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The map label for this gene is srp19 [H]

Identifier: 124486329

GI number: 124486329

Start: 1549053

End: 1549325

Strand: Reverse

Name: srp19 [H]

Synonym: Mlab_1514

Alternate gene names: 124486329

Gene position: 1549325-1549053 (Counterclockwise)

Preceding gene: 124486334

Following gene: 124486328

Centisome position: 85.84

GC content: 53.11

Gene sequence:

>273_bases
ATGGCAATTCGTTTTCTTTACCCGTGCTATTTTGATGCCTCTCTAACCAGAAGCGAGGGAAGGCGTGTAGCAATGAGTCT
GGCTGTTTCCGCTCCGAATATGGCTATGATCTCCCGCGCTGCAAAAGTATGCGGAGTCTCTGTTCTCGATGAGGAACGCG
ATGCCCATCATCCGGCGCAGTGGTATAAGGCCGGCGGACGTATTCGCGTGGAGTATGCCGGATCCAAAGAAGATCTTCTG
AGAAGCGTCGCCGGAAAACTCGGCGGGAAGTAA

Upstream 100 bases:

>100_bases
ATTTAGTATGTGATTTGGAAGCCCTCCGGTTGGTATATGGGTTCGGACAATCTCTCAGGCACGAAAGCCATTTTGGCTTT
CACATCATATACTAGTACTA

Downstream 100 bases:

>100_bases
GCATGTACGATTTCCACTGTCATACAACGATGAGCGACGGCGAACTGATCCCGACCGAACTGATCCGCCGGATGGCAGTT
GCCGGATATACGGAGATGGC

Product: signal recognition particle, subunit SRP19 (srp19)

Products: NA

Alternate protein names: SRP19 [H]

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MAIRFLYPCYFDASLTRSEGRRVAMSLAVSAPNMAMISRAAKVCGVSVLDEERDAHHPAQWYKAGGRIRVEYAGSKEDLL
RSVAGKLGGK

Sequences:

>Translated_90_residues
MAIRFLYPCYFDASLTRSEGRRVAMSLAVSAPNMAMISRAAKVCGVSVLDEERDAHHPAQWYKAGGRIRVEYAGSKEDLL
RSVAGKLGGK
>Mature_89_residues
AIRFLYPCYFDASLTRSEGRRVAMSLAVSAPNMAMISRAAKVCGVSVLDEERDAHHPAQWYKAGGRIRVEYAGSKEDLLR
SVAGKLGGK

Specific function: Signal-recognition-particle assembly, binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP [H]

COG id: COG1400

COG function: function code U; Signal recognition particle 19 kDa protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SRP19 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002778
- InterPro:   IPR022938 [H]

Pfam domain/function: PF01922 SRP19 [H]

EC number: NA

Molecular weight: Translated: 9846; Mature: 9715

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIRFLYPCYFDASLTRSEGRRVAMSLAVSAPNMAMISRAAKVCGVSVLDEERDAHHPAQ
CCEEEEECEECCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCHHHCCCCCCCCCHH
WYKAGGRIRVEYAGSKEDLLRSVAGKLGGK
HHHCCCEEEEEECCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AIRFLYPCYFDASLTRSEGRRVAMSLAVSAPNMAMISRAAKVCGVSVLDEERDAHHPAQ
CEEEEECEECCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCHHHCCCCCCCCCHH
WYKAGGRIRVEYAGSKEDLLRSVAGKLGGK
HHHCCCEEEEEECCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA