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The map label for this gene is tex [H]

Identifier: 125623169

GI number: 125623169

Start: 286157

End: 288298

Strand: Direct

Name: tex [H]

Synonym: llmg_0297

Alternate gene names: 125623169

Gene position: 286157-288298 (Clockwise)

Preceding gene: 125623168

Following gene: 125623170

Centisome position: 11.31

GC content: 37.25

Gene sequence:

>2142_bases
GTGGAAAATGTTAAAAAAATTGCTGAATTATTGAATATCAAAAATTCACAAGTTGAAAAAGTATTAGAATTGACGGCTGA
GGGGAACACGGTTCCTTTTATTGCTCGTTATCGTAAGGAAGCAACAGGTTCACTTGACGAAGTTGAAATCAAAAAAATTA
TTGATGAAGATAATTTACTGACCAAACTTTCAGAACGTAAAACGGCTGTTTTGTCAAAAATTGAGGAGCTTGGCAAGTTA
ACTGACAGTTTGAGATCACAAATTTTATCGGCCGAAAAACTAACAGAAGTCGAAGATTTGTATTTGCCTTACAAAGAAAA
ACGGCGCACCAAAGCAACGATTGCTAAGGAAAATGGTCTTTTTCCATTGGCACAATTAATTGTAAAAAATTCAGCGAATC
TTGAAGAAGAAGCTGAAAAATTTGTCAATGAGAATTTTACAAGTCCTCAAAAAGCTTTAGAAGGTGCCGTGGATATCTTG
TCAGAAGCGATTTCTGAAGATGCGCGGTTGCGTTCATGGCTGACTGGTGAAATCAAAAACAATAGTTTACTGACAAGTAG
TTTGAAAAAAGATGCCGTTGATGAAAAGCAAGTTTTTCAAATGTATTATGAATTCTCAGAAAAAGTTTCAGAATTACCAA
ATTATCGTGTATTGGCTTTAAACCGTGGTGAAAAATTGGGGATTCTGTCAGTAAAATTTGAAAATAACGAAGACAAAATT
TTACGTTATTTTGCCGCCCGTTTTGCTGCTCAAAATAATTTAATGATGCAAGTGGCCATTAAAGATGCCGTCAAGAAAAA
ATTGATTCCGGCTATGGAACGAAGTATTCGAGGCGAGCTGACAGAAAAAGCTGAAGCATCTGCTATTGAAGTTTTTGGCG
AAAATTTGAAAAATCTTTTATTGGTTGCACCGCTTAAAGGCCGTGTAGTCATGGGATTTGACCCTGCTTACCGTACTGGA
GCAAAGCTTGCTATTGTTGATGAGACAGGTAAATTATTGATGACAACTGTCATTTATCCTGTCAAACCAGCAAATGCAGG
ACAAATTGCTCAAGCGAAAAAAAATTTAGCAAAATTTATTCGTGAATATGGTGTAAATATGATTGCCATTGGGAATGGAA
CTGCCAGCCGCGAATCTGAAAGTTTTGTTTCTGAAGTCCTCAAAGAAAATAATTTTTCTGATGTTTATTATGTGATTGTC
AGTGAATCTGGAGCCTCTGTTTATTCAGCAAGTGAATTGGCACGTGAAGAATTCCCAGAATTGACTGTTGAAAAGCGGTC
AGCAATTTCGATTGCACGCCGTTTGCAAGATCCATTGGCTGAACTTGTAAAAATTGAACCAAAAGCCATCGGTGTGGGTC
AATATCAACATGATGTTTCTGAGAAAAAATTGACAGAAAATCTAGATTTTGTTGTTGAAACAGTCGTTAACCAAGTTGGT
GTTAATGTCAATACAGCCAGTCCTAGTTTGCTTTCACACGTTGCGGGCCTTAATAAAAGTTTGGCACAGAATGTAGTAAA
ATATCGTGAAGAAAATGGCGCACTCAAAACAAGAGCGGAACTAAAAAAAGTCCCACGTTTGGGAGCTAAAGCATTTGAAC
AAGCGGCAGGTTTCTTAAGAATTCCAGAAGGTAAAAATTTCCTTGACAATACCGGTGTTCACCCAGAATCTTATAAAGTG
ACGGAACAACTTTTGGCTGAAATTGCTGCTGGACCTGCTGTCAGTAATGAAGAATTACTGACCAAACTTTCGTCAGTAAA
TATTCCTGAAATGGCTGAAAAACTTGGTCTTGGTCAGGAAACATTGACCGATATTATTAATGATTTGAAAAAACCTGGTC
GTGATTTACGTGATAGCTTTGATGCACCGATTCTTCGTCAAGATGTCTTGTCTGCTGGAGATTTACAAATTGGTCAGCAA
CTTGAAGGTGTGGTCCGTAATGTTGTTGATTTTGGTGCCTTTATTGATATCGGAATTAAAAATGACGGCTTGGCACACGT
TTCTGATTTGAGCAAATCATTTGTCAAAAATCCAAGTGATGTGGTCGCTGTTGGACAAATTGTAACGGTTTGGGTCAAAT
CTCTTGATTTACAAAGAGGAAAAATTAATTTGACCCTAGTGAATCCTCGCGAAGAAGATTAA

Upstream 100 bases:

>100_bases
CTATTTGGGAGCGATTTTTTCATCATTTTTTTGGTAAAATAGAGATAAGCGTTGTGATTAAGAATTGCTGACAAAAAAAC
TAGTTAAGGATTATTTCTAA

Downstream 100 bases:

>100_bases
TTCTGTCAGAAAATTTTTCTGATTTCAGTTCCGTTAGATGAAACTCTAATCCAAATTTACTGATAGAGAGAATTGATAAG
AAGCGAAAAAAATACTGACA

Product: transcription accessory protein TEX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 713; Mature: 713

Protein sequence:

>713_residues
MENVKKIAELLNIKNSQVEKVLELTAEGNTVPFIARYRKEATGSLDEVEIKKIIDEDNLLTKLSERKTAVLSKIEELGKL
TDSLRSQILSAEKLTEVEDLYLPYKEKRRTKATIAKENGLFPLAQLIVKNSANLEEEAEKFVNENFTSPQKALEGAVDIL
SEAISEDARLRSWLTGEIKNNSLLTSSLKKDAVDEKQVFQMYYEFSEKVSELPNYRVLALNRGEKLGILSVKFENNEDKI
LRYFAARFAAQNNLMMQVAIKDAVKKKLIPAMERSIRGELTEKAEASAIEVFGENLKNLLLVAPLKGRVVMGFDPAYRTG
AKLAIVDETGKLLMTTVIYPVKPANAGQIAQAKKNLAKFIREYGVNMIAIGNGTASRESESFVSEVLKENNFSDVYYVIV
SESGASVYSASELAREEFPELTVEKRSAISIARRLQDPLAELVKIEPKAIGVGQYQHDVSEKKLTENLDFVVETVVNQVG
VNVNTASPSLLSHVAGLNKSLAQNVVKYREENGALKTRAELKKVPRLGAKAFEQAAGFLRIPEGKNFLDNTGVHPESYKV
TEQLLAEIAAGPAVSNEELLTKLSSVNIPEMAEKLGLGQETLTDIINDLKKPGRDLRDSFDAPILRQDVLSAGDLQIGQQ
LEGVVRNVVDFGAFIDIGIKNDGLAHVSDLSKSFVKNPSDVVAVGQIVTVWVKSLDLQRGKINLTLVNPREED

Sequences:

>Translated_713_residues
MENVKKIAELLNIKNSQVEKVLELTAEGNTVPFIARYRKEATGSLDEVEIKKIIDEDNLLTKLSERKTAVLSKIEELGKL
TDSLRSQILSAEKLTEVEDLYLPYKEKRRTKATIAKENGLFPLAQLIVKNSANLEEEAEKFVNENFTSPQKALEGAVDIL
SEAISEDARLRSWLTGEIKNNSLLTSSLKKDAVDEKQVFQMYYEFSEKVSELPNYRVLALNRGEKLGILSVKFENNEDKI
LRYFAARFAAQNNLMMQVAIKDAVKKKLIPAMERSIRGELTEKAEASAIEVFGENLKNLLLVAPLKGRVVMGFDPAYRTG
AKLAIVDETGKLLMTTVIYPVKPANAGQIAQAKKNLAKFIREYGVNMIAIGNGTASRESESFVSEVLKENNFSDVYYVIV
SESGASVYSASELAREEFPELTVEKRSAISIARRLQDPLAELVKIEPKAIGVGQYQHDVSEKKLTENLDFVVETVVNQVG
VNVNTASPSLLSHVAGLNKSLAQNVVKYREENGALKTRAELKKVPRLGAKAFEQAAGFLRIPEGKNFLDNTGVHPESYKV
TEQLLAEIAAGPAVSNEELLTKLSSVNIPEMAEKLGLGQETLTDIINDLKKPGRDLRDSFDAPILRQDVLSAGDLQIGQQ
LEGVVRNVVDFGAFIDIGIKNDGLAHVSDLSKSFVKNPSDVVAVGQIVTVWVKSLDLQRGKINLTLVNPREED
>Mature_713_residues
MENVKKIAELLNIKNSQVEKVLELTAEGNTVPFIARYRKEATGSLDEVEIKKIIDEDNLLTKLSERKTAVLSKIEELGKL
TDSLRSQILSAEKLTEVEDLYLPYKEKRRTKATIAKENGLFPLAQLIVKNSANLEEEAEKFVNENFTSPQKALEGAVDIL
SEAISEDARLRSWLTGEIKNNSLLTSSLKKDAVDEKQVFQMYYEFSEKVSELPNYRVLALNRGEKLGILSVKFENNEDKI
LRYFAARFAAQNNLMMQVAIKDAVKKKLIPAMERSIRGELTEKAEASAIEVFGENLKNLLLVAPLKGRVVMGFDPAYRTG
AKLAIVDETGKLLMTTVIYPVKPANAGQIAQAKKNLAKFIREYGVNMIAIGNGTASRESESFVSEVLKENNFSDVYYVIV
SESGASVYSASELAREEFPELTVEKRSAISIARRLQDPLAELVKIEPKAIGVGQYQHDVSEKKLTENLDFVVETVVNQVG
VNVNTASPSLLSHVAGLNKSLAQNVVKYREENGALKTRAELKKVPRLGAKAFEQAAGFLRIPEGKNFLDNTGVHPESYKV
TEQLLAEIAAGPAVSNEELLTKLSSVNIPEMAEKLGLGQETLTDIINDLKKPGRDLRDSFDAPILRQDVLSAGDLQIGQQ
LEGVVRNVVDFGAFIDIGIKNDGLAHVSDLSKSFVKNPSDVVAVGQIVTVWVKSLDLQRGKINLTLVNPREED

Specific function: Unknown

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=782, Percent_Identity=34.1432225063939, Blast_Score=407, Evalue=1e-113,
Organism=Homo sapiens, GI27597090, Length=577, Percent_Identity=24.4367417677643, Blast_Score=100, Evalue=9e-21,
Organism=Escherichia coli, GI87082262, Length=721, Percent_Identity=45.2149791955617, Blast_Score=556, Evalue=1e-159,
Organism=Escherichia coli, GI1787140, Length=73, Percent_Identity=42.4657534246575, Blast_Score=67, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17511129, Length=716, Percent_Identity=32.9608938547486, Blast_Score=273, Evalue=3e-73,
Organism=Caenorhabditis elegans, GI17552892, Length=803, Percent_Identity=21.2951432129514, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI62484314, Length=757, Percent_Identity=33.8177014531044, Blast_Score=382, Evalue=1e-106,
Organism=Drosophila melanogaster, GI24640080, Length=586, Percent_Identity=22.8668941979522, Blast_Score=95, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 78804; Mature: 78804

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENVKKIAELLNIKNSQVEKVLELTAEGNTVPFIARYRKEATGSLDEVEIKKIIDEDNLL
CCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHH
TKLSERKTAVLSKIEELGKLTDSLRSQILSAEKLTEVEDLYLPYKEKRRTKATIAKENGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
FPLAQLIVKNSANLEEEAEKFVNENFTSPQKALEGAVDILSEAISEDARLRSWLTGEIKN
HHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NSLLTSSLKKDAVDEKQVFQMYYEFSEKVSELPNYRVLALNRGEKLGILSVKFENNEDKI
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEECCCHHHH
LRYFAARFAAQNNLMMQVAIKDAVKKKLIPAMERSIRGELTEKAEASAIEVFGENLKNLL
HHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEE
LVAPLKGRVVMGFDPAYRTGAKLAIVDETGKLLMTTVIYPVKPANAGQIAQAKKNLAKFI
EEECCCCCEEEECCHHHHCCCEEEEEECCCCEEEHHHEEECCCCCCCHHHHHHHHHHHHH
REYGVNMIAIGNGTASRESESFVSEVLKENNFSDVYYVIVSESGASVYSASELAREEFPE
HHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCC
LTVEKRSAISIARRLQDPLAELVKIEPKAIGVGQYQHDVSEKKLTENLDFVVETVVNQVG
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
VNVNTASPSLLSHVAGLNKSLAQNVVKYREENGALKTRAELKKVPRLGAKAFEQAAGFLR
CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHCCCCEE
IPEGKNFLDNTGVHPESYKVTEQLLAEIAAGPAVSNEELLTKLSSVNIPEMAEKLGLGQE
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHCCCHH
TLTDIINDLKKPGRDLRDSFDAPILRQDVLSAGDLQIGQQLEGVVRNVVDFGAFIDIGIK
HHHHHHHHHHCCCCHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEECC
NDGLAHVSDLSKSFVKNPSDVVAVGQIVTVWVKSLDLQRGKINLTLVNPREED
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC
>Mature Secondary Structure
MENVKKIAELLNIKNSQVEKVLELTAEGNTVPFIARYRKEATGSLDEVEIKKIIDEDNLL
CCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHH
TKLSERKTAVLSKIEELGKLTDSLRSQILSAEKLTEVEDLYLPYKEKRRTKATIAKENGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
FPLAQLIVKNSANLEEEAEKFVNENFTSPQKALEGAVDILSEAISEDARLRSWLTGEIKN
HHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NSLLTSSLKKDAVDEKQVFQMYYEFSEKVSELPNYRVLALNRGEKLGILSVKFENNEDKI
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEECCCHHHH
LRYFAARFAAQNNLMMQVAIKDAVKKKLIPAMERSIRGELTEKAEASAIEVFGENLKNLL
HHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEE
LVAPLKGRVVMGFDPAYRTGAKLAIVDETGKLLMTTVIYPVKPANAGQIAQAKKNLAKFI
EEECCCCCEEEECCHHHHCCCEEEEEECCCCEEEHHHEEECCCCCCCHHHHHHHHHHHHH
REYGVNMIAIGNGTASRESESFVSEVLKENNFSDVYYVIVSESGASVYSASELAREEFPE
HHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCC
LTVEKRSAISIARRLQDPLAELVKIEPKAIGVGQYQHDVSEKKLTENLDFVVETVVNQVG
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
VNVNTASPSLLSHVAGLNKSLAQNVVKYREENGALKTRAELKKVPRLGAKAFEQAAGFLR
CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHCCCCEE
IPEGKNFLDNTGVHPESYKVTEQLLAEIAAGPAVSNEELLTKLSSVNIPEMAEKLGLGQE
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHCCCHH
TLTDIINDLKKPGRDLRDSFDAPILRQDVLSAGDLQIGQQLEGVVRNVVDFGAFIDIGIK
HHHHHHHHHHCCCCHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEECC
NDGLAHVSDLSKSFVKNPSDVVAVGQIVTVWVKSLDLQRGKINLTLVNPREED
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]