| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485951
Identifier: 124485951
GI number: 124485951
Start: 1144627
End: 1145166
Strand: Reverse
Name: 124485951
Synonym: Mlab_1131
Alternate gene names: NA
Gene position: 1145166-1144627 (Counterclockwise)
Preceding gene: 124485952
Following gene: 124485950
Centisome position: 63.45
GC content: 37.59
Gene sequence:
>540_bases ATGAGCAATATTGCAGTAATTGTTGGAAGCGTTAGAAAAAACGGGAATACAGAAATATTAGCGAAGGCCTTTGTTGATGG GGCAAAGAAAAATAATAACGTGGAAATTATTTCCGTTGCCGATTATACGGTACATCCATGCATTGGTTGTAATGCTTGTT TTTCGAGAGAGGGGAATACATGTTTTCAGGATGATGATATGCCGAAAATTTATGAAATATTGAGAGAAGCAGACATCATC ATTATTGCATCTCCGGTCTATTTTTACGGAATCAGCGCACAATTAAAGGCAATCGTTGACCGCTTACATTCGCCTTTAAG AAAAACGTTTAACGTTAAAAAATTAGGATTATTATTAGTTGCAGGGGAAACACTTCCGGCAGTATTTGATTCGATAGAAT TGCAGTATCAATTAATTTTAGATTATTTCAATCTCCAGGATGCGGGAAGGGTTGTTGCAAAAGGCTTAAAAAATAAAGGC GACATCAAGGGAAATCAGGCGCTGGCAGAAGCTTTGAAGTTAGGCGAACACATTCGATGA
Upstream 100 bases:
>100_bases AAAAATTAGTCAAAACGATTCGGCTCAAAGAAAAAATACAGAATATTGTGAATATAAAAAATGAGCAGATAAACTAAAAC AACATATTAAAGAGGAAAAC
Downstream 100 bases:
>100_bases AAAATAAATTTTTCGTGCGATTTAATTCCCGTTATGATCAAAATGATAAATAAAACATGCGAACGTGTATGTAATTACTA ATGATGGAGGAGTATGTATG
Product: hypothetical protein
Products: NA
Alternate protein names: Isf-2; MCJ-2; Mj2 [H]
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MSNIAVIVGSVRKNGNTEILAKAFVDGAKKNNNVEIISVADYTVHPCIGCNACFSREGNTCFQDDDMPKIYEILREADII IIASPVYFYGISAQLKAIVDRLHSPLRKTFNVKKLGLLLVAGETLPAVFDSIELQYQLILDYFNLQDAGRVVAKGLKNKG DIKGNQALAEALKLGEHIR
Sequences:
>Translated_179_residues MSNIAVIVGSVRKNGNTEILAKAFVDGAKKNNNVEIISVADYTVHPCIGCNACFSREGNTCFQDDDMPKIYEILREADII IIASPVYFYGISAQLKAIVDRLHSPLRKTFNVKKLGLLLVAGETLPAVFDSIELQYQLILDYFNLQDAGRVVAKGLKNKG DIKGNQALAEALKLGEHIR >Mature_178_residues SNIAVIVGSVRKNGNTEILAKAFVDGAKKNNNVEIISVADYTVHPCIGCNACFSREGNTCFQDDDMPKIYEILREADIII IASPVYFYGISAQLKAIVDRLHSPLRKTFNVKKLGLLLVAGETLPAVFDSIELQYQLILDYFNLQDAGRVVAKGLKNKGD IKGNQALAEALKLGEHIR
Specific function: Redox-active protein probably involved in electron transport [H]
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family. Isf subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 19667; Mature: 19536
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNIAVIVGSVRKNGNTEILAKAFVDGAKKNNNVEIISVADYTVHPCIGCNACFSREGNT CCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCEECCCCCCCHHHCCCCCC CFQDDDMPKIYEILREADIIIIASPVYFYGISAQLKAIVDRLHSPLRKTFNVKKLGLLLV CCCCCCCHHHHHHHHHCCEEEEECCHHEECHHHHHHHHHHHHHHHHHHHCCHHHHEEEEE AGETLPAVFDSIELQYQLILDYFNLQDAGRVVAKGLKNKGDIKGNQALAEALKLGEHIR ECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure SNIAVIVGSVRKNGNTEILAKAFVDGAKKNNNVEIISVADYTVHPCIGCNACFSREGNT CCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCEECCCCCCCHHHCCCCCC CFQDDDMPKIYEILREADIIIIASPVYFYGISAQLKAIVDRLHSPLRKTFNVKKLGLLLV CCCCCCCHHHHHHHHHCCEEEEECCHHEECHHHHHHHHHHHHHHHHHHHCCHHHHEEEEE AGETLPAVFDSIELQYQLILDYFNLQDAGRVVAKGLKNKGDIKGNQALAEALKLGEHIR ECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]