Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124486534

Identifier: 124486534

GI number: 124486534

Start: 1769871

End: 1770710

Strand: Reverse

Name: 124486534

Synonym: Mlab_1722

Alternate gene names: NA

Gene position: 1770710-1769871 (Counterclockwise)

Preceding gene: 124486538

Following gene: 124486533

Centisome position: 98.1

GC content: 49.88

Gene sequence:

>840_bases
ATGGATTCTCTTATCAACTGGCAGGCTCTGCAAAAACTGAGTATGCCGCAAATGCCTTCGCAGCAAAAGAACGGAGAAAA
TATGTGGGACACGGCCGCGACCATGTACAACAAAATGGCGGCCCTTGAAAAATCTCACACATTGAACCAGATCAACGCCA
TCCCTCTCAGACCAACGGACACAGTTCTTGATATGGGATGCGGACCAGGCCGTATCACGGTCCCCGTTGCTCAGCGTGTG
TCCTCGGTTACCGCCGCCGATTCTGCAGAGTCGATGCTTGCTTACTGTAAGGAGAACGTAAAAAAGGCGAATCTTACAAA
CGTTGATCCGGTATTTCTCGACTTCAATGATGCCGTTATCGGTGAAAACCTTAAAAAACACGATGTGGCAATCTGTTCAC
GTTCCGCCGGTCTTCAGGATTTGAAAAAGCTGAGCTCCTTTGCAGACAGGATCGCAGCTATCGTGATCTGGGCAAATGCC
CCAAGTATCCCGGAACTTCTCGAAAAACTGTTTACCGGAACCGGCAGCGAAGGCCGCAGACCCCATCCCGGAGGAAGAGA
TCGGCGGGTTGGCTACAATCTTTTCTATAATATCGTTTACGATCTTGGGTACGAACCGAACGTACATGTCGTCGATGACG
GATTTACCTGCGAGTACGCCTCCCGCGAAGAGGCCTACAGAGATCTGTCGATCCTTGGCCAGATCGATCCGGATAAAACG
GATGTGTTCCGGCGCAATGTGGATCAGTTCCTCACAGAAAATGCAAACGGTGGATATACTTTCCTTTTGGAGACCAGATC
TGCGGTCATCTGGTGGGACGTCTCTTCAAAAACCTATTAA

Upstream 100 bases:

>100_bases
CACCATGTTAGCATAATATGATTTATTTTTCAATTAATTTGCGAATAGTATTTATCAGTTATCCGACAAATCAATTCTAT
CAATTCTGGAGTTTAACATT

Downstream 100 bases:

>100_bases
CTTCCCGCTCTTTTTTTTCTTTTCGCTGCTGAAAATAGTTTTGCCTCGAAAATCGCAATTTGCGGGAATAGTGGGAATAT
TGGAATATGTAATATGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Methyltransferase; Ribosomal RNA Adenine Dimethylase; SAM-Dependent Methyltransferase; Serine Protease; Cyclopropane-Fatty-Acyl-Phospholipid Synthase

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MDSLINWQALQKLSMPQMPSQQKNGENMWDTAATMYNKMAALEKSHTLNQINAIPLRPTDTVLDMGCGPGRITVPVAQRV
SSVTAADSAESMLAYCKENVKKANLTNVDPVFLDFNDAVIGENLKKHDVAICSRSAGLQDLKKLSSFADRIAAIVIWANA
PSIPELLEKLFTGTGSEGRRPHPGGRDRRVGYNLFYNIVYDLGYEPNVHVVDDGFTCEYASREEAYRDLSILGQIDPDKT
DVFRRNVDQFLTENANGGYTFLLETRSAVIWWDVSSKTY

Sequences:

>Translated_279_residues
MDSLINWQALQKLSMPQMPSQQKNGENMWDTAATMYNKMAALEKSHTLNQINAIPLRPTDTVLDMGCGPGRITVPVAQRV
SSVTAADSAESMLAYCKENVKKANLTNVDPVFLDFNDAVIGENLKKHDVAICSRSAGLQDLKKLSSFADRIAAIVIWANA
PSIPELLEKLFTGTGSEGRRPHPGGRDRRVGYNLFYNIVYDLGYEPNVHVVDDGFTCEYASREEAYRDLSILGQIDPDKT
DVFRRNVDQFLTENANGGYTFLLETRSAVIWWDVSSKTY
>Mature_279_residues
MDSLINWQALQKLSMPQMPSQQKNGENMWDTAATMYNKMAALEKSHTLNQINAIPLRPTDTVLDMGCGPGRITVPVAQRV
SSVTAADSAESMLAYCKENVKKANLTNVDPVFLDFNDAVIGENLKKHDVAICSRSAGLQDLKKLSSFADRIAAIVIWANA
PSIPELLEKLFTGTGSEGRRPHPGGRDRRVGYNLFYNIVYDLGYEPNVHVVDDGFTCEYASREEAYRDLSILGQIDPDKT
DVFRRNVDQFLTENANGGYTFLLETRSAVIWWDVSSKTY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31106; Mature: 31106

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSLINWQALQKLSMPQMPSQQKNGENMWDTAATMYNKMAALEKSHTLNQINAIPLRPTD
CCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TVLDMGCGPGRITVPVAQRVSSVTAADSAESMLAYCKENVKKANLTNVDPVFLDFNDAVI
HHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHH
GENLKKHDVAICSRSAGLQDLKKLSSFADRIAAIVIWANAPSIPELLEKLFTGTGSEGRR
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHCCCCCCCCC
PHPGGRDRRVGYNLFYNIVYDLGYEPNVHVVDDGFTCEYASREEAYRDLSILGQIDPDKT
CCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCEECCCCHHHHHHHHHHHCCCCCCHH
DVFRRNVDQFLTENANGGYTFLLETRSAVIWWDVSSKTY
HHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCCC
>Mature Secondary Structure
MDSLINWQALQKLSMPQMPSQQKNGENMWDTAATMYNKMAALEKSHTLNQINAIPLRPTD
CCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TVLDMGCGPGRITVPVAQRVSSVTAADSAESMLAYCKENVKKANLTNVDPVFLDFNDAVI
HHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHH
GENLKKHDVAICSRSAGLQDLKKLSSFADRIAAIVIWANAPSIPELLEKLFTGTGSEGRR
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHCCCCCCCCC
PHPGGRDRRVGYNLFYNIVYDLGYEPNVHVVDDGFTCEYASREEAYRDLSILGQIDPDKT
CCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCEECCCCHHHHHHHHHHHCCCCCCHH
DVFRRNVDQFLTENANGGYTFLLETRSAVIWWDVSSKTY
HHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA