Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124486346

Identifier: 124486346

GI number: 124486346

Start: 1563044

End: 1563697

Strand: Reverse

Name: 124486346

Synonym: Mlab_1531

Alternate gene names: NA

Gene position: 1563697-1563044 (Counterclockwise)

Preceding gene: 124486347

Following gene: 124486345

Centisome position: 86.63

GC content: 43.73

Gene sequence:

>654_bases
ATGAAATTCATGAAACATGATTCTGCAGTTTCCCCTGTTGTCGGTGTTATGCTGATGCTGGTTGTAACGATCATCGTTGC
AGCCGTAGTTGCCGCATTTGTCGGCGGCATTACGAGCGATGAACAGATCGCGCCAAGCGTCAATTTTGATGTGTCCTATG
TAGCAGGTATTTCTGATACCGATACAACGAACAGCGTGCCTGATTATTCTTCATCGGCATCAAAAAACAACGGTTTTGTC
TTCAAACTTCTTGGGGGTGACTCTGTTCAGCTTGATAAGATAAAAATCATGTTGACAAGTGACGGGTCTTCGATCACATT
TGATCCGAGTATCTATCGTGATGAAACGAGTCCTGTCGTAAATGAGGCAGCTATTGAAGTAATGCCTGGTACAAATAATA
CGAAGCAGACCTACTTTGCGGTTGCCAATAATCTGGACACCACAATTTCGGTTGGTGAGTCATTTATTCTTCTTGCTGAC
GGATATTACGACAACACAAAAGATGCATCTGCAGTTAAAATAGGCAAATTCCTTCTCTGGACCCCGTCAACGGGCGGCAG
ATTTGTCGTTCAGGAACATGTTCCGGTAACCTATACGATATTCGACACAATTACCGGCAAGCAGATCCAGAAAGGAACAA
TCACCATTAACTGA

Upstream 100 bases:

>100_bases
ATGACGGCTATACTGACTTCAGCATCGGATCAAACGTGCATGTTGAAATCATCCACACTCCTTCGAACAGTGTTTTGTAC
AGCAAGGATGTGATCGTAGC

Downstream 100 bases:

>100_bases
ATGGAGGTGAAGAGAATGCGAACAGATAATGAAAAAAACGATGGGGTTTCCCCTGTTGTCGGTGTTATGCTGATGCTGGT
TGTAACAATCATTGTTGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MKFMKHDSAVSPVVGVMLMLVVTIIVAAVVAAFVGGITSDEQIAPSVNFDVSYVAGISDTDTTNSVPDYSSSASKNNGFV
FKLLGGDSVQLDKIKIMLTSDGSSITFDPSIYRDETSPVVNEAAIEVMPGTNNTKQTYFAVANNLDTTISVGESFILLAD
GYYDNTKDASAVKIGKFLLWTPSTGGRFVVQEHVPVTYTIFDTITGKQIQKGTITIN

Sequences:

>Translated_217_residues
MKFMKHDSAVSPVVGVMLMLVVTIIVAAVVAAFVGGITSDEQIAPSVNFDVSYVAGISDTDTTNSVPDYSSSASKNNGFV
FKLLGGDSVQLDKIKIMLTSDGSSITFDPSIYRDETSPVVNEAAIEVMPGTNNTKQTYFAVANNLDTTISVGESFILLAD
GYYDNTKDASAVKIGKFLLWTPSTGGRFVVQEHVPVTYTIFDTITGKQIQKGTITIN
>Mature_217_residues
MKFMKHDSAVSPVVGVMLMLVVTIIVAAVVAAFVGGITSDEQIAPSVNFDVSYVAGISDTDTTNSVPDYSSSASKNNGFV
FKLLGGDSVQLDKIKIMLTSDGSSITFDPSIYRDETSPVVNEAAIEVMPGTNNTKQTYFAVANNLDTTISVGESFILLAD
GYYDNTKDASAVKIGKFLLWTPSTGGRFVVQEHVPVTYTIFDTITGKQIQKGTITIN

Specific function: Unknown

COG id: COG3430

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23185; Mature: 23185

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFMKHDSAVSPVVGVMLMLVVTIIVAAVVAAFVGGITSDEQIAPSVNFDVSYVAGISDT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCC
DTTNSVPDYSSSASKNNGFVFKLLGGDSVQLDKIKIMLTSDGSSITFDPSIYRDETSPVV
CCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEECCCCEEEECCCEECCCCCCCC
NEAAIEVMPGTNNTKQTYFAVANNLDTTISVGESFILLADGYYDNTKDASAVKIGKFLLW
CCEEEEEECCCCCCCEEEEEEECCCCCEEECCCEEEEEECCCCCCCCCCCEEEECEEEEE
TPSTGGRFVVQEHVPVTYTIFDTITGKQIQKGTITIN
CCCCCCEEEEECCCCEEEEEEECCCCCEEECCEEEEC
>Mature Secondary Structure
MKFMKHDSAVSPVVGVMLMLVVTIIVAAVVAAFVGGITSDEQIAPSVNFDVSYVAGISDT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCC
DTTNSVPDYSSSASKNNGFVFKLLGGDSVQLDKIKIMLTSDGSSITFDPSIYRDETSPVV
CCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEECCCCEEEECCCEECCCCCCCC
NEAAIEVMPGTNNTKQTYFAVANNLDTTISVGESFILLADGYYDNTKDASAVKIGKFLLW
CCEEEEEECCCCCCCEEEEEEECCCCCEEECCCEEEEEECCCCCCCCCCCEEEECEEEEE
TPSTGGRFVVQEHVPVTYTIFDTITGKQIQKGTITIN
CCCCCCEEEEECCCCEEEEEEECCCCCEEECCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA