Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124486403

Identifier: 124486403

GI number: 124486403

Start: 1620107

End: 1620901

Strand: Reverse

Name: 124486403

Synonym: Mlab_1589

Alternate gene names: NA

Gene position: 1620901-1620107 (Counterclockwise)

Preceding gene: 124486404

Following gene: 124486402

Centisome position: 89.8

GC content: 53.33

Gene sequence:

>795_bases
ATGTACATGGATGACGTCTGTCCCGCCCCGGTGAAGGAACGGTACTGGGAAATCGATGCGATACGCGGTTTTTCGCTTCT
GGCGATGATTGCATTCCACACCGTCTTTCTCCTGGGCGTTTTCCACATCATCAATGTGGATGTCTGGCTTGGACTTGGGG
TCTATCTGCCGCTTGGGACAAGCGTTTTCGTTATAATATCCGGGACCTCCCTGATCCTTCGCCACGGCCGGATGCTCGAT
AAACCGCGCCGGGCCTATTATATGGCTATACTGAAACGCGGGATAGAGATCATGCTGATCGGGCTTGGGGTCTCCGTTAT
TGCGTCCCTTTTGATTCTGGTGTTCATCAACGACGGAAGATATGTGTACTTCAACTTCCTGCAGATGATGGGTCTCTCCA
TGATCCTGTGCATCCCGTTTTTACGATTCGGGAAATGGAGCCTGATCCCTGCGGTATCGTTCATCCTGCTCGGTCTCTTT
CTCGAAACGATCAAAGGACCCGCCTTGCTGATGGTTTTCGGGATCCTGCCGCCGGATTTCTATCCGCGTGACTTCTTCCC
CGTTTTTCCCTGGGTCGGCGTTATGCTGCTTGGCGTTTTCCTCGGCTCTCTTCTGTATCCAAACGGGATCCGCAGGTTCA
ATCTCCCCTCGGCGGGTAAGATCGGCCAGAGTCTTGCACTTATCGGCAGGTATCCTCTCGAGATATATCTGGCCCATATC
CCGGTGATTGGGTCCGTCATTCTCGTGATCGTCGTAGTTTCCGGGATGCTCGGTTGTCCCATCGGGCATCTCTGA

Upstream 100 bases:

>100_bases
TTCGGACTCGTGAGCGAACTCGCGAAGAAGGTGTACTGATGACTGCTTGTGGGTGTGTCGTAACAATACTGAACATCTTT
ACCTCGCCGGCCCAATACTA

Downstream 100 bases:

>100_bases
CTTTTTCTAAGGAACTTACTTATCTGCTTAACACCTACATGCCTGAAACAATGAGCGACGAACAGAGCATATCTCCGGGA
TCTCCCCCTTTAGTAAAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MYMDDVCPAPVKERYWEIDAIRGFSLLAMIAFHTVFLLGVFHIINVDVWLGLGVYLPLGTSVFVIISGTSLILRHGRMLD
KPRRAYYMAILKRGIEIMLIGLGVSVIASLLILVFINDGRYVYFNFLQMMGLSMILCIPFLRFGKWSLIPAVSFILLGLF
LETIKGPALLMVFGILPPDFYPRDFFPVFPWVGVMLLGVFLGSLLYPNGIRRFNLPSAGKIGQSLALIGRYPLEIYLAHI
PVIGSVILVIVVVSGMLGCPIGHL

Sequences:

>Translated_264_residues
MYMDDVCPAPVKERYWEIDAIRGFSLLAMIAFHTVFLLGVFHIINVDVWLGLGVYLPLGTSVFVIISGTSLILRHGRMLD
KPRRAYYMAILKRGIEIMLIGLGVSVIASLLILVFINDGRYVYFNFLQMMGLSMILCIPFLRFGKWSLIPAVSFILLGLF
LETIKGPALLMVFGILPPDFYPRDFFPVFPWVGVMLLGVFLGSLLYPNGIRRFNLPSAGKIGQSLALIGRYPLEIYLAHI
PVIGSVILVIVVVSGMLGCPIGHL
>Mature_264_residues
MYMDDVCPAPVKERYWEIDAIRGFSLLAMIAFHTVFLLGVFHIINVDVWLGLGVYLPLGTSVFVIISGTSLILRHGRMLD
KPRRAYYMAILKRGIEIMLIGLGVSVIASLLILVFINDGRYVYFNFLQMMGLSMILCIPFLRFGKWSLIPAVSFILLGLF
LETIKGPALLMVFGILPPDFYPRDFFPVFPWVGVMLLGVFLGSLLYPNGIRRFNLPSAGKIGQSLALIGRYPLEIYLAHI
PVIGSVILVIVVVSGMLGCPIGHL

Specific function: Unknown

COG id: COG3503

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29410; Mature: 29410

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYMDDVCPAPVKERYWEIDAIRGFSLLAMIAFHTVFLLGVFHIINVDVWLGLGVYLPLGT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SVFVIISGTSLILRHGRMLDKPRRAYYMAILKRGIEIMLIGLGVSVIASLLILVFINDGR
EEEEEEECHHHHHHCCHHCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHEECCCC
YVYFNFLQMMGLSMILCIPFLRFGKWSLIPAVSFILLGLFLETIKGPALLMVFGILPPDF
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
YPRDFFPVFPWVGVMLLGVFLGSLLYPNGIRRFNLPSAGKIGQSLALIGRYPLEIYLAHI
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHH
PVIGSVILVIVVVSGMLGCPIGHL
HHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MYMDDVCPAPVKERYWEIDAIRGFSLLAMIAFHTVFLLGVFHIINVDVWLGLGVYLPLGT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SVFVIISGTSLILRHGRMLDKPRRAYYMAILKRGIEIMLIGLGVSVIASLLILVFINDGR
EEEEEEECHHHHHHCCHHCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHEECCCC
YVYFNFLQMMGLSMILCIPFLRFGKWSLIPAVSFILLGLFLETIKGPALLMVFGILPPDF
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
YPRDFFPVFPWVGVMLLGVFLGSLLYPNGIRRFNLPSAGKIGQSLALIGRYPLEIYLAHI
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHH
PVIGSVILVIVVVSGMLGCPIGHL
HHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA