| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486348
Identifier: 124486348
GI number: 124486348
Start: 1564401
End: 1565078
Strand: Reverse
Name: 124486348
Synonym: Mlab_1533
Alternate gene names: NA
Gene position: 1565078-1564401 (Counterclockwise)
Preceding gene: 124486349
Following gene: 124486347
Centisome position: 86.71
GC content: 46.02
Gene sequence:
>678_bases ATGAAGTCTAAAAACAAGGAATCTGGGGTCTCCCCGGTTGTCGGCGTTATGCTGATGCTGGTTGTAACGATTATTATTGC AGCAGTTGTGGGAATGGTTGCAGCCAACTATGTAGGAAGTACGGAGGCATCGCCGATGACAAGGATCAACTACCTTGGTT CTGTTCAGGGAAATGATTTTGAAAACGGCTTTTTAGGCGAAGTCGGTCTTCTTTTTGAAAATATCGGTGGTGAAAACATT GTTCTGACAAATCTGGAGCTCACTCTGCAGGAAAATACCCGTGGTGTTGTGAATGAAACGACAATTACGTTTAATGACGC CCCCTCAACCGCGATTTCCGGCATCCTGACACCCGGAGAAGCCCGTCTGTCTATTACACCATCAGCCAAAAAGGTTGACT ACCGGATGAAAAAGGTAGGCGTCACCATGAAATACGGGACGTATCTTGCTTATCAGACCATTGAGCCGGGAGAACGTTTC ATCATTTATACCGACCGGATTATCCAGAGTGACACATCAAAGTATAGTCAGCTCTACATGGCCGCAACGAGAGACGGCAC ATACTCGGAAGGATTTTTCGAGATTGGTCCGGGAACGGTTTACACACTTAAAGATACATCAACGGGCAATGTAATTGCAT CGGGTGATCTGTCCGGAAAGGTGTATGATTATATCTGA
Upstream 100 bases:
>100_bases AAGCATTAACCTATGGAATTGATACTGGAACGACATTCCATGTAACGATCGTTCACATTCCAACCAGCACCGTCATTTAT GACAAGGATGTGAGAATCCA
Downstream 100 bases:
>100_bases AACAGGAGTGTTGAACAATGAACATTATGAAAAAAACACATAATTCACAAAAAAACAGCGCAGTATCCCCCGTTATCGGT GTTATGCTGATGCTGGTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MKSKNKESGVSPVVGVMLMLVVTIIIAAVVGMVAANYVGSTEASPMTRINYLGSVQGNDFENGFLGEVGLLFENIGGENI VLTNLELTLQENTRGVVNETTITFNDAPSTAISGILTPGEARLSITPSAKKVDYRMKKVGVTMKYGTYLAYQTIEPGERF IIYTDRIIQSDTSKYSQLYMAATRDGTYSEGFFEIGPGTVYTLKDTSTGNVIASGDLSGKVYDYI
Sequences:
>Translated_225_residues MKSKNKESGVSPVVGVMLMLVVTIIIAAVVGMVAANYVGSTEASPMTRINYLGSVQGNDFENGFLGEVGLLFENIGGENI VLTNLELTLQENTRGVVNETTITFNDAPSTAISGILTPGEARLSITPSAKKVDYRMKKVGVTMKYGTYLAYQTIEPGERF IIYTDRIIQSDTSKYSQLYMAATRDGTYSEGFFEIGPGTVYTLKDTSTGNVIASGDLSGKVYDYI >Mature_225_residues MKSKNKESGVSPVVGVMLMLVVTIIIAAVVGMVAANYVGSTEASPMTRINYLGSVQGNDFENGFLGEVGLLFENIGGENI VLTNLELTLQENTRGVVNETTITFNDAPSTAISGILTPGEARLSITPSAKKVDYRMKKVGVTMKYGTYLAYQTIEPGERF IIYTDRIIQSDTSKYSQLYMAATRDGTYSEGFFEIGPGTVYTLKDTSTGNVIASGDLSGKVYDYI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24284; Mature: 24284
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKNKESGVSPVVGVMLMLVVTIIIAAVVGMVAANYVGSTEASPMTRINYLGSVQGNDF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCC ENGFLGEVGLLFENIGGENIVLTNLELTLQENTRGVVNETTITFNDAPSTAISGILTPGE CCCCCHHHHHHHHHCCCCEEEEEEEEEEEECCCCCEEEEEEEEECCCCCHHHHEEECCCC ARLSITPSAKKVDYRMKKVGVTMKYGTYLAYQTIEPGERFIIYTDRIIQSDTSKYSQLYM CEEEECCCCHHHHHHHHHHCEEEECCCEEEEEECCCCCEEEEEECHHHHCCCHHHHEEEE AATRDGTYSEGFFEIGPGTVYTLKDTSTGNVIASGDLSGKVYDYI EEECCCCCCCCEEEECCCEEEEEECCCCCCEEEECCCCCEEECCC >Mature Secondary Structure MKSKNKESGVSPVVGVMLMLVVTIIIAAVVGMVAANYVGSTEASPMTRINYLGSVQGNDF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCC ENGFLGEVGLLFENIGGENIVLTNLELTLQENTRGVVNETTITFNDAPSTAISGILTPGE CCCCCHHHHHHHHHCCCCEEEEEEEEEEEECCCCCEEEEEEEEECCCCCHHHHEEECCCC ARLSITPSAKKVDYRMKKVGVTMKYGTYLAYQTIEPGERFIIYTDRIIQSDTSKYSQLYM CEEEECCCCHHHHHHHHHHCEEEECCCEEEEEECCCCCEEEEEECHHHHCCCHHHHEEEE AATRDGTYSEGFFEIGPGTVYTLKDTSTGNVIASGDLSGKVYDYI EEECCCCCCCCEEEECCCEEEEEECCCCCCEEEECCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA