| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486347
Identifier: 124486347
GI number: 124486347
Start: 1563694
End: 1564383
Strand: Reverse
Name: 124486347
Synonym: Mlab_1532
Alternate gene names: NA
Gene position: 1564383-1563694 (Counterclockwise)
Preceding gene: 124486348
Following gene: 124486346
Centisome position: 86.67
GC content: 43.19
Gene sequence:
>690_bases ATGAACATTATGAAAAAAACACATAATTCACAAAAAAACAGCGCAGTATCCCCCGTTATCGGTGTTATGCTGATGCTGGT TGTAACCATCGTTATTGCTGCATTTGTGGCAACATTTGCCGGGGGTCTGTTTTCAACATCTGAAGCAGCGCCGGTTGCAT CGATCGACGTAAAAATTCTCTACAACTCCGGATATACCGGAAATGATTGTGTCATGTATATCGAAAATTTAGGTGGAGAT TCCATCCCCACATCAGATCTGCGGATCTTGACCTATTATACATCCAAGACCGGTTCAGCGGCTGGAACTATCAAGGGTGA TCGTACAGCAATGAATACCAGATCAATTACCGTTACCAATTCAACTGGGGTAACTGGTCAGAAAATCGTTGTACCGATTC TCTTAAATGCGGCATATGGTGACGCTGCAACTGATAACACTGCCATAAACTTCGGCAACTACAACTTTGCACCCGGGACG ATAATGAGTACCTACAGCAACGAAGGAACTGCCTATATTCTTATGGGTCAGACAAGTTCAGCGAATCAGCTGAAATACCT TAACAAATATGATGGTGATACCATCAATGACGGCTATACTGACTTCAGCATCGGATCAAACGTGCATGTTGAAATCATCC ACACTCCTTCGAACAGTGTTTTGTACAGCAAGGATGTGATCGTAGCATGA
Upstream 100 bases:
>100_bases CGGTTTACACACTTAAAGATACATCAACGGGCAATGTAATTGCATCGGGTGATCTGTCCGGAAAGGTGTATGATTATATC TGAAACAGGAGTGTTGAACA
Downstream 100 bases:
>100_bases AATTCATGAAACATGATTCTGCAGTTTCCCCTGTTGTCGGTGTTATGCTGATGCTGGTTGTAACGATCATCGTTGCAGCC GTAGTTGCCGCATTTGTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MNIMKKTHNSQKNSAVSPVIGVMLMLVVTIVIAAFVATFAGGLFSTSEAAPVASIDVKILYNSGYTGNDCVMYIENLGGD SIPTSDLRILTYYTSKTGSAAGTIKGDRTAMNTRSITVTNSTGVTGQKIVVPILLNAAYGDAATDNTAINFGNYNFAPGT IMSTYSNEGTAYILMGQTSSANQLKYLNKYDGDTINDGYTDFSIGSNVHVEIIHTPSNSVLYSKDVIVA
Sequences:
>Translated_229_residues MNIMKKTHNSQKNSAVSPVIGVMLMLVVTIVIAAFVATFAGGLFSTSEAAPVASIDVKILYNSGYTGNDCVMYIENLGGD SIPTSDLRILTYYTSKTGSAAGTIKGDRTAMNTRSITVTNSTGVTGQKIVVPILLNAAYGDAATDNTAINFGNYNFAPGT IMSTYSNEGTAYILMGQTSSANQLKYLNKYDGDTINDGYTDFSIGSNVHVEIIHTPSNSVLYSKDVIVA >Mature_229_residues MNIMKKTHNSQKNSAVSPVIGVMLMLVVTIVIAAFVATFAGGLFSTSEAAPVASIDVKILYNSGYTGNDCVMYIENLGGD SIPTSDLRILTYYTSKTGSAAGTIKGDRTAMNTRSITVTNSTGVTGQKIVVPILLNAAYGDAATDNTAINFGNYNFAPGT IMSTYSNEGTAYILMGQTSSANQLKYLNKYDGDTINDGYTDFSIGSNVHVEIIHTPSNSVLYSKDVIVA
Specific function: Unknown
COG id: COG3430
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24235; Mature: 24235
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: PS01307 MOTA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIMKKTHNSQKNSAVSPVIGVMLMLVVTIVIAAFVATFAGGLFSTSEAAPVASIDVKIL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEE YNSGYTGNDCVMYIENLGGDSIPTSDLRILTYYTSKTGSAAGTIKGDRTAMNTRSITVTN EECCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCEEECCCCEEECCEEEEEEC STGVTGQKIVVPILLNAAYGDAATDNTAINFGNYNFAPGTIMSTYSNEGTAYILMGQTSS CCCCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCEEEEEEECCCC ANQLKYLNKYDGDTINDGYTDFSIGSNVHVEIIHTPSNSVLYSKDVIVA CCHHHHHHCCCCCCCCCCCEEEECCCCEEEEEEECCCCCEEEECCEEEC >Mature Secondary Structure MNIMKKTHNSQKNSAVSPVIGVMLMLVVTIVIAAFVATFAGGLFSTSEAAPVASIDVKIL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEE YNSGYTGNDCVMYIENLGGDSIPTSDLRILTYYTSKTGSAAGTIKGDRTAMNTRSITVTN EECCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCEEECCCCEEECCEEEEEEC STGVTGQKIVVPILLNAAYGDAATDNTAINFGNYNFAPGTIMSTYSNEGTAYILMGQTSS CCCCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCEEEEEEECCCC ANQLKYLNKYDGDTINDGYTDFSIGSNVHVEIIHTPSNSVLYSKDVIVA CCHHHHHHCCCCCCCCCCCEEEECCCCEEEEEEECCCCCEEEECCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA