| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486287
Identifier: 124486287
GI number: 124486287
Start: 1509493
End: 1510230
Strand: Reverse
Name: 124486287
Synonym: Mlab_1471
Alternate gene names: NA
Gene position: 1510230-1509493 (Counterclockwise)
Preceding gene: 124486290
Following gene: 124486286
Centisome position: 83.67
GC content: 49.05
Gene sequence:
>738_bases ATGAATGCGCATACAGCTGATGACGGCGTCGCCGAAGTAATTGGATTTATCCTGATTATCGCTTTGATCGTGGCAGTTGC GGCTGTGTGGATTCTCGTGTATATTCCGTCACAAGGAAATGCGGTCGAGACGGAACATGCCCGTGTGGTCACTGAAGAAA TTGCTGACATCAAATATGGGATTGATCTGCTCTGGACAACGGAACAGACCGGCATAAATGTAAGTCGTGTCCTCTCTCCA TCTCCTGTGGAAGGGACGGAGTTGTCAGGTTTGTTGTTTTTATCCCCGCCTGTTGGTACCGGGACGATCACTGTTAGCAA CGGAACGGCGTTTTGGATCAATCAGACTCTGCCGACAGGTAGTACGCAAACTGCGGTTTCCGCTCTCAAAATAACCTATA ACTCTGCAAACTATTATGCTCCGGATATCCGTATCGTCTATGACGGCGGAGCGGTTTTCCGTGGAAAGAAAAATGCGGCG CCGTATGTTTTTCTTCCCCCGTCTGCGGGATCTTCGGACCTTGTCCTTGTGACCGTCCCTTCGAACTACGGTGAACAGCA GATCCTTGGAAATATTCCCCTGAGTCTGACATACAAATATCTTGACTATGAGATCTACCCTGATGCGACTGTAGCATTAT ACCAGCCAGATCCGGATAATCCCTGGAACGATTTTGTCGGAACATTCGATACCGTTACCGTGGTCAAGTATGAGGTTGCG GCAGGAGGTCCTCAATGA
Upstream 100 bases:
>100_bases GTTTTTGCTTATATGCATTGCGCCACGGTTCATATTCCTTATCCAGAAGTATTCTATAGTGTTCACAGCAAAACTACACA ATAATCATAATTTAGGCACT
Downstream 100 bases:
>100_bases ACAAAAATGCCGATTCCGGTCTTTCGGAAGTTGTCAGTGTGGCGCTGATTTTAACCGTCCTTATTCTTGTTATAATAATG TGGGTGCTGATTGCTTTTCC
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MNAHTADDGVAEVIGFILIIALIVAVAAVWILVYIPSQGNAVETEHARVVTEEIADIKYGIDLLWTTEQTGINVSRVLSP SPVEGTELSGLLFLSPPVGTGTITVSNGTAFWINQTLPTGSTQTAVSALKITYNSANYYAPDIRIVYDGGAVFRGKKNAA PYVFLPPSAGSSDLVLVTVPSNYGEQQILGNIPLSLTYKYLDYEIYPDATVALYQPDPDNPWNDFVGTFDTVTVVKYEVA AGGPQ
Sequences:
>Translated_245_residues MNAHTADDGVAEVIGFILIIALIVAVAAVWILVYIPSQGNAVETEHARVVTEEIADIKYGIDLLWTTEQTGINVSRVLSP SPVEGTELSGLLFLSPPVGTGTITVSNGTAFWINQTLPTGSTQTAVSALKITYNSANYYAPDIRIVYDGGAVFRGKKNAA PYVFLPPSAGSSDLVLVTVPSNYGEQQILGNIPLSLTYKYLDYEIYPDATVALYQPDPDNPWNDFVGTFDTVTVVKYEVA AGGPQ >Mature_245_residues MNAHTADDGVAEVIGFILIIALIVAVAAVWILVYIPSQGNAVETEHARVVTEEIADIKYGIDLLWTTEQTGINVSRVLSP SPVEGTELSGLLFLSPPVGTGTITVSNGTAFWINQTLPTGSTQTAVSALKITYNSANYYAPDIRIVYDGGAVFRGKKNAA PYVFLPPSAGSSDLVLVTVPSNYGEQQILGNIPLSLTYKYLDYEIYPDATVALYQPDPDNPWNDFVGTFDTVTVVKYEVA AGGPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26235; Mature: 26235
Theoretical pI: Translated: 4.01; Mature: 4.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAHTADDGVAEVIGFILIIALIVAVAAVWILVYIPSQGNAVETEHARVVTEEIADIKYG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEECCHHHHHHHHHHHHHHCC IDLLWTTEQTGINVSRVLSPSPVEGTELSGLLFLSPPVGTGTITVSNGTAFWINQTLPTG EEEEEECCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCEEEEEECCCCCC STQTAVSALKITYNSANYYAPDIRIVYDGGAVFRGKKNAAPYVFLPPSAGSSDLVLVTVP CCHHEEEEEEEEECCCCEECCEEEEEECCCEEEECCCCCCCEEEECCCCCCCCEEEEEEC SNYGEQQILGNIPLSLTYKYLDYEIYPDATVALYQPDPDNPWNDFVGTFDTVTVVKYEVA CCCCCCCEECCCCEEEEEEEEEEEECCCCEEEEECCCCCCCHHHHCCCCCEEEEEEEEEC AGGPQ CCCCC >Mature Secondary Structure MNAHTADDGVAEVIGFILIIALIVAVAAVWILVYIPSQGNAVETEHARVVTEEIADIKYG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEECCHHHHHHHHHHHHHHCC IDLLWTTEQTGINVSRVLSPSPVEGTELSGLLFLSPPVGTGTITVSNGTAFWINQTLPTG EEEEEECCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCEEEEEECCCCCC STQTAVSALKITYNSANYYAPDIRIVYDGGAVFRGKKNAAPYVFLPPSAGSSDLVLVTVP CCHHEEEEEEEEECCCCEECCEEEEEECCCEEEECCCCCCCEEEECCCCCCCCEEEEEEC SNYGEQQILGNIPLSLTYKYLDYEIYPDATVALYQPDPDNPWNDFVGTFDTVTVVKYEVA CCCCCCCEECCCCEEEEEEEEEEEECCCCEEEEECCCCCCCHHHHCCCCCEEEEEEEEEC AGGPQ CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA