| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is gluP [H]
Identifier: 126173330
GI number: 126173330
Start: 1253899
End: 1255197
Strand: Direct
Name: gluP [H]
Synonym: Sbal_1088
Alternate gene names: 126173330
Gene position: 1253899-1255197 (Clockwise)
Preceding gene: 126173329
Following gene: 126173335
Centisome position: 24.45
GC content: 47.73
Gene sequence:
>1299_bases ATGACACTCGATAAAAGCCAGCAAAAAAGCAGCTTTCTCCCCATGGCCATAGTGGCCGCTCTCTTTTTCATCCTCGGATT CGCCACTTGGTTGAATGGTTCTTTGATGCCGTATTTGAAACAAATATTGCAACTTAATCCCTTTCAAGCGTCGTTGATCC TGTTTTCTTTTTATATCGCAGTGACCTTTACTGCCTTGCCATCCGCCTGGCTTATTCGCAAAGTCGGTTATAAGAATGGC ATGGCGATCGGCATGGGCGTGATGATGCTGGCGGGTTTACTGTTTATCCCCGCCGCGGAAACCCAAATATTTGCCTTGTT CCTATTGGCCCAATTAGTGATGGGTACAGGCCAAACCTTATTACAAACTGCGGTTAACCCTTATGTGGTGCGTTTAGGCC CTGAAGAATCCGCCGCTGCCCGAGTGAGCGTGATGGGCATTTTGAACAAAGGTGCGGGTGTGATTGCGCCTGTGGTGTTC TCTGCACTGATTTTAGACAGCTTTAAAGACCGTATTGGTACTGAGCTGACTCAAATTCAAATTGATGAAATGGCCGATGG TTTAGTATTACCGTATTTAGGCATGGCGATTTTTATCGGCATTTTGGCGTTAGCGGTGAAGAAGTCGCCATTACCAGAAT TATCCAATGAAGATGAAGCTGTTGAAAATACCGATAAAGGCCAACTTAAAGCGGCGCTGTCTCACCCTAACTTAGCCTTT GGCGTGTTGGCACTGTTTGTTTATGTGGCGGTGGAAGTGATTGCCGGTGACACTATAGGCACTTTTGCGTTATCACTCGG GGTTGAGCATTACGGGGTGATGACCTCCTATACCATGGTGTGTATGGTGCTAGGTTACACGCTTGGTATCCTGTTAATTC CTCGCTTTATTTCACAGCCTAAGGCTTTAATGGTGTCGGCTATTCTGGGTTTGTTACTGACATGCGGTATTTTGTTCGGC GACAATAACTCCTACGCTATCGCCAATGTTGTGTTAGTGCCTTTTGGTGGCGTTGCGCTGCCTGACACCCTGTTGATGAT TGCCTTCCTTGGTTTAGCCAATGCGATCGTTTGGCCTGCAGTATGGCCGCTAGCCTTGTCTGGTATGGGCAAATTGACCA GTACAGGTTCAGCGCTTCTCATCATGGGGATTGCTGGTGGCGCCTTTGGTCCAGTGTCTTGGGGCTTAATGAGCTCGGCG ACTGATATGGGCATGCAGGGTGGTTATATTGTGATGTTGCCCTGTTATCTGTTCATCCTGTTCTACGCGGTGAAAGGCCA TAAGATGCGTAGTTGGTAA
Upstream 100 bases:
>100_bases TGCGGACGAGTCGCGATACGGATATTCGGGAACTTAGGCATTAATTTAAACCCCGTTATCACCTCAATAATTAATTACTA TAAGAAGCAGGTTTATGGAA
Downstream 100 bases:
>100_bases ACAAGTCAGCTTGAATAGCTAAAAAGAAGCCCTCGATGATGAGGGCTTTTTTGTGTCTTAGTTTATCTAAGCGGTTCTTC CGAACTTTATACTAAGGCCA
Product: glucose/galactose transporter
Products: Proton [Cytoplasm]; L-fucose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 431
Protein sequence:
>432_residues MTLDKSQQKSSFLPMAIVAALFFILGFATWLNGSLMPYLKQILQLNPFQASLILFSFYIAVTFTALPSAWLIRKVGYKNG MAIGMGVMMLAGLLFIPAAETQIFALFLLAQLVMGTGQTLLQTAVNPYVVRLGPEESAAARVSVMGILNKGAGVIAPVVF SALILDSFKDRIGTELTQIQIDEMADGLVLPYLGMAIFIGILALAVKKSPLPELSNEDEAVENTDKGQLKAALSHPNLAF GVLALFVYVAVEVIAGDTIGTFALSLGVEHYGVMTSYTMVCMVLGYTLGILLIPRFISQPKALMVSAILGLLLTCGILFG DNNSYAIANVVLVPFGGVALPDTLLMIAFLGLANAIVWPAVWPLALSGMGKLTSTGSALLIMGIAGGAFGPVSWGLMSSA TDMGMQGGYIVMLPCYLFILFYAVKGHKMRSW
Sequences:
>Translated_432_residues MTLDKSQQKSSFLPMAIVAALFFILGFATWLNGSLMPYLKQILQLNPFQASLILFSFYIAVTFTALPSAWLIRKVGYKNG MAIGMGVMMLAGLLFIPAAETQIFALFLLAQLVMGTGQTLLQTAVNPYVVRLGPEESAAARVSVMGILNKGAGVIAPVVF SALILDSFKDRIGTELTQIQIDEMADGLVLPYLGMAIFIGILALAVKKSPLPELSNEDEAVENTDKGQLKAALSHPNLAF GVLALFVYVAVEVIAGDTIGTFALSLGVEHYGVMTSYTMVCMVLGYTLGILLIPRFISQPKALMVSAILGLLLTCGILFG DNNSYAIANVVLVPFGGVALPDTLLMIAFLGLANAIVWPAVWPLALSGMGKLTSTGSALLIMGIAGGAFGPVSWGLMSSA TDMGMQGGYIVMLPCYLFILFYAVKGHKMRSW >Mature_431_residues TLDKSQQKSSFLPMAIVAALFFILGFATWLNGSLMPYLKQILQLNPFQASLILFSFYIAVTFTALPSAWLIRKVGYKNGM AIGMGVMMLAGLLFIPAAETQIFALFLLAQLVMGTGQTLLQTAVNPYVVRLGPEESAAARVSVMGILNKGAGVIAPVVFS ALILDSFKDRIGTELTQIQIDEMADGLVLPYLGMAIFIGILALAVKKSPLPELSNEDEAVENTDKGQLKAALSHPNLAFG VLALFVYVAVEVIAGDTIGTFALSLGVEHYGVMTSYTMVCMVLGYTLGILLIPRFISQPKALMVSAILGLLLTCGILFGD NNSYAIANVVLVPFGGVALPDTLLMIAFLGLANAIVWPAVWPLALSGMGKLTSTGSALLIMGIAGGAFGPVSWGLMSSAT DMGMQGGYIVMLPCYLFILFYAVKGHKMRSW
Specific function: Intake of glucose and galactose (Potential) [H]
COG id: COG0738
COG function: function code G; Fucose permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. FHS transporter (TC 2.A.1.7) family [H]
Homologues:
Organism=Escherichia coli, GI1789166, Length=416, Percent_Identity=28.6057692307692, Blast_Score=139, Evalue=5e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005964 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45991; Mature: 45860
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLDKSQQKSSFLPMAIVAALFFILGFATWLNGSLMPYLKQILQLNPFQASLILFSFYIA CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHH VTFTALPSAWLIRKVGYKNGMAIGMGVMMLAGLLFIPAAETQIFALFLLAQLVMGTGQTL HHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHH LQTAVNPYVVRLGPEESAAARVSVMGILNKGAGVIAPVVFSALILDSFKDRIGTELTQIQ HHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHEE IDEMADGLVLPYLGMAIFIGILALAVKKSPLPELSNEDEAVENTDKGQLKAALSHPNLAF HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHCCCCHHH GVLALFVYVAVEVIAGDTIGTFALSLGVEHYGVMTSYTMVCMVLGYTLGILLIPRFISQP HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH KALMVSAILGLLLTCGILFGDNNSYAIANVVLVPFGGVALPDTLLMIAFLGLANAIVWPA HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH VWPLALSGMGKLTSTGSALLIMGIAGGAFGPVSWGLMSSATDMGMQGGYIVMLPCYLFIL HHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHH FYAVKGHKMRSW HHHHCCCCCCCC >Mature Secondary Structure TLDKSQQKSSFLPMAIVAALFFILGFATWLNGSLMPYLKQILQLNPFQASLILFSFYIA CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHH VTFTALPSAWLIRKVGYKNGMAIGMGVMMLAGLLFIPAAETQIFALFLLAQLVMGTGQTL HHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHH LQTAVNPYVVRLGPEESAAARVSVMGILNKGAGVIAPVVFSALILDSFKDRIGTELTQIQ HHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHEE IDEMADGLVLPYLGMAIFIGILALAVKKSPLPELSNEDEAVENTDKGQLKAALSHPNLAF HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHCCCCHHH GVLALFVYVAVEVIAGDTIGTFALSLGVEHYGVMTSYTMVCMVLGYTLGILLIPRFISQP HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH KALMVSAILGLLLTCGILFGDNNSYAIANVVLVPFGGVALPDTLLMIAFLGLANAIVWPA HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH VWPLALSGMGKLTSTGSALLIMGIAGGAFGPVSWGLMSSATDMGMQGGYIVMLPCYLFIL HHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHH FYAVKGHKMRSW HHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-fucose [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-fucose [Periplasm] = Proton [Cytoplasm] + L-fucose [Cytoplasm] [C]
General reaction: Permease [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9168605 [H]