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The map label for this gene is chiC [H]

Identifier: 125624966

GI number: 125624966

Start: 2165127

End: 2166605

Strand: Direct

Name: chiC [H]

Synonym: llmg_2199

Alternate gene names: 125624966

Gene position: 2165127-2166605 (Clockwise)

Preceding gene: 125624965

Following gene: 125624967

Centisome position: 85.6

GC content: 35.43

Gene sequence:

>1479_bases
ATGATTTCAGTGAAAAAACGAAAAAACATTAAAGTTTTTTTGATAACAGCGTCTATAGGAATTGTTGCGTTAGGAGGGCA
GCGAGTCTTAGCAGATGCAGCGAGTGAAATAGTCAATCCAAAAGATAAAGTACTTGTAGGTTATTGGCACAATTGGAAAT
CCACAGGAAAAGATGGTTATAAAGGAGGTAGTTCTGCTGACTTCAATCTTTCAAATACACAAGAAGGATATAATGTAATT
AATGTTTCCTTTATGAAGACACCTGAAGGGCAAACACTTCCCACATTTAAGCCTTACAACAAAACTGATGCTGAATTCAG
AGCCGAAGTTTCAAAATTAAATGCTGAAGGTAAGAGCGTCTTAATCGCTTTAGGAGGAGCTGATGCTCATATTGAATTAA
AGAAAAGTCAAGAAACTGATTTTGTTAATGAAATCATTCGTCTTGTAGATACTTACGGCTTTGATGGATTAGATATTGAT
TTAGAACAGGCTGCAATTGAAGCAGCAGATAATCAAACTGTTATCCCCTCTGCTTTAAAAACAGTTAAAGACCATTATCG
AAAAGATGGTAAAAACTTTATGATTACGATGGCTCCCGAATTTCCTTACTTAACAAGTTCAGGAAAATATGCTCCATATA
TCAACAATTTAGATTCATACTATGATTTCATCAATCCTCAATACTATAATCAAGGAGGGGATGGTTTTTGGGATAGTGAT
TTAAATATGTGGATTTCTCAATCAAATGACGAAAAAAAGGAAGACTTTCTGTATGGTTTAACTAAACGTCTCGTAACAGG
AACGGATGGGTTTATTAAAATTCCAGCTAGTAAATTCGTCATTGGCCTCCCATCTAATAATGACGCTGCCGCAACAGGTT
ATGTGAAAGACCCTAATGCCGTTAAAAATGCTTTGAATCGTTTAAAAGCTTCTGGTAATGAAATAAAAGGTTTGATGACT
TGGTCGGTAAATTGGGACGCTGGAAGCAATTCAAATGGTGAAAAATATAATAATACTTTTGTAAATACTTACGCCCCCAT
GCTCTTTAACAATCAACCGATTGAAGATACTGAAAAGCCAACTTTACCCACAATTTCCATTAATAATGTGACTGCTTCAA
CTGCCACGATTCAAGGAAAATCTACAGATAATGTTCGCATTGATTACTATGAAATTAAGATTGGTACCCAATCTTTTAAA
AGCACTTCTGGCTTACAAAACGTGACTGGACTATCCCCAAAAACTGAATACAATGTCGAAGTTGTAGCAGTTGACCCTTC
AGGTAATCGTTCTGATACTGCAAAGGCCACATTTATAACTCATGATACATCAGAGGAAAATAATATTTGGCAAAAAGATA
AAATTTATGTTCAAGGGGATCGTGTTACTTTTAATGGAGTAGATTATGAAGCAAAATGGTGGAATACTGGTCAACAGCCT
GATCAATCAGGAGATTTTGGTCCATGGAAAAAACTCTAA

Upstream 100 bases:

>100_bases
TTTTTATTTTAAGTTAGGGAAAAAAATTGTTAGAATGAAGTTAGCGCTTACAGAACAAGGTTCCGGAATCTTTAAAATCA
CTAGAATTTAGGAGATATTT

Downstream 100 bases:

>100_bases
AATAGGAAAGGATAAAATTTATGAAAAAACTACTTACTGGTTTATTAGTTACTGCTGGTCTACTCAGCTTCTCACTTTTC
ATTAAAACAGATTCTGTTTC

Product: acidic endochitinase precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 492; Mature: 492

Protein sequence:

>492_residues
MISVKKRKNIKVFLITASIGIVALGGQRVLADAASEIVNPKDKVLVGYWHNWKSTGKDGYKGGSSADFNLSNTQEGYNVI
NVSFMKTPEGQTLPTFKPYNKTDAEFRAEVSKLNAEGKSVLIALGGADAHIELKKSQETDFVNEIIRLVDTYGFDGLDID
LEQAAIEAADNQTVIPSALKTVKDHYRKDGKNFMITMAPEFPYLTSSGKYAPYINNLDSYYDFINPQYYNQGGDGFWDSD
LNMWISQSNDEKKEDFLYGLTKRLVTGTDGFIKIPASKFVIGLPSNNDAAATGYVKDPNAVKNALNRLKASGNEIKGLMT
WSVNWDAGSNSNGEKYNNTFVNTYAPMLFNNQPIEDTEKPTLPTISINNVTASTATIQGKSTDNVRIDYYEIKIGTQSFK
STSGLQNVTGLSPKTEYNVEVVAVDPSGNRSDTAKATFITHDTSEENNIWQKDKIYVQGDRVTFNGVDYEAKWWNTGQQP
DQSGDFGPWKKL

Sequences:

>Translated_492_residues
MISVKKRKNIKVFLITASIGIVALGGQRVLADAASEIVNPKDKVLVGYWHNWKSTGKDGYKGGSSADFNLSNTQEGYNVI
NVSFMKTPEGQTLPTFKPYNKTDAEFRAEVSKLNAEGKSVLIALGGADAHIELKKSQETDFVNEIIRLVDTYGFDGLDID
LEQAAIEAADNQTVIPSALKTVKDHYRKDGKNFMITMAPEFPYLTSSGKYAPYINNLDSYYDFINPQYYNQGGDGFWDSD
LNMWISQSNDEKKEDFLYGLTKRLVTGTDGFIKIPASKFVIGLPSNNDAAATGYVKDPNAVKNALNRLKASGNEIKGLMT
WSVNWDAGSNSNGEKYNNTFVNTYAPMLFNNQPIEDTEKPTLPTISINNVTASTATIQGKSTDNVRIDYYEIKIGTQSFK
STSGLQNVTGLSPKTEYNVEVVAVDPSGNRSDTAKATFITHDTSEENNIWQKDKIYVQGDRVTFNGVDYEAKWWNTGQQP
DQSGDFGPWKKL
>Mature_492_residues
MISVKKRKNIKVFLITASIGIVALGGQRVLADAASEIVNPKDKVLVGYWHNWKSTGKDGYKGGSSADFNLSNTQEGYNVI
NVSFMKTPEGQTLPTFKPYNKTDAEFRAEVSKLNAEGKSVLIALGGADAHIELKKSQETDFVNEIIRLVDTYGFDGLDID
LEQAAIEAADNQTVIPSALKTVKDHYRKDGKNFMITMAPEFPYLTSSGKYAPYINNLDSYYDFINPQYYNQGGDGFWDSD
LNMWISQSNDEKKEDFLYGLTKRLVTGTDGFIKIPASKFVIGLPSNNDAAATGYVKDPNAVKNALNRLKASGNEIKGLMT
WSVNWDAGSNSNGEKYNNTFVNTYAPMLFNNQPIEDTEKPTLPTISINNVTASTATIQGKSTDNVRIDYYEIKIGTQSFK
STSGLQNVTGLSPKTEYNVEVVAVDPSGNRSDTAKATFITHDTSEENNIWQKDKIYVQGDRVTFNGVDYEAKWWNTGQQP
DQSGDFGPWKKL

Specific function: Unknown

COG id: COG3469

COG function: function code G; Chitinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 fibronectin type-III domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003610
- InterPro:   IPR008957
- InterPro:   IPR003961
- InterPro:   IPR001223
- InterPro:   IPR001579
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR015520 [H]

Pfam domain/function: PF02839 CBM_5_12; PF00041 fn3; PF00704 Glyco_hydro_18 [H]

EC number: =3.2.1.14 [H]

Molecular weight: Translated: 54515; Mature: 54515

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS50853 FN3 ; PS01095 CHITINASE_18

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISVKKRKNIKVFLITASIGIVALGGQRVLADAASEIVNPKDKVLVGYWHNWKSTGKDGY
CCCCCCCCCCEEEEEEECCEEEEECCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC
KGGSSADFNLSNTQEGYNVINVSFMKTPEGQTLPTFKPYNKTDAEFRAEVSKLNAEGKSV
CCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEE
LIALGGADAHIELKKSQETDFVNEIIRLVDTYGFDGLDIDLEQAAIEAADNQTVIPSALK
EEEECCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHCCCCCEECHHHHH
TVKDHYRKDGKNFMITMAPEFPYLTSSGKYAPYINNLDSYYDFINPQYYNQGGDGFWDSD
HHHHHHHCCCCEEEEEECCCCCEECCCCCCCCCCCCCHHHHHHCCCEEECCCCCCEECCC
LNMWISQSNDEKKEDFLYGLTKRLVTGTDGFIKIPASKFVIGLPSNNDAAATGYVKDPNA
CEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCCCCCEEECEECCCHH
VKNALNRLKASGNEIKGLMTWSVNWDAGSNSNGEKYNNTFVNTYAPMLFNNQPIEDTEKP
HHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCEECCCCCCCCCCC
TLPTISINNVTASTATIQGKSTDNVRIDYYEIKIGTQSFKSTSGLQNVTGLSPKTEYNVE
CCCEEEECCEEECEEEEECCCCCCEEEEEEEEEECCHHHCCCCCCCHHCCCCCCCCCCEE
VVAVDPSGNRSDTAKATFITHDTSEENNIWQKDKIYVQGDRVTFNGVDYEAKWWNTGQQP
EEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCEEEECCCCEEEECCCCCCCC
DQSGDFGPWKKL
CCCCCCCCCCCC
>Mature Secondary Structure
MISVKKRKNIKVFLITASIGIVALGGQRVLADAASEIVNPKDKVLVGYWHNWKSTGKDGY
CCCCCCCCCCEEEEEEECCEEEEECCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC
KGGSSADFNLSNTQEGYNVINVSFMKTPEGQTLPTFKPYNKTDAEFRAEVSKLNAEGKSV
CCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEE
LIALGGADAHIELKKSQETDFVNEIIRLVDTYGFDGLDIDLEQAAIEAADNQTVIPSALK
EEEECCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHCCCCCEECHHHHH
TVKDHYRKDGKNFMITMAPEFPYLTSSGKYAPYINNLDSYYDFINPQYYNQGGDGFWDSD
HHHHHHHCCCCEEEEEECCCCCEECCCCCCCCCCCCCHHHHHHCCCEEECCCCCCEECCC
LNMWISQSNDEKKEDFLYGLTKRLVTGTDGFIKIPASKFVIGLPSNNDAAATGYVKDPNA
CEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCCCCCEEECEECCCHH
VKNALNRLKASGNEIKGLMTWSVNWDAGSNSNGEKYNNTFVNTYAPMLFNNQPIEDTEKP
HHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCEECCCCCCCCCCC
TLPTISINNVTASTATIQGKSTDNVRIDYYEIKIGTQSFKSTSGLQNVTGLSPKTEYNVE
CCCEEEECCEEECEEEEECCCCCCEEEEEEEEEECCHHHCCCCCCCHHCCCCCCCCCCEE
VVAVDPSGNRSDTAKATFITHDTSEENNIWQKDKIYVQGDRVTFNGVDYEAKWWNTGQQP
EEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCEEEECCCCEEEECCCCCCCC
DQSGDFGPWKKL
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1729234 [H]