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The map label for this gene is ynbA [C]

Identifier: 124485946

GI number: 124485946

Start: 1140336

End: 1140974

Strand: Reverse

Name: ynbA [C]

Synonym: Mlab_1126

Alternate gene names: 124485946

Gene position: 1140974-1140336 (Counterclockwise)

Preceding gene: 124485947

Following gene: 124485943

Centisome position: 63.21

GC content: 55.87

Gene sequence:

>639_bases
ATGAGTCTTGATTCGCTTCGTCCGAAAGTCCAGTGGATATTAACGCCTATCGCAGAGGCATTTTCAAAGCTTCCGATAAC
GCCGAATATGTGGACCGTTGTCTCGCTTTTCTGCGCACTCATCGCCGGGATATTTTTCGGATTCGGCCTGCCGCTTTTTG
GCGTGCTTTTTGTTGTCCTGAACTCGTTTCTGGATGTTTTAGACGGAGCGCTGGCACGACACACCGGAGCGGCAAGTCCT
ATCGGTGACTATCTGGACCACGTCTTCGACCGGTATGCGGATGTGTTCATCATCACCGGCATCATCGTCTACGGGGTCCA
GACCTGGCAGGCTCCGGTTCCGGCATGGGTGATCGGCCTCTTTGCTATCACCGGCGTTCTGCTTTCCTCCTACATGGGGA
CCCAGGCCCAGGCGGTCGGTCTTAAGCGAAACTACGGCGGGGTCCTCGGTCGTGCCGACCGTCTGGTCCTTCTGATGCTT
TTCGGTCTGGCCGAGGTCATCTATCCGGCTCCGATCCTTTTCGGCCTGCCGTTTTTGGGATGGATGCTTGTCGTGTACGG
CTTCTTCGGGCACATCACGGCGATCCAGCGGTTCGTTATGACGCTCAAAGAACTGCTGAAAGATGCCCGCGCTCAGTAA

Upstream 100 bases:

>100_bases
AGAGAGAGTCTGTGGTCCGGCGTATCATCTCTTTTGCAAAAGGAGAGACTCCCGCATCGTTTGGATCGCTTGACTGGTCA
GAATATATAGCAGATGTCAT

Downstream 100 bases:

>100_bases
AGCAGAAGATATTCCACAGTAATTCGAAATATTATAAAAAAAGTCTGCGGCCGTTGTATTTCGGCCGCACATGTTTCCCA
GTTTCTTTTATTATTGGACG

Product: hypothetical protein

Products: CMP; 3(3-sn-phosphatidyl)-sn-glycerol 1-phosphate

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MSLDSLRPKVQWILTPIAEAFSKLPITPNMWTVVSLFCALIAGIFFGFGLPLFGVLFVVLNSFLDVLDGALARHTGAASP
IGDYLDHVFDRYADVFIITGIIVYGVQTWQAPVPAWVIGLFAITGVLLSSYMGTQAQAVGLKRNYGGVLGRADRLVLLML
FGLAEVIYPAPILFGLPFLGWMLVVYGFFGHITAIQRFVMTLKELLKDARAQ

Sequences:

>Translated_212_residues
MSLDSLRPKVQWILTPIAEAFSKLPITPNMWTVVSLFCALIAGIFFGFGLPLFGVLFVVLNSFLDVLDGALARHTGAASP
IGDYLDHVFDRYADVFIITGIIVYGVQTWQAPVPAWVIGLFAITGVLLSSYMGTQAQAVGLKRNYGGVLGRADRLVLLML
FGLAEVIYPAPILFGLPFLGWMLVVYGFFGHITAIQRFVMTLKELLKDARAQ
>Mature_211_residues
SLDSLRPKVQWILTPIAEAFSKLPITPNMWTVVSLFCALIAGIFFGFGLPLFGVLFVVLNSFLDVLDGALARHTGAASPI
GDYLDHVFDRYADVFIITGIIVYGVQTWQAPVPAWVIGLFAITGVLLSSYMGTQAQAVGLKRNYGGVLGRADRLVLLMLF
GLAEVIYPAPILFGLPFLGWMLVVYGFFGHITAIQRFVMTLKELLKDARAQ

Specific function: Unknown

COG id: COG0558

COG function: function code I; Phosphatidylglycerophosphate synthase

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000462 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: 2.7.8.5

Molecular weight: Translated: 23244; Mature: 23113

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLDSLRPKVQWILTPIAEAFSKLPITPNMWTVVSLFCALIAGIFFGFGLPLFGVLFVVL
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NSFLDVLDGALARHTGAASPIGDYLDHVFDRYADVFIITGIIVYGVQTWQAPVPAWVIGL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
FAITGVLLSSYMGTQAQAVGLKRNYGGVLGRADRLVLLMLFGLAEVIYPAPILFGLPFLG
HHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WMLVVYGFFGHITAIQRFVMTLKELLKDARAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLDSLRPKVQWILTPIAEAFSKLPITPNMWTVVSLFCALIAGIFFGFGLPLFGVLFVVL
CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NSFLDVLDGALARHTGAASPIGDYLDHVFDRYADVFIITGIIVYGVQTWQAPVPAWVIGL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
FAITGVLLSSYMGTQAQAVGLKRNYGGVLGRADRLVLLMLFGLAEVIYPAPILFGLPFLG
HHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WMLVVYGFFGHITAIQRFVMTLKELLKDARAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: CDPdiacylglycerol; sn-glycerol 3-phosphate

Specific reaction: CDP-diacylglycerol + sn-glycerol 3-phosphate = CMP + 3(3-sn-phosphatidyl)-sn-glycerol 1-phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]