Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485951

Identifier: 124485951

GI number: 124485951

Start: 1144627

End: 1145166

Strand: Reverse

Name: 124485951

Synonym: Mlab_1131

Alternate gene names: NA

Gene position: 1145166-1144627 (Counterclockwise)

Preceding gene: 124485952

Following gene: 124485950

Centisome position: 63.45

GC content: 37.59

Gene sequence:

>540_bases
ATGAGCAATATTGCAGTAATTGTTGGAAGCGTTAGAAAAAACGGGAATACAGAAATATTAGCGAAGGCCTTTGTTGATGG
GGCAAAGAAAAATAATAACGTGGAAATTATTTCCGTTGCCGATTATACGGTACATCCATGCATTGGTTGTAATGCTTGTT
TTTCGAGAGAGGGGAATACATGTTTTCAGGATGATGATATGCCGAAAATTTATGAAATATTGAGAGAAGCAGACATCATC
ATTATTGCATCTCCGGTCTATTTTTACGGAATCAGCGCACAATTAAAGGCAATCGTTGACCGCTTACATTCGCCTTTAAG
AAAAACGTTTAACGTTAAAAAATTAGGATTATTATTAGTTGCAGGGGAAACACTTCCGGCAGTATTTGATTCGATAGAAT
TGCAGTATCAATTAATTTTAGATTATTTCAATCTCCAGGATGCGGGAAGGGTTGTTGCAAAAGGCTTAAAAAATAAAGGC
GACATCAAGGGAAATCAGGCGCTGGCAGAAGCTTTGAAGTTAGGCGAACACATTCGATGA

Upstream 100 bases:

>100_bases
AAAAATTAGTCAAAACGATTCGGCTCAAAGAAAAAATACAGAATATTGTGAATATAAAAAATGAGCAGATAAACTAAAAC
AACATATTAAAGAGGAAAAC

Downstream 100 bases:

>100_bases
AAAATAAATTTTTCGTGCGATTTAATTCCCGTTATGATCAAAATGATAAATAAAACATGCGAACGTGTATGTAATTACTA
ATGATGGAGGAGTATGTATG

Product: hypothetical protein

Products: NA

Alternate protein names: Isf-2; MCJ-2; Mj2 [H]

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MSNIAVIVGSVRKNGNTEILAKAFVDGAKKNNNVEIISVADYTVHPCIGCNACFSREGNTCFQDDDMPKIYEILREADII
IIASPVYFYGISAQLKAIVDRLHSPLRKTFNVKKLGLLLVAGETLPAVFDSIELQYQLILDYFNLQDAGRVVAKGLKNKG
DIKGNQALAEALKLGEHIR

Sequences:

>Translated_179_residues
MSNIAVIVGSVRKNGNTEILAKAFVDGAKKNNNVEIISVADYTVHPCIGCNACFSREGNTCFQDDDMPKIYEILREADII
IIASPVYFYGISAQLKAIVDRLHSPLRKTFNVKKLGLLLVAGETLPAVFDSIELQYQLILDYFNLQDAGRVVAKGLKNKG
DIKGNQALAEALKLGEHIR
>Mature_178_residues
SNIAVIVGSVRKNGNTEILAKAFVDGAKKNNNVEIISVADYTVHPCIGCNACFSREGNTCFQDDDMPKIYEILREADIII
IASPVYFYGISAQLKAIVDRLHSPLRKTFNVKKLGLLLVAGETLPAVFDSIELQYQLILDYFNLQDAGRVVAKGLKNKGD
IKGNQALAEALKLGEHIR

Specific function: Redox-active protein probably involved in electron transport [H]

COG id: COG0655

COG function: function code R; Multimeric flavodoxin WrbA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ssuE family. Isf subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005025 [H]

Pfam domain/function: PF03358 FMN_red [H]

EC number: NA

Molecular weight: Translated: 19667; Mature: 19536

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNIAVIVGSVRKNGNTEILAKAFVDGAKKNNNVEIISVADYTVHPCIGCNACFSREGNT
CCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCEECCCCCCCHHHCCCCCC
CFQDDDMPKIYEILREADIIIIASPVYFYGISAQLKAIVDRLHSPLRKTFNVKKLGLLLV
CCCCCCCHHHHHHHHHCCEEEEECCHHEECHHHHHHHHHHHHHHHHHHHCCHHHHEEEEE
AGETLPAVFDSIELQYQLILDYFNLQDAGRVVAKGLKNKGDIKGNQALAEALKLGEHIR
ECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SNIAVIVGSVRKNGNTEILAKAFVDGAKKNNNVEIISVADYTVHPCIGCNACFSREGNT
CCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCEECCCCCCCHHHCCCCCC
CFQDDDMPKIYEILREADIIIIASPVYFYGISAQLKAIVDRLHSPLRKTFNVKKLGLLLV
CCCCCCCHHHHHHHHHCCEEEEECCHHEECHHHHHHHHHHHHHHHHHHHCCHHHHEEEEE
AGETLPAVFDSIELQYQLILDYFNLQDAGRVVAKGLKNKGDIKGNQALAEALKLGEHIR
ECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]