| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
Click here to switch to the map view.
The map label for this gene is 124485943
Identifier: 124485943
GI number: 124485943
Start: 1136407
End: 1137138
Strand: Reverse
Name: 124485943
Synonym: Mlab_1123
Alternate gene names: NA
Gene position: 1137138-1136407 (Counterclockwise)
Preceding gene: 124485946
Following gene: 124485941
Centisome position: 63.0
GC content: 49.59
Gene sequence:
>732_bases ATGAAAAAGAATGTAATTGCAATCCTGCTTCTCTTTGCGGTGTTTGCGATCTTTGCTATCCCAGCGGCAGCAGAAGATTC ACAGACCGACAAAGTCATTCTGGTTTCCGGATACGGCGTTTCGACCACAACTCCCGACAAAGTAACGATCAGTTTCGGCG TCGAGACCGAAAACCCTGATGCAAAAATCGCCCAGAGCGAAAATGCAGCACTGATGGAAAAAGTAGTTGCCGCCCTCAAA AATGCCGGCATCAAAGACTCCAACATCCAGACGACCGGTTACAACATCTACTCCTATGTCATTGGAGATTATAATCCAGG TAAATGGGCAAATGGAACTACTGTCTACAAAGTAACTAACACCGTGCAGATCATCTCCTATGATGTCGATCAGGCCGGTT CATACATCGATGCCGCGGTCTCTGCCGGAGCAAACAGTGTGAACAGTCTTCAGTTCGGTCTTTCCGACGAAAAACTGATC ATTGAAAGAAACGCCGCGATCCTCTCGGCTGTCAAGTCGGCACGTGCCGATGCGGATTCAGTCTCTTCAGCACTCGGTCT GAAGATCGCCGGTACAGGCACCATCAATGTAGGTCAGAGCTACACCCCGGTCTCCTACACGAACATGGATGTTGTCAGCT ACGCAAAGGCTGAAGCAAGCGGAGTCCGCACCACCATCGAATCAGGCGAGATCAAAACGACTGCAACGGTTTCGATCGTG TACACCTACTAA
Upstream 100 bases:
>100_bases AAAACACCAAGCGCGCAGATGGGCACGTAATAATTACAATAATTTTCGTAGTTTTGGATAGGTATATGTCAATCCAGGGA CTATTACTGTAGTGATACAT
Downstream 100 bases:
>100_bases AATCTGCAGAGAAAAATCTCTGCCGCCCCTTTTTTTATGAATATTTAATTGCCGGTCAGTTCCCTGATCACGGCAATAAA TGTGTTCACTTCGCTTTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MKKNVIAILLLFAVFAIFAIPAAAEDSQTDKVILVSGYGVSTTTPDKVTISFGVETENPDAKIAQSENAALMEKVVAALK NAGIKDSNIQTTGYNIYSYVIGDYNPGKWANGTTVYKVTNTVQIISYDVDQAGSYIDAAVSAGANSVNSLQFGLSDEKLI IERNAAILSAVKSARADADSVSSALGLKIAGTGTINVGQSYTPVSYTNMDVVSYAKAEASGVRTTIESGEIKTTATVSIV YTY
Sequences:
>Translated_243_residues MKKNVIAILLLFAVFAIFAIPAAAEDSQTDKVILVSGYGVSTTTPDKVTISFGVETENPDAKIAQSENAALMEKVVAALK NAGIKDSNIQTTGYNIYSYVIGDYNPGKWANGTTVYKVTNTVQIISYDVDQAGSYIDAAVSAGANSVNSLQFGLSDEKLI IERNAAILSAVKSARADADSVSSALGLKIAGTGTINVGQSYTPVSYTNMDVVSYAKAEASGVRTTIESGEIKTTATVSIV YTY >Mature_243_residues MKKNVIAILLLFAVFAIFAIPAAAEDSQTDKVILVSGYGVSTTTPDKVTISFGVETENPDAKIAQSENAALMEKVVAALK NAGIKDSNIQTTGYNIYSYVIGDYNPGKWANGTTVYKVTNTVQIISYDVDQAGSYIDAAVSAGANSVNSLQFGLSDEKLI IERNAAILSAVKSARADADSVSSALGLKIAGTGTINVGQSYTPVSYTNMDVVSYAKAEASGVRTTIESGEIKTTATVSIV YTY
Specific function: Unknown
COG id: COG2968
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25498; Mature: 25498
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNVIAILLLFAVFAIFAIPAAAEDSQTDKVILVSGYGVSTTTPDKVTISFGVETENPD CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCC AKIAQSENAALMEKVVAALKNAGIKDSNIQTTGYNIYSYVIGDYNPGKWANGTTVYKVTN CEEECCCCHHHHHHHHHHHHHCCCCCCCEEECCEEEEEEEEECCCCCCCCCCEEEEEEEC TVQIISYDVDQAGSYIDAAVSAGANSVNSLQFGLSDEKLIIERNAAILSAVKSARADADS EEEEEEECHHHCCCHHHHHHHCCCCCCCEEEECCCCCEEEEECCHHHHHHHHHHCCCHHH VSSALGLKIAGTGTINVGQSYTPVSYTNMDVVSYAKAEASGVRTTIESGEIKTTATVSIV HHHHHCEEEECCCEEECCCCCCCCEECCCHHHHHHHHHCCCCEEEECCCCEEEEEEEEEE YTY EEC >Mature Secondary Structure MKKNVIAILLLFAVFAIFAIPAAAEDSQTDKVILVSGYGVSTTTPDKVTISFGVETENPD CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCC AKIAQSENAALMEKVVAALKNAGIKDSNIQTTGYNIYSYVIGDYNPGKWANGTTVYKVTN CEEECCCCHHHHHHHHHHHHHCCCCCCCEEECCEEEEEEEEECCCCCCCCCCEEEEEEEC TVQIISYDVDQAGSYIDAAVSAGANSVNSLQFGLSDEKLIIERNAAILSAVKSARADADS EEEEEEECHHHCCCHHHHHHHCCCCCCCEEEECCCCCEEEEECCHHHHHHHHHHCCCHHH VSSALGLKIAGTGTINVGQSYTPVSYTNMDVVSYAKAEASGVRTTIESGEIKTTATVSIV HHHHHCEEEECCCEEECCCCCCCCEECCCHHHHHHHHHCCCCEEEECCCCEEEEEEEEEE YTY EEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA