| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486048
Identifier: 124486048
GI number: 124486048
Start: 1257139
End: 1257690
Strand: Reverse
Name: 124486048
Synonym: Mlab_1228
Alternate gene names: NA
Gene position: 1257690-1257139 (Counterclockwise)
Preceding gene: 124486050
Following gene: 124486047
Centisome position: 69.68
GC content: 54.35
Gene sequence:
>552_bases ATGGAAAAAACAGAGGCACTCACGCTTCTCAAACAACATGTAGCCACTCCCTCGCTTGTCGGTCACTGTATCTCGACCGC CGCCGTCATGAGAGGTCTGGCTGCTGAGTTGGGACAAGATGCTGTCCTTTGGGAAACGATCGGCATCCTTCACGACATCG ACTTCGAGGAGATCGACGAGGATATGGAAAAGCACGGACTTGCCGGATACGAGATCCTTCGTGCGGCAGGTGTCGGCGAC GAGATCGCTCTTCCGATCAAACGCCACAATCACATGATATTTGGTACCGACTATACGACCCCTGTGGAGATCTGTCTCCA GGTCGCCGACAGCGTGTCTGGACTGATCGTCGCCTGTGCGTATGTCAAGGGAGGAAACATATCCGATGTGACGGTGAAGA CGGTCACGAAGAAGTACAAGACCCCTTCGTTCGCCGCAGGATGCGACCGGACAAGGATCGCTCTTGGCGACGCTCTTATC CCGAGGGAACGAATGTATGAGATCGCTATCTCCGAGATCACTGCGGTAAAAGACGAACTGGGGCTGAACTGA
Upstream 100 bases:
>100_bases GATTGCCGAGACGCCGATGATCACATCAAGTATCCAATCTTGCATACAAATACATTGTGCGTCGAGACTCTTATCCCTTT TCATATCCAATAAATAGGAC
Downstream 100 bases:
>100_bases TGGGTGCCGGAGCACAGTCGGCGGTTCTCCGCGATCTGCAGAAGGCTCACGGCAAACTGCAGGATGTCTCGCGCTATATC ATTCCGCGTGACGATCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: HDIG Domain-Containing Protein; Hydrolase; Hydrolase Family Protein; HD Superfamily Hydrolase; Metal Dependent Phophohydrolase
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MEKTEALTLLKQHVATPSLVGHCISTAAVMRGLAAELGQDAVLWETIGILHDIDFEEIDEDMEKHGLAGYEILRAAGVGD EIALPIKRHNHMIFGTDYTTPVEICLQVADSVSGLIVACAYVKGGNISDVTVKTVTKKYKTPSFAAGCDRTRIALGDALI PRERMYEIAISEITAVKDELGLN
Sequences:
>Translated_183_residues MEKTEALTLLKQHVATPSLVGHCISTAAVMRGLAAELGQDAVLWETIGILHDIDFEEIDEDMEKHGLAGYEILRAAGVGD EIALPIKRHNHMIFGTDYTTPVEICLQVADSVSGLIVACAYVKGGNISDVTVKTVTKKYKTPSFAAGCDRTRIALGDALI PRERMYEIAISEITAVKDELGLN >Mature_183_residues MEKTEALTLLKQHVATPSLVGHCISTAAVMRGLAAELGQDAVLWETIGILHDIDFEEIDEDMEKHGLAGYEILRAAGVGD EIALPIKRHNHMIFGTDYTTPVEICLQVADSVSGLIVACAYVKGGNISDVTVKTVTKKYKTPSFAAGCDRTRIALGDALI PRERMYEIAISEITAVKDELGLN
Specific function: Unknown
COG id: COG2316
COG function: function code R; Predicted hydrolase (HD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19796; Mature: 19796
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKTEALTLLKQHVATPSLVGHCISTAAVMRGLAAELGQDAVLWETIGILHDIDFEEIDE CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHH DMEKHGLAGYEILRAAGVGDEIALPIKRHNHMIFGTDYTTPVEICLQVADSVSGLIVACA HHHHCCCHHHHHHHHCCCCCCEEEEHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHEE YVKGGNISDVTVKTVTKKYKTPSFAAGCDRTRIALGDALIPRERMYEIAISEITAVKDEL HHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHCCHHHHHHHHHHHHHHHHHHH GLN CCC >Mature Secondary Structure MEKTEALTLLKQHVATPSLVGHCISTAAVMRGLAAELGQDAVLWETIGILHDIDFEEIDE CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHH DMEKHGLAGYEILRAAGVGDEIALPIKRHNHMIFGTDYTTPVEICLQVADSVSGLIVACA HHHHCCCHHHHHHHHCCCCCCEEEEHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHEE YVKGGNISDVTVKTVTKKYKTPSFAAGCDRTRIALGDALIPRERMYEIAISEITAVKDEL HHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHCCHHHHHHHHHHHHHHHHHHH GLN CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA