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The map label for this gene is yciD [H]

Identifier: 125623170

GI number: 125623170

Start: 288431

End: 288874

Strand: Direct

Name: yciD [H]

Synonym: llmg_0298

Alternate gene names: 125623170

Gene position: 288431-288874 (Clockwise)

Preceding gene: 125623169

Following gene: 125623171

Centisome position: 11.4

GC content: 36.26

Gene sequence:

>444_bases
GTGCTTACAAATCAAGAATTGACGAAAAAGGTAAGAGAAATTTCTTTAAACTATTTTAAGCGTCCATTTGAACATGAAGC
AAAGTGGAATCAGCGTTTACGAACTACTGGTGGTCGCTTTTTTCCAAAAGATTTACATCTTGATTTTAACCCTAAAATGG
CCGAACTGGAGGACTTTGAAGGAGTAGTTCTACATGAATTAACTCATTACCACCTCTATCGCACAAAAAGGGGTTATAAG
CATCAAGATGCTGACTTTAAAAGATTACTTGCGCAAGTTGGTGGCCTTCGTTATGCACCAGCAGTAGAGGAGAGAAAAGT
AAAATATGATTATGTCTGTCAAAATTGCGGACAAAACTATCCCAGACAAAGAAAAATCGATACAAAAAAGTATCGTTGTG
GAAAATGTCGTGGTCAGTTGAAAATAAAAACAAGCAGAATTTAG

Upstream 100 bases:

>100_bases
GTTAGATGAAACTCTAATCCAAATTTACTGATAGAGAGAATTGATAAGAAGCGAAAAAAATACTGACAACCTTCTTAGAT
TGTTTTGCCAAGGAGAAGAT

Downstream 100 bases:

>100_bases
CAATTCTGTTTGTTTTTTATTAGTTATTAAGGGATTTATCCACATTTTCTTCACTTTTTCCCCAAATGCTGTGAATAAGT
ACCTTGAAATTGGGGATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MLTNQELTKKVREISLNYFKRPFEHEAKWNQRLRTTGGRFFPKDLHLDFNPKMAELEDFEGVVLHELTHYHLYRTKRGYK
HQDADFKRLLAQVGGLRYAPAVEERKVKYDYVCQNCGQNYPRQRKIDTKKYRCGKCRGQLKIKTSRI

Sequences:

>Translated_147_residues
MLTNQELTKKVREISLNYFKRPFEHEAKWNQRLRTTGGRFFPKDLHLDFNPKMAELEDFEGVVLHELTHYHLYRTKRGYK
HQDADFKRLLAQVGGLRYAPAVEERKVKYDYVCQNCGQNYPRQRKIDTKKYRCGKCRGQLKIKTSRI
>Mature_147_residues
MLTNQELTKKVREISLNYFKRPFEHEAKWNQRLRTTGGRFFPKDLHLDFNPKMAELEDFEGVVLHELTHYHLYRTKRGYK
HQDADFKRLLAQVGGLRYAPAVEERKVKYDYVCQNCGQNYPRQRKIDTKKYRCGKCRGQLKIKTSRI

Specific function: Unknown

COG id: COG3091

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sprT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006640 [H]

Pfam domain/function: PF10263 SprT-like [H]

EC number: NA

Molecular weight: Translated: 17669; Mature: 17669

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTNQELTKKVREISLNYFKRPFEHEAKWNQRLRTTGGRFFPKDLHLDFNPKMAELEDFE
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCC
GVVLHELTHYHLYRTKRGYKHQDADFKRLLAQVGGLRYAPAVEERKVKYDYVCQNCGQNY
CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCC
PRQRKIDTKKYRCGKCRGQLKIKTSRI
CCCCCCCCHHHHCCCCCCEEEEEECCC
>Mature Secondary Structure
MLTNQELTKKVREISLNYFKRPFEHEAKWNQRLRTTGGRFFPKDLHLDFNPKMAELEDFE
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCC
GVVLHELTHYHLYRTKRGYKHQDADFKRLLAQVGGLRYAPAVEERKVKYDYVCQNCGQNY
CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCC
PRQRKIDTKKYRCGKCRGQLKIKTSRI
CCCCCCCCHHHHCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]