| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is fecC [C]
Identifier: 124486532
GI number: 124486532
Start: 1767526
End: 1768578
Strand: Reverse
Name: fecC [C]
Synonym: Mlab_1720
Alternate gene names: 124486532
Gene position: 1768578-1767526 (Counterclockwise)
Preceding gene: 124486533
Following gene: 124486531
Centisome position: 97.98
GC content: 50.05
Gene sequence:
>1053_bases ATGGGAAATGATATTGCCGGAAATCTGAGCGGCAGAATAATATCCAACGCAAAATACCGGATGATCTTCATCGGTCTGGT CATAATGGCTGTTGGAATATTTTTCGTATCGCTTGCCGTTGGCAGATACAACATCCCCATTTTCGATACTGTTGCAATTC TTCTGGCCCAGATCTTTCCGATCCAGCCGACATGGACCCAGACGATGGCGGCGGTCATTTTCAATCTCCGTCTCCCGCGA ACCATCGCAGCGGTCCTCATAGGCGGCGGTCTTGCACTTTCCGGGGCCGCATACCAGAGTATGTTCAAAAATCCTCTGGT ATCTCCCGATCTTCTGGGTGTTTCGTCAGGAGCCTGTATCGGAGCATCCTTAGCTATACTTTACAGTCTTGGTCCGGTTA TCATTCAGATATGGGCATTTATAGGCGGTCTTGTCGCCGTGTCGATAACGGTTGCCATCCCCCGTCTGATGCATAACAGT TCCACGCTTATGCTTGTTTTATCCGGTGTGATCGTCGGCGGTCTGATGTCCTCGATCATGGGAATCATCAGGTACGTCGC CGATGCGGATACTGCCCTTGCAGAAATGGTTTACTGGGCGATGGGTTCATTGGCGAATGTCGATATGATCGATCTGTATT ATGTGGCTCCCTGTATGCTTGTGGCGGGTTTCATCCTTCTTCTCTTCAGATATCGTCTCAATGTTTTGTCTCTTGGCGAG GATGAAGCAAAGACTTTGGGCGTTGACGTCCGCAAAGTTCGCGGCGTTATCATCGTTTGTGCAACGCTTTTAACGGCAAG TGCCGTCTGCCTTGCAGGAACGATCGGGTGGGTAGGTCTTGTGATCCCTCACCTTGGAAGAATGCTTGTTGGACCCGACA ACAGGAAGCTTTTGCCGGTTGCCGTGGTTCTTGGAGCGATATTCATGATTCTCATCGATATCACTGCCCGTTCTCTGACC AGCGCCGAACTGCCTCTCAGCATTATCACCGGACTTATCGGAGCACCGTTTTATTTCTATCTGCTTATACGGCAGAGGAT GTCCATCACATGA
Upstream 100 bases:
>100_bases CTACAAAGAATTTGTTGGCATTGATCTAACAAAAGAAGAAGCTCAGAACATGATCAACGGTTACGGACCGAACGGCGAAA CGTATACGTGAGAATAGATA
Downstream 100 bases:
>100_bases AGCTGGAATTATGCCATCTTGGCTTTCATTATCCGAAACAGGAACGGATGATCTTTTCCGATGTCTCCTTTGGTCTCGAC AAGGGAGAGATCATCTCCAT
Product: hypothetical protein
Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MGNDIAGNLSGRIISNAKYRMIFIGLVIMAVGIFFVSLAVGRYNIPIFDTVAILLAQIFPIQPTWTQTMAAVIFNLRLPR TIAAVLIGGGLALSGAAYQSMFKNPLVSPDLLGVSSGACIGASLAILYSLGPVIIQIWAFIGGLVAVSITVAIPRLMHNS STLMLVLSGVIVGGLMSSIMGIIRYVADADTALAEMVYWAMGSLANVDMIDLYYVAPCMLVAGFILLLFRYRLNVLSLGE DEAKTLGVDVRKVRGVIIVCATLLTASAVCLAGTIGWVGLVIPHLGRMLVGPDNRKLLPVAVVLGAIFMILIDITARSLT SAELPLSIITGLIGAPFYFYLLIRQRMSIT
Sequences:
>Translated_350_residues MGNDIAGNLSGRIISNAKYRMIFIGLVIMAVGIFFVSLAVGRYNIPIFDTVAILLAQIFPIQPTWTQTMAAVIFNLRLPR TIAAVLIGGGLALSGAAYQSMFKNPLVSPDLLGVSSGACIGASLAILYSLGPVIIQIWAFIGGLVAVSITVAIPRLMHNS STLMLVLSGVIVGGLMSSIMGIIRYVADADTALAEMVYWAMGSLANVDMIDLYYVAPCMLVAGFILLLFRYRLNVLSLGE DEAKTLGVDVRKVRGVIIVCATLLTASAVCLAGTIGWVGLVIPHLGRMLVGPDNRKLLPVAVVLGAIFMILIDITARSLT SAELPLSIITGLIGAPFYFYLLIRQRMSIT >Mature_349_residues GNDIAGNLSGRIISNAKYRMIFIGLVIMAVGIFFVSLAVGRYNIPIFDTVAILLAQIFPIQPTWTQTMAAVIFNLRLPRT IAAVLIGGGLALSGAAYQSMFKNPLVSPDLLGVSSGACIGASLAILYSLGPVIIQIWAFIGGLVAVSITVAIPRLMHNSS TLMLVLSGVIVGGLMSSIMGIIRYVADADTALAEMVYWAMGSLANVDMIDLYYVAPCMLVAGFILLLFRYRLNVLSLGED EAKTLGVDVRKVRGVIIVCATLLTASAVCLAGTIGWVGLVIPHLGRMLVGPDNRKLLPVAVVLGAIFMILIDITARSLTS AELPLSIITGLIGAPFYFYLLIRQRMSIT
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790741, Length=335, Percent_Identity=32.8358208955224, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI1788004, Length=278, Percent_Identity=37.0503597122302, Blast_Score=130, Evalue=2e-31, Organism=Escherichia coli, GI1790740, Length=280, Percent_Identity=32.5, Blast_Score=126, Evalue=2e-30, Organism=Escherichia coli, GI1786805, Length=282, Percent_Identity=35.8156028368794, Blast_Score=112, Evalue=4e-26, Organism=Escherichia coli, GI1786804, Length=283, Percent_Identity=30.7420494699647, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1786347, Length=291, Percent_Identity=27.8350515463918, Blast_Score=90, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 37251; Mature: 37119
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNDIAGNLSGRIISNAKYRMIFIGLVIMAVGIFFVSLAVGRYNIPIFDTVAILLAQIFP CCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC IQPTWTQTMAAVIFNLRLPRTIAAVLIGGGLALSGAAYQSMFKNPLVSPDLLGVSSGACI CCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH GASLAILYSLGPVIIQIWAFIGGLVAVSITVAIPRLMHNSSTLMLVLSGVIVGGLMSSIM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH GIIRYVADADTALAEMVYWAMGSLANVDMIDLYYVAPCMLVAGFILLLFRYRLNVLSLGE HHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DEAKTLGVDVRKVRGVIIVCATLLTASAVCLAGTIGWVGLVIPHLGRMLVGPDNRKLLPV CHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHH AVVLGAIFMILIDITARSLTSAELPLSIITGLIGAPFYFYLLIRQRMSIT HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GNDIAGNLSGRIISNAKYRMIFIGLVIMAVGIFFVSLAVGRYNIPIFDTVAILLAQIFP CCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC IQPTWTQTMAAVIFNLRLPRTIAAVLIGGGLALSGAAYQSMFKNPLVSPDLLGVSSGACI CCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH GASLAILYSLGPVIIQIWAFIGGLVAVSITVAIPRLMHNSSTLMLVLSGVIVGGLMSSIM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH GIIRYVADADTALAEMVYWAMGSLANVDMIDLYYVAPCMLVAGFILLLFRYRLNVLSLGE HHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DEAKTLGVDVRKVRGVIIVCATLLTASAVCLAGTIGWVGLVIPHLGRMLVGPDNRKLLPV CHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHH AVVLGAIFMILIDITARSLTSAELPLSIITGLIGAPFYFYLLIRQRMSIT HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]
Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]