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The map label for this gene is recR [H]

Identifier: 125623229

GI number: 125623229

Start: 346899

End: 347495

Strand: Direct

Name: recR [H]

Synonym: llmg_0359

Alternate gene names: 125623229

Gene position: 346899-347495 (Clockwise)

Preceding gene: 125623228

Following gene: 125623230

Centisome position: 13.71

GC content: 40.03

Gene sequence:

>597_bases
ATGTATTATCCAGAACCTATTGCTCGCCTGATTGAGTCATTTTCAAAATTACCCGGAATTGGGCAGAAAACGGCGACACG
GCTAGCTTTTTATACGATTGGCATGGAAGATCAAGATGTCAATGAATTTGCGAAAAATCTCTTGTCAGCAAAACGAGATT
TACGCTTTTGCTCTATTTGTGGGAATTTAACAGAAAGTGATCCTTGTGCTATTTGTACTGATCCCACACGTGATAGAACA
ACGATATTGGTTGTCGAAGAATCTAAAGATGTTCTTGCCATGGAAAAAATCCGTGAATATCGCGGACTCTATCATGTCTT
ACATGGAACAATTAGTCCAATGAACGGGATCTCTCCTGATGAAATTAATGTTAAATCTTTGATTACAAGGTTAATGGACT
CAGAAGTTAAAGAAGTGATTATTGCGACCAATGCAACTTCGGATGGTGAAGCAACCGCTATGTATCTGGCTCGAATGATT
AAACCTGCGGGAATTAAAGTGACACGACTGGCTCGTGGATTAGCTGTAGGGTCTGATATAGAATACGCTGATGAGGTTAC
CTTATCAAAAGCCGTGGAGAATCGGTTGGAAATTTGA

Upstream 100 bases:

>100_bases
TTCTTTTAAAAATCTTGTCGCATTTCCTTTTCATTTTAAGCCTTTTATAGTAAAATTAATAAATTGAATAAAATATTTAC
AAGTGAAGAATTGGTGAAAT

Downstream 100 bases:

>100_bases
TTTTTTCTGTGGTAAAATAAAAAAGACAATTATTGACGTTTTGTATTATAAAGCAATCTTAAAAATGGTCAGTAAAAAAG
AAGCGACTGACAAGGCAGTC

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MYYPEPIARLIESFSKLPGIGQKTATRLAFYTIGMEDQDVNEFAKNLLSAKRDLRFCSICGNLTESDPCAICTDPTRDRT
TILVVEESKDVLAMEKIREYRGLYHVLHGTISPMNGISPDEINVKSLITRLMDSEVKEVIIATNATSDGEATAMYLARMI
KPAGIKVTRLARGLAVGSDIEYADEVTLSKAVENRLEI

Sequences:

>Translated_198_residues
MYYPEPIARLIESFSKLPGIGQKTATRLAFYTIGMEDQDVNEFAKNLLSAKRDLRFCSICGNLTESDPCAICTDPTRDRT
TILVVEESKDVLAMEKIREYRGLYHVLHGTISPMNGISPDEINVKSLITRLMDSEVKEVIIATNATSDGEATAMYLARMI
KPAGIKVTRLARGLAVGSDIEYADEVTLSKAVENRLEI
>Mature_198_residues
MYYPEPIARLIESFSKLPGIGQKTATRLAFYTIGMEDQDVNEFAKNLLSAKRDLRFCSICGNLTESDPCAICTDPTRDRT
TILVVEESKDVLAMEKIREYRGLYHVLHGTISPMNGISPDEINVKSLITRLMDSEVKEVIIATNATSDGEATAMYLARMI
KPAGIKVTRLARGLAVGSDIEYADEVTLSKAVENRLEI

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=193, Percent_Identity=36.7875647668394, Blast_Score=140, Evalue=7e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF02132 RecR; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 21951; Mature: 21951

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYPEPIARLIESFSKLPGIGQKTATRLAFYTIGMEDQDVNEFAKNLLSAKRDLRFCSIC
CCCCHHHHHHHHHHHHCCCCCHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
GNLTESDPCAICTDPTRDRTTILVVEESKDVLAMEKIREYRGLYHVLHGTISPMNGISPD
CCCCCCCCCEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
EINVKSLITRLMDSEVKEVIIATNATSDGEATAMYLARMIKPAGIKVTRLARGLAVGSDI
CCCHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
EYADEVTLSKAVENRLEI
CHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYYPEPIARLIESFSKLPGIGQKTATRLAFYTIGMEDQDVNEFAKNLLSAKRDLRFCSIC
CCCCHHHHHHHHHHHHCCCCCHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
GNLTESDPCAICTDPTRDRTTILVVEESKDVLAMEKIREYRGLYHVLHGTISPMNGISPD
CCCCCCCCCEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
EINVKSLITRLMDSEVKEVIIATNATSDGEATAMYLARMIKPAGIKVTRLARGLAVGSDI
CCCHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
EYADEVTLSKAVENRLEI
CHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]