLRTQIIVALGILLGYGA
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
MQLWLPFPGGQAGVLSPTESINAYVDSILLPGVSYQGRTPDPEGLLSTIPAIVNALAGVF
HEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VGHFIVKSHPKGEWAKVGLLAAAGCVCLTFGWLLDLVIPVNKELWTSSFVLVTSGWSMIL
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEEECCHHHHH
LALFYALVDVLKWQKAAFFFVVIGTNAIIIYLASSLVDWKYIAQSVFGGLVLALPESAQA
HHHHHHHHHHHHHHHHEEEEEEECCCEEEEHHHHHHHHHHHHHHHHHCCEEEECCCHHHH
LAAVISLLAVQWLVLYWMYRRNIFVRI
HHHHHHHHHHHHHHHHHHHHCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA