| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is guaB [H]
Identifier: 124486199
GI number: 124486199
Start: 1408552
End: 1410021
Strand: Reverse
Name: guaB [H]
Synonym: Mlab_1382
Alternate gene names: 124486199
Gene position: 1410021-1408552 (Counterclockwise)
Preceding gene: 124486200
Following gene: 124486185
Centisome position: 78.12
GC content: 53.61
Gene sequence:
>1470_bases ATGTTTGGAGAAAAACTCAACATCCCTACGGCACTCACCTTCGATGATGTGCTGATTGAACCGGCAGAATCCTGGATAGA GCCAAATGATGTAGATGTTCGATCCAGATTCTCTAAAAACATTTCACTCTCCATACCTTTGGTGAGTGCGGCAATGGACA CAGTTACCGAGGCGGAAATGGCAATTTCTATGGCACGCGCCGGAGGTATCGGCGTTCTGCACAGAAACTGTACGCCCGAT GAAGAGGTCTCCTTTGTCACCCGCGTTAAGTCGGCTGACAATGTCATCGAACGTGATGTCAGATACGTGACCCCCGACAC GACCATTGCTCTTGTGGCAAATCTCATGGACCGCCACTCGATCGGCGGCGTGCCGGTCGTTGGTCCTCACGGCAAACTTC TCGGCATCGTTTCGCGCCGGGATGTCCGCGGCCTTGTTAACAAGACCGGGACGGAAACCGTCGAAACGATCATGACCAAA AAACCGATCGCCGTGAAAGACAATATCACTGCAGATGATGCCATCAATATGATGTACACCAAAAAGGTCGAGCGTCTTCC GGTCGTTGATGACAAAGGCAGACTGACAGGTATCATCACCATGCAGGATCTGCTTGAAAAACAGCAGTATCCGAAAGCCA ACCGCGATGCAAACGGAAAACTCCGTGTCGCCGCCGCAGTTGGACCGTTCGACATGGAGCGTGCATTAAAACTCGCAGAG GCAGGCGTTGATGCGATCGTTGTGGACTGTGCCCACGGCCATAATATGCATGTTGTCCAGGGAGTAAAAGCGATCAAAGG CGCCGTCTCATGCGATGTCGTCGCCGGAAATATCGCCACCTCGAAAGCTGCCGGCGAACTTGTAGGGTTCGTTGACGGGA TCAAAGTCGGCATCGGTCCAGGTTCGATTTGTACGACCCGTATCGTTGCTGGTGTCGGCGTTCCGCAGATCTCTGCCATC GCCAACGTATGTGATGTCGCAGATCCATGTGGCGTCCCGGTCATCGCAGACGGCGGCGTCAAATACAGCGGTGATGTGGC CAAGGCAATCGTAGCTGGCGCTTCGTCAGTAATGATGGGCAGTATGTTTGCCGGAACCGACGAGGCTCCAGGTAAAACGA TCATCGTCAAAGGCCGGAGATACAAACAGTACCGCGGCATGGGATCGCTCGGCGTCATGACCTCTGGAAATTCAAGCGAC CGCTACTTCCAGAAGAAAGGTATCGGCTCGACCAAGTATGTTCCGGAAGGCGTCGAAGGTGCCACTCCGTATGTCGGTTC CGTGACCGATGTCATCTATCAGACGATCGGCGGTCTCAAATCGGCGATGGGATATTCCGGAAGCAAGGATATCGAAACTA TGCGGACGAATGCCAGGTTCGTCAGAATTACCTCCGCGGGACTGAAAGAGTCCCACCCCCACGACATCCTGATCACCGAT GAAGCACCGAACTACCGTACCAATCTCTGA
Upstream 100 bases:
>100_bases AGATCATCGGTGTCCGCGGCATGGTTTGCGGCGGAGACAGAACAACCATGGTTCAGGAAAGTCTCGTAAAGAAAGCGATT CAGATGGTAAGGTAAACAAC
Downstream 100 bases:
>100_bases ATTGGTACTTCTGTTTTTATTCCGAAATTAAAAAGAATAGGACTTACACGTTGTTATCCTTAATCCACGTCGGTAAGGGT ATTACTGGGTGTTGAAACAT
Product: inosine-5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MFGEKLNIPTALTFDDVLIEPAESWIEPNDVDVRSRFSKNISLSIPLVSAAMDTVTEAEMAISMARAGGIGVLHRNCTPD EEVSFVTRVKSADNVIERDVRYVTPDTTIALVANLMDRHSIGGVPVVGPHGKLLGIVSRRDVRGLVNKTGTETVETIMTK KPIAVKDNITADDAINMMYTKKVERLPVVDDKGRLTGIITMQDLLEKQQYPKANRDANGKLRVAAAVGPFDMERALKLAE AGVDAIVVDCAHGHNMHVVQGVKAIKGAVSCDVVAGNIATSKAAGELVGFVDGIKVGIGPGSICTTRIVAGVGVPQISAI ANVCDVADPCGVPVIADGGVKYSGDVAKAIVAGASSVMMGSMFAGTDEAPGKTIIVKGRRYKQYRGMGSLGVMTSGNSSD RYFQKKGIGSTKYVPEGVEGATPYVGSVTDVIYQTIGGLKSAMGYSGSKDIETMRTNARFVRITSAGLKESHPHDILITD EAPNYRTNL
Sequences:
>Translated_489_residues MFGEKLNIPTALTFDDVLIEPAESWIEPNDVDVRSRFSKNISLSIPLVSAAMDTVTEAEMAISMARAGGIGVLHRNCTPD EEVSFVTRVKSADNVIERDVRYVTPDTTIALVANLMDRHSIGGVPVVGPHGKLLGIVSRRDVRGLVNKTGTETVETIMTK KPIAVKDNITADDAINMMYTKKVERLPVVDDKGRLTGIITMQDLLEKQQYPKANRDANGKLRVAAAVGPFDMERALKLAE AGVDAIVVDCAHGHNMHVVQGVKAIKGAVSCDVVAGNIATSKAAGELVGFVDGIKVGIGPGSICTTRIVAGVGVPQISAI ANVCDVADPCGVPVIADGGVKYSGDVAKAIVAGASSVMMGSMFAGTDEAPGKTIIVKGRRYKQYRGMGSLGVMTSGNSSD RYFQKKGIGSTKYVPEGVEGATPYVGSVTDVIYQTIGGLKSAMGYSGSKDIETMRTNARFVRITSAGLKESHPHDILITD EAPNYRTNL >Mature_489_residues MFGEKLNIPTALTFDDVLIEPAESWIEPNDVDVRSRFSKNISLSIPLVSAAMDTVTEAEMAISMARAGGIGVLHRNCTPD EEVSFVTRVKSADNVIERDVRYVTPDTTIALVANLMDRHSIGGVPVVGPHGKLLGIVSRRDVRGLVNKTGTETVETIMTK KPIAVKDNITADDAINMMYTKKVERLPVVDDKGRLTGIITMQDLLEKQQYPKANRDANGKLRVAAAVGPFDMERALKLAE AGVDAIVVDCAHGHNMHVVQGVKAIKGAVSCDVVAGNIATSKAAGELVGFVDGIKVGIGPGSICTTRIVAGVGVPQISAI ANVCDVADPCGVPVIADGGVKYSGDVAKAIVAGASSVMMGSMFAGTDEAPGKTIIVKGRRYKQYRGMGSLGVMTSGNSSD RYFQKKGIGSTKYVPEGVEGATPYVGSVTDVIYQTIGGLKSAMGYSGSKDIETMRTNARFVRITSAGLKESHPHDILITD EAPNYRTNL
Specific function: IMP is the rate limiting enzyme in the de novo synthesis of guanine nucleotides and therefore is involved in the regulation of cell growth [H]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI66933016, Length=486, Percent_Identity=37.037037037037, Blast_Score=276, Evalue=2e-74, Organism=Homo sapiens, GI217035146, Length=455, Percent_Identity=37.5824175824176, Blast_Score=274, Evalue=1e-73, Organism=Homo sapiens, GI34328928, Length=455, Percent_Identity=37.5824175824176, Blast_Score=274, Evalue=1e-73, Organism=Homo sapiens, GI156616279, Length=455, Percent_Identity=37.5824175824176, Blast_Score=274, Evalue=1e-73, Organism=Homo sapiens, GI34328930, Length=455, Percent_Identity=37.5824175824176, Blast_Score=274, Evalue=2e-73, Organism=Homo sapiens, GI217035152, Length=451, Percent_Identity=37.4722838137472, Blast_Score=268, Evalue=9e-72, Organism=Homo sapiens, GI217035148, Length=455, Percent_Identity=37.5824175824176, Blast_Score=266, Evalue=5e-71, Organism=Homo sapiens, GI217035150, Length=455, Percent_Identity=35.8241758241758, Blast_Score=239, Evalue=3e-63, Organism=Homo sapiens, GI156104880, Length=295, Percent_Identity=33.5593220338983, Blast_Score=145, Evalue=7e-35, Organism=Homo sapiens, GI50541954, Length=297, Percent_Identity=33.6700336700337, Blast_Score=145, Evalue=8e-35, Organism=Homo sapiens, GI50541952, Length=297, Percent_Identity=33.6700336700337, Blast_Score=145, Evalue=8e-35, Organism=Homo sapiens, GI50541948, Length=297, Percent_Identity=33.6700336700337, Blast_Score=145, Evalue=8e-35, Organism=Homo sapiens, GI50541956, Length=297, Percent_Identity=33.6700336700337, Blast_Score=145, Evalue=8e-35, Organism=Escherichia coli, GI1788855, Length=480, Percent_Identity=45.4166666666667, Blast_Score=393, Evalue=1e-110, Organism=Escherichia coli, GI1786293, Length=275, Percent_Identity=31.2727272727273, Blast_Score=125, Evalue=5e-30, Organism=Caenorhabditis elegans, GI71994385, Length=481, Percent_Identity=31.8087318087318, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI71994389, Length=429, Percent_Identity=33.1002331002331, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17560440, Length=241, Percent_Identity=35.6846473029046, Blast_Score=135, Evalue=4e-32, Organism=Saccharomyces cerevisiae, GI6322012, Length=483, Percent_Identity=35.8178053830228, Blast_Score=296, Evalue=4e-81, Organism=Saccharomyces cerevisiae, GI6323464, Length=483, Percent_Identity=36.231884057971, Blast_Score=293, Evalue=6e-80, Organism=Saccharomyces cerevisiae, GI6323585, Length=483, Percent_Identity=36.231884057971, Blast_Score=288, Evalue=1e-78, Organism=Saccharomyces cerevisiae, GI6319352, Length=338, Percent_Identity=35.7988165680473, Blast_Score=223, Evalue=5e-59, Organism=Saccharomyces cerevisiae, GI6319353, Length=119, Percent_Identity=36.9747899159664, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24641071, Length=482, Percent_Identity=36.7219917012448, Blast_Score=274, Evalue=1e-73, Organism=Drosophila melanogaster, GI24641073, Length=482, Percent_Identity=36.7219917012448, Blast_Score=274, Evalue=1e-73, Organism=Drosophila melanogaster, GI28571163, Length=442, Percent_Identity=36.6515837104072, Blast_Score=245, Evalue=5e-65,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 51753; Mature: 51753
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGEKLNIPTALTFDDVLIEPAESWIEPNDVDVRSRFSKNISLSIPLVSAAMDTVTEAEM CCCCCCCCCEEEEHHHHHCCCHHHCCCCCCCCHHHHHCCCCEEEEHHHHHHHHHHHHHHH AISMARAGGIGVLHRNCTPDEEVSFVTRVKSADNVIERDVRYVTPDTTIALVANLMDRHS HHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHC IGGVPVVGPHGKLLGIVSRRDVRGLVNKTGTETVETIMTKKPIAVKDNITADDAINMMYT CCCCEEECCCCCEEEEECHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHH KKVERLPVVDDKGRLTGIITMQDLLEKQQYPKANRDANGKLRVAAAVGPFDMERALKLAE HHHHHCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCHHHHHHHHH AGVDAIVVDCAHGHNMHVVQGVKAIKGAVSCDVVAGNIATSKAAGELVGFVDGIKVGIGP CCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCEEECCCC GSICTTRIVAGVGVPQISAIANVCDVADPCGVPVIADGGVKYSGDVAKAIVAGASSVMMG CHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEECCCEEECCHHHHHHHHCCHHHHHH SMFAGTDEAPGKTIIVKGRRYKQYRGMGSLGVMTSGNSSDRYFQKKGIGSTKYVPEGVEG HHHCCCCCCCCCEEEEECCHHHHHCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCC ATPYVGSVTDVIYQTIGGLKSAMGYSGSKDIETMRTNARFVRITSAGLKESHPHDILITD CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEEEEECCCCCCCCCEEEEEC EAPNYRTNL CCCCCCCCC >Mature Secondary Structure MFGEKLNIPTALTFDDVLIEPAESWIEPNDVDVRSRFSKNISLSIPLVSAAMDTVTEAEM CCCCCCCCCEEEEHHHHHCCCHHHCCCCCCCCHHHHHCCCCEEEEHHHHHHHHHHHHHHH AISMARAGGIGVLHRNCTPDEEVSFVTRVKSADNVIERDVRYVTPDTTIALVANLMDRHS HHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHC IGGVPVVGPHGKLLGIVSRRDVRGLVNKTGTETVETIMTKKPIAVKDNITADDAINMMYT CCCCEEECCCCCEEEEECHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHH KKVERLPVVDDKGRLTGIITMQDLLEKQQYPKANRDANGKLRVAAAVGPFDMERALKLAE HHHHHCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCHHHHHHHHH AGVDAIVVDCAHGHNMHVVQGVKAIKGAVSCDVVAGNIATSKAAGELVGFVDGIKVGIGP CCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCEEECCCC GSICTTRIVAGVGVPQISAIANVCDVADPCGVPVIADGGVKYSGDVAKAIVAGASSVMMG CHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEECCCEEECCHHHHHHHHCCHHHHHH SMFAGTDEAPGKTIIVKGRRYKQYRGMGSLGVMTSGNSSDRYFQKKGIGSTKYVPEGVEG HHHCCCCCCCCCEEEEECCHHHHHCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCC ATPYVGSVTDVIYQTIGGLKSAMGYSGSKDIETMRTNARFVRITSAGLKESHPHDILITD CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEEEEECCCCCCCCCEEEEEC EAPNYRTNL CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]