Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124486347

Identifier: 124486347

GI number: 124486347

Start: 1563694

End: 1564383

Strand: Reverse

Name: 124486347

Synonym: Mlab_1532

Alternate gene names: NA

Gene position: 1564383-1563694 (Counterclockwise)

Preceding gene: 124486348

Following gene: 124486346

Centisome position: 86.67

GC content: 43.19

Gene sequence:

>690_bases
ATGAACATTATGAAAAAAACACATAATTCACAAAAAAACAGCGCAGTATCCCCCGTTATCGGTGTTATGCTGATGCTGGT
TGTAACCATCGTTATTGCTGCATTTGTGGCAACATTTGCCGGGGGTCTGTTTTCAACATCTGAAGCAGCGCCGGTTGCAT
CGATCGACGTAAAAATTCTCTACAACTCCGGATATACCGGAAATGATTGTGTCATGTATATCGAAAATTTAGGTGGAGAT
TCCATCCCCACATCAGATCTGCGGATCTTGACCTATTATACATCCAAGACCGGTTCAGCGGCTGGAACTATCAAGGGTGA
TCGTACAGCAATGAATACCAGATCAATTACCGTTACCAATTCAACTGGGGTAACTGGTCAGAAAATCGTTGTACCGATTC
TCTTAAATGCGGCATATGGTGACGCTGCAACTGATAACACTGCCATAAACTTCGGCAACTACAACTTTGCACCCGGGACG
ATAATGAGTACCTACAGCAACGAAGGAACTGCCTATATTCTTATGGGTCAGACAAGTTCAGCGAATCAGCTGAAATACCT
TAACAAATATGATGGTGATACCATCAATGACGGCTATACTGACTTCAGCATCGGATCAAACGTGCATGTTGAAATCATCC
ACACTCCTTCGAACAGTGTTTTGTACAGCAAGGATGTGATCGTAGCATGA

Upstream 100 bases:

>100_bases
CGGTTTACACACTTAAAGATACATCAACGGGCAATGTAATTGCATCGGGTGATCTGTCCGGAAAGGTGTATGATTATATC
TGAAACAGGAGTGTTGAACA

Downstream 100 bases:

>100_bases
AATTCATGAAACATGATTCTGCAGTTTCCCCTGTTGTCGGTGTTATGCTGATGCTGGTTGTAACGATCATCGTTGCAGCC
GTAGTTGCCGCATTTGTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MNIMKKTHNSQKNSAVSPVIGVMLMLVVTIVIAAFVATFAGGLFSTSEAAPVASIDVKILYNSGYTGNDCVMYIENLGGD
SIPTSDLRILTYYTSKTGSAAGTIKGDRTAMNTRSITVTNSTGVTGQKIVVPILLNAAYGDAATDNTAINFGNYNFAPGT
IMSTYSNEGTAYILMGQTSSANQLKYLNKYDGDTINDGYTDFSIGSNVHVEIIHTPSNSVLYSKDVIVA

Sequences:

>Translated_229_residues
MNIMKKTHNSQKNSAVSPVIGVMLMLVVTIVIAAFVATFAGGLFSTSEAAPVASIDVKILYNSGYTGNDCVMYIENLGGD
SIPTSDLRILTYYTSKTGSAAGTIKGDRTAMNTRSITVTNSTGVTGQKIVVPILLNAAYGDAATDNTAINFGNYNFAPGT
IMSTYSNEGTAYILMGQTSSANQLKYLNKYDGDTINDGYTDFSIGSNVHVEIIHTPSNSVLYSKDVIVA
>Mature_229_residues
MNIMKKTHNSQKNSAVSPVIGVMLMLVVTIVIAAFVATFAGGLFSTSEAAPVASIDVKILYNSGYTGNDCVMYIENLGGD
SIPTSDLRILTYYTSKTGSAAGTIKGDRTAMNTRSITVTNSTGVTGQKIVVPILLNAAYGDAATDNTAINFGNYNFAPGT
IMSTYSNEGTAYILMGQTSSANQLKYLNKYDGDTINDGYTDFSIGSNVHVEIIHTPSNSVLYSKDVIVA

Specific function: Unknown

COG id: COG3430

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24235; Mature: 24235

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: PS01307 MOTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIMKKTHNSQKNSAVSPVIGVMLMLVVTIVIAAFVATFAGGLFSTSEAAPVASIDVKIL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEE
YNSGYTGNDCVMYIENLGGDSIPTSDLRILTYYTSKTGSAAGTIKGDRTAMNTRSITVTN
EECCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCEEECCCCEEECCEEEEEEC
STGVTGQKIVVPILLNAAYGDAATDNTAINFGNYNFAPGTIMSTYSNEGTAYILMGQTSS
CCCCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCEEEEEEECCCC
ANQLKYLNKYDGDTINDGYTDFSIGSNVHVEIIHTPSNSVLYSKDVIVA
CCHHHHHHCCCCCCCCCCCEEEECCCCEEEEEEECCCCCEEEECCEEEC
>Mature Secondary Structure
MNIMKKTHNSQKNSAVSPVIGVMLMLVVTIVIAAFVATFAGGLFSTSEAAPVASIDVKIL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEE
YNSGYTGNDCVMYIENLGGDSIPTSDLRILTYYTSKTGSAAGTIKGDRTAMNTRSITVTN
EECCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCEEECCCCEEECCEEEEEEC
STGVTGQKIVVPILLNAAYGDAATDNTAINFGNYNFAPGTIMSTYSNEGTAYILMGQTSS
CCCCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCEEEEEEECCCC
ANQLKYLNKYDGDTINDGYTDFSIGSNVHVEIIHTPSNSVLYSKDVIVA
CCHHHHHHCCCCCCCCCCCEEEECCCCEEEEEEECCCCCEEEECCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA