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The map label for this gene is padC [H]

Identifier: 125624964

GI number: 125624964

Start: 2163648

End: 2164103

Strand: Direct

Name: padC [H]

Synonym: llmg_2197

Alternate gene names: 125624964

Gene position: 2163648-2164103 (Clockwise)

Preceding gene: 125624944

Following gene: 125624965

Centisome position: 85.54

GC content: 33.55

Gene sequence:

>456_bases
ATGAAAAAATTTACTAACTTAGATGATTTTATCGGAACACATTTTATCTACACTTATGACAATGGCTGGGAATATGAACT
TTATGTCAAAAATGAGAACACTATTGATTATCGTATTCACGGTGGCATGGTTGCAGGTCGTTGGGTTAAAAATCAAGAAG
TTTCATTAGTGATGTTAACAGAAGGAATCTATAAAATTGCTTGGACAGAGCCTACCGGAACTGACGTTGCTTTAGATTTC
TTGCCAAATGAAGAAAAAATGCACGGAATGATTTTCTTTCCAAAATGGGTGGAAGAACATCCAGAAATTACTGTTTGTTT
CCAAAATGATTTTATTGAATTGATGCACGAATCACGTGAAAAATTTGAAACTTATCCTAAGTATTTGGTTCCAGAGTTTG
CTAAAATCACTTATGTCGGAAAAGCTGGAAAAAATAATGATGATGTGGTTGCTTAA

Upstream 100 bases:

>100_bases
AATGTATTTTTTATGCTTGACAAATTTCTGCTTCTTTTTTATAATAAATATATATTTAAAACATGTTTTTAAAACACGTT
TATAGAAAAGAGAATAATAA

Downstream 100 bases:

>100_bases
GCACCCTACCAAGGTATGACAAATGATATTCGCAACGGAAAATATTATAATACAAGCTATGAAATGATTAATAAATGATT
TTATTCCTCAGAACTCAACT

Product: PadC protein

Products: NA

Alternate protein names: PAD [H]

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MKKFTNLDDFIGTHFIYTYDNGWEYELYVKNENTIDYRIHGGMVAGRWVKNQEVSLVMLTEGIYKIAWTEPTGTDVALDF
LPNEEKMHGMIFFPKWVEEHPEITVCFQNDFIELMHESREKFETYPKYLVPEFAKITYVGKAGKNNDDVVA

Sequences:

>Translated_151_residues
MKKFTNLDDFIGTHFIYTYDNGWEYELYVKNENTIDYRIHGGMVAGRWVKNQEVSLVMLTEGIYKIAWTEPTGTDVALDF
LPNEEKMHGMIFFPKWVEEHPEITVCFQNDFIELMHESREKFETYPKYLVPEFAKITYVGKAGKNNDDVVA
>Mature_151_residues
MKKFTNLDDFIGTHFIYTYDNGWEYELYVKNENTIDYRIHGGMVAGRWVKNQEVSLVMLTEGIYKIAWTEPTGTDVALDF
LPNEEKMHGMIFFPKWVEEHPEITVCFQNDFIELMHESREKFETYPKYLVPEFAKITYVGKAGKNNDDVVA

Specific function: Involved in the decarboxylation and detoxification of phenolic derivatives. It is able to catalyze the decarboxylation of ferulic, p-coumaric and caffeic acids [H]

COG id: COG3479

COG function: function code Q; Phenolic acid decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the padC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR008729
- ProDom:   PD022010 [H]

Pfam domain/function: PF05870 PA_decarbox [H]

EC number: NA

Molecular weight: Translated: 17763; Mature: 17763

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFTNLDDFIGTHFIYTYDNGWEYELYVKNENTIDYRIHGGMVAGRWVKNQEVSLVMLT
CCCCCCCCHHCCCEEEEEECCCEEEEEEEECCCEEEEEEECCEEEEEEECCCCEEEEEEE
EGIYKIAWTEPTGTDVALDFLPNEEKMHGMIFFPKWVEEHPEITVCFQNDFIELMHESRE
CCEEEEEEECCCCCEEEEEECCCCCCEEEEEEECHHHCCCCCEEEEECCCHHHHHHHHHH
KFETYPKYLVPEFAKITYVGKAGKNNDDVVA
HHHCCCCCCCCCCEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKKFTNLDDFIGTHFIYTYDNGWEYELYVKNENTIDYRIHGGMVAGRWVKNQEVSLVMLT
CCCCCCCCHHCCCEEEEEECCCEEEEEEEECCCEEEEEEECCEEEEEEECCCCEEEEEEE
EGIYKIAWTEPTGTDVALDFLPNEEKMHGMIFFPKWVEEHPEITVCFQNDFIELMHESRE
CCEEEEEEECCCCCEEEEEECCCCCCEEEEEEECHHHCCCCCEEEEECCCHHHHHHHHHH
KFETYPKYLVPEFAKITYVGKAGKNNDDVVA
HHHCCCCCCCCCCEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9546183; 9384377 [H]