Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485950

Identifier: 124485950

GI number: 124485950

Start: 1143840

End: 1144217

Strand: Reverse

Name: 124485950

Synonym: Mlab_1130

Alternate gene names: NA

Gene position: 1144217-1143840 (Counterclockwise)

Preceding gene: 124485951

Following gene: 124485949

Centisome position: 63.39

GC content: 32.54

Gene sequence:

>378_bases
ATGTGGACAAAAGAGTTCGGAAAGTATTTTGCAGTTGTTAAAGCAAAAAGTTTTGAGCAGGCTTTAAGTAAAATTAATGA
CCGAATTCTTGTAAATGTCAAATATGCAGTTATTCCAGGCAAAAGGGATGAGTTTCTTGAAAAAGTTGTTGAAAATGATA
TTATTACAGCTTCAAGGGCAGAGCCGGGCAATTACAAATATGAATGCTATAAACCCGTAGATTCAGAAGACATCTTGTTT
TTAATGGAAATTTGGGTAAGCAATAAAGCTCAGACATTACATAGTAAAACAGAACATTATCAACGATTACAGTCATTGAA
AAAAGAGTATGTTACCAATGTAACTATCGAAGAATACAGCATAAACACAATAGTATGA

Upstream 100 bases:

>100_bases
ATGGGGGGTTTCTGAGTTGCTTCCCAATATATCAAAAACTGATTGTGAATACGTTGCATTCATCATGCCAGAGACGGAGG
ATATTCAAGACGAAATGGAT

Downstream 100 bases:

>100_bases
CGTACGTTGGTCTACCCTCTTGTTATGGACACAATGAGCCAAGCGAGAGCAAAAACGAACTTCGAAGTATACCTGGATTA
CCCCCGAAGCGCTAATCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MWTKEFGKYFAVVKAKSFEQALSKINDRILVNVKYAVIPGKRDEFLEKVVENDIITASRAEPGNYKYECYKPVDSEDILF
LMEIWVSNKAQTLHSKTEHYQRLQSLKKEYVTNVTIEEYSINTIV

Sequences:

>Translated_125_residues
MWTKEFGKYFAVVKAKSFEQALSKINDRILVNVKYAVIPGKRDEFLEKVVENDIITASRAEPGNYKYECYKPVDSEDILF
LMEIWVSNKAQTLHSKTEHYQRLQSLKKEYVTNVTIEEYSINTIV
>Mature_125_residues
MWTKEFGKYFAVVKAKSFEQALSKINDRILVNVKYAVIPGKRDEFLEKVVENDIITASRAEPGNYKYECYKPVDSEDILF
LMEIWVSNKAQTLHSKTEHYQRLQSLKKEYVTNVTIEEYSINTIV

Specific function: Unknown

COG id: COG1359

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14647; Mature: 14647

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWTKEFGKYFAVVKAKSFEQALSKINDRILVNVKYAVIPGKRDEFLEKVVENDIITASRA
CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCHHHHHHHHHHCCCEECCCC
EPGNYKYECYKPVDSEDILFLMEIWVSNKAQTLHSKTEHYQRLQSLKKEYVTNVTIEEYS
CCCCCCEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
INTIV
CCCCC
>Mature Secondary Structure
MWTKEFGKYFAVVKAKSFEQALSKINDRILVNVKYAVIPGKRDEFLEKVVENDIITASRA
CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCHHHHHHHHHHCCCEECCCC
EPGNYKYECYKPVDSEDILFLMEIWVSNKAQTLHSKTEHYQRLQSLKKEYVTNVTIEEYS
CCCCCCEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
INTIV
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA