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The map label for this gene is padR [H]

Identifier: 125624965

GI number: 125624965

Start: 2164419

End: 2164958

Strand: Direct

Name: padR [H]

Synonym: llmg_2198

Alternate gene names: 125624965

Gene position: 2164419-2164958 (Clockwise)

Preceding gene: 125624964

Following gene: 125624966

Centisome position: 85.57

GC content: 34.26

Gene sequence:

>540_bases
ATGAGCCATAGAGATAAATTATCTTATATTATATTGGGACTTTTAAAGACAGAACCCTTAAGCGGTTACGACCTTAAAAA
AAAGTTTGAAAGTGAAGTGGGGGAATTTTGGCAAGCCAATACAGGGCAAATTTATCCTTCATTGAGAGTACTATTAAATG
ATCAGGCTGTAACTTTTGACGTCCATATCGTAGGTGAAAAGTTAGAGAAAAAGACTTATCAAATTACTCCAAAGGGAATC
CAACTTTTCAACGAGTGGTTGAAACATCCCGTTGATCGTTACCCAATCCAAAAGGACGAGTTTATGCTCCGTCTTTATTT
CCTTGATGATAAAAATGAAGAAAACCTCCTTAAATTAATCGAGGAAGAAAGCATCGTCCATCAGAAAAAATTGGACTATC
TCACTAGACGCCAAAAAAATCTTTTTGGTGAGTCTGAGGAAAATAAAAAGAGCGGTCATTATCTTGTTTTAGATTTTGCT
ATAAAAAGAGAAACCTTCAAAAAAGAATGGTTAGACTCATTGCTTAAAGATTTGAAATAA

Upstream 100 bases:

>100_bases
TAATGGATTGGAACGTTTTTTAAAAATGAAGTTTAAATTCTACGTCAAAAATTTACAATTTACCATTTTTTGTGTATCAT
GGAAATAAAGGAGAAAAAAT

Downstream 100 bases:

>100_bases
AAAAAAACACTAATATTTTCAAAATATTAGTGTTTTTTATTTCTCGTAAATAAATCTTTTTACGAACCTTTTTATTTTAA
GTTAGGGAAAAAAATTGTTA

Product: putative transcriptional repressor of padC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MSHRDKLSYIILGLLKTEPLSGYDLKKKFESEVGEFWQANTGQIYPSLRVLLNDQAVTFDVHIVGEKLEKKTYQITPKGI
QLFNEWLKHPVDRYPIQKDEFMLRLYFLDDKNEENLLKLIEEESIVHQKKLDYLTRRQKNLFGESEENKKSGHYLVLDFA
IKRETFKKEWLDSLLKDLK

Sequences:

>Translated_179_residues
MSHRDKLSYIILGLLKTEPLSGYDLKKKFESEVGEFWQANTGQIYPSLRVLLNDQAVTFDVHIVGEKLEKKTYQITPKGI
QLFNEWLKHPVDRYPIQKDEFMLRLYFLDDKNEENLLKLIEEESIVHQKKLDYLTRRQKNLFGESEENKKSGHYLVLDFA
IKRETFKKEWLDSLLKDLK
>Mature_178_residues
SHRDKLSYIILGLLKTEPLSGYDLKKKFESEVGEFWQANTGQIYPSLRVLLNDQAVTFDVHIVGEKLEKKTYQITPKGIQ
LFNEWLKHPVDRYPIQKDEFMLRLYFLDDKNEENLLKLIEEESIVHQKKLDYLTRRQKNLFGESEENKKSGHYLVLDFAI
KRETFKKEWLDSLLKDLK

Specific function: Negative transcriptional regulator of padC phenolic acid decarboxylase [H]

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018309
- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR; PF10400 Vir_act_alpha_C [H]

EC number: NA

Molecular weight: Translated: 21352; Mature: 21221

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHRDKLSYIILGLLKTEPLSGYDLKKKFESEVGEFWQANTGQIYPSLRVLLNDQAVTFD
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHEEEECCCEEEEE
VHIVGEKLEKKTYQITPKGIQLFNEWLKHPVDRYPIQKDEFMLRLYFLDDKNEENLLKLI
EEEECHHHHCHHEEECHHHHHHHHHHHHCCHHHCCCCCCCEEEEEEEECCCCHHHHHHHH
EEESIVHQKKLDYLTRRQKNLFGESEENKKSGHYLVLDFAIKRETFKKEWLDSLLKDLK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SHRDKLSYIILGLLKTEPLSGYDLKKKFESEVGEFWQANTGQIYPSLRVLLNDQAVTFD
CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHEEEECCCEEEEE
VHIVGEKLEKKTYQITPKGIQLFNEWLKHPVDRYPIQKDEFMLRLYFLDDKNEENLLKLI
EEEECHHHHCHHEEECHHHHHHHHHHHHCCHHHCCCCCCCEEEEEEEECCCCHHHHHHHH
EEESIVHQKKLDYLTRRQKNLFGESEENKKSGHYLVLDFAIKRETFKKEWLDSLLKDLK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]