Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485860

Identifier: 124485860

GI number: 124485860

Start: 1050590

End: 1051816

Strand: Reverse

Name: 124485860

Synonym: Mlab_1040

Alternate gene names: NA

Gene position: 1051816-1050590 (Counterclockwise)

Preceding gene: 124485861

Following gene: 124485859

Centisome position: 58.27

GC content: 41.56

Gene sequence:

>1227_bases
ATGAATAAACTCTGTTTCTGCTCAACAACCTATGGAGGGTATGGGATCGTAAGGGTCGGTTCGTTAATTCCGGAAAGTTA
TCTATTGTTTGTCTGCCCGCCCTCATGCGGGCGGCACACATCCATCAATGCAATTCAGCAGAAGTATAAAAACAGGATCA
GTTATCTTTTCTTTGATGAGCATGAACTTGCTCTTGGCATGGTCGAAGATGAGCTCTGTAATGCTATCGATGAACTCCTG
CCTCAGATACAACGCCCGAAAGTATTTTTGGTATATATCTGCTGTGTTCTTTATTTAGCAGGATTTGATGAACAAAGCAC
AATTGATGAACTTAAAAAGCGAAATCCCGACATTGTATTTCAAATTTGTCTGATGAATCCGGTGTCTGCAGATACGAAAC
GGCCCCCTGGACTGACTATGCAGGAGAGAATGTATGCATTACTGGATTTCTCTTCATCACAACTGAACACGCTCAATTTT
ATTGGGAATAATGTGCCGATCAATTCCAACAGCGAAATTTATGAGGTACTGAACAAATGTGGGGTTACAGAGACATTGCA
TGTATCTGATCAACCCTCATTTGAAGAGTTTAAACGAATGGGGCGATCAAAATGGAATCTGGTGGTTCGTCCCGAAGCAA
TTCTTGCAGCGAAAAGTCTAAGTTCCCGAATGGATTTTCGCTTTGTTCCGGTCTCTTATGATATTATTCAGATTAGAGAA
CAGTATGAAGAGATATTTTCGATGCTTTCTGCACGATGCTATCTCGAAGCATATGAAAAGCGTGTGCAGGAAGCTATCAA
TAAAGCAAAAGATGCAGTGGGAAAAAAGCCGATCGCCGTCGGAGCATCTGCGGTATGCAGACCATTTAGTCTTGCCCGGT
CATTGATAAATTACGGCTTTGTTGTTACTGACATTTTCGGAAAAGACGTTGTGCCCTTTGAACGCGAAGCATATGAGTGG
ATACGAACGAATGCTCCAAAAATTGTTATCCACGATACGAAAGATCCTGCAATGATAAATAACATTGGAAAATGCGGCAT
TGCAGAAATTGCTGTAGGATATGATGCAGGATATTTCTCTGGTGCTGAAAGTGTGGTAGATCTGCTTGGTGATGAAGGGA
TGTTTGGCTACTATGGGATAGAACTATTGATGAATCTTTTAATTGAGAGTGTATCTCATCCAAAGGATCTGCGCAAAATG
ATCGAAGCATATGGACTGGTGGCATAA

Upstream 100 bases:

>100_bases
AGGCTGAAAATGCTGGTATGACTGTTGTGGAATATGCACCGAATTCATCTCAAGCAGATTTGTATAGAAAACTAGCAGGA
ATTTTACTTGAGGATTAACT

Downstream 100 bases:

>100_bases
ATGAGCAATCTGTTTGTGCACCTGCCGTCATTTGCAACGGATTACTCCGGCGCCGCTTCGGTATTTTATAATATGGGCGG
ACTTGTTGTGATCCATGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MNKLCFCSTTYGGYGIVRVGSLIPESYLLFVCPPSCGRHTSINAIQQKYKNRISYLFFDEHELALGMVEDELCNAIDELL
PQIQRPKVFLVYICCVLYLAGFDEQSTIDELKKRNPDIVFQICLMNPVSADTKRPPGLTMQERMYALLDFSSSQLNTLNF
IGNNVPINSNSEIYEVLNKCGVTETLHVSDQPSFEEFKRMGRSKWNLVVRPEAILAAKSLSSRMDFRFVPVSYDIIQIRE
QYEEIFSMLSARCYLEAYEKRVQEAINKAKDAVGKKPIAVGASAVCRPFSLARSLINYGFVVTDIFGKDVVPFEREAYEW
IRTNAPKIVIHDTKDPAMINNIGKCGIAEIAVGYDAGYFSGAESVVDLLGDEGMFGYYGIELLMNLLIESVSHPKDLRKM
IEAYGLVA

Sequences:

>Translated_408_residues
MNKLCFCSTTYGGYGIVRVGSLIPESYLLFVCPPSCGRHTSINAIQQKYKNRISYLFFDEHELALGMVEDELCNAIDELL
PQIQRPKVFLVYICCVLYLAGFDEQSTIDELKKRNPDIVFQICLMNPVSADTKRPPGLTMQERMYALLDFSSSQLNTLNF
IGNNVPINSNSEIYEVLNKCGVTETLHVSDQPSFEEFKRMGRSKWNLVVRPEAILAAKSLSSRMDFRFVPVSYDIIQIRE
QYEEIFSMLSARCYLEAYEKRVQEAINKAKDAVGKKPIAVGASAVCRPFSLARSLINYGFVVTDIFGKDVVPFEREAYEW
IRTNAPKIVIHDTKDPAMINNIGKCGIAEIAVGYDAGYFSGAESVVDLLGDEGMFGYYGIELLMNLLIESVSHPKDLRKM
IEAYGLVA
>Mature_408_residues
MNKLCFCSTTYGGYGIVRVGSLIPESYLLFVCPPSCGRHTSINAIQQKYKNRISYLFFDEHELALGMVEDELCNAIDELL
PQIQRPKVFLVYICCVLYLAGFDEQSTIDELKKRNPDIVFQICLMNPVSADTKRPPGLTMQERMYALLDFSSSQLNTLNF
IGNNVPINSNSEIYEVLNKCGVTETLHVSDQPSFEEFKRMGRSKWNLVVRPEAILAAKSLSSRMDFRFVPVSYDIIQIRE
QYEEIFSMLSARCYLEAYEKRVQEAINKAKDAVGKKPIAVGASAVCRPFSLARSLINYGFVVTDIFGKDVVPFEREAYEW
IRTNAPKIVIHDTKDPAMINNIGKCGIAEIAVGYDAGYFSGAESVVDLLGDEGMFGYYGIELLMNLLIESVSHPKDLRKM
IEAYGLVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45958; Mature: 45958

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLCFCSTTYGGYGIVRVGSLIPESYLLFVCPPSCGRHTSINAIQQKYKNRISYLFFDE
CCCEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCEEEEECC
HELALGMVEDELCNAIDELLPQIQRPKVFLVYICCVLYLAGFDEQSTIDELKKRNPDIVF
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEE
QICLMNPVSADTKRPPGLTMQERMYALLDFSSSQLNTLNFIGNNVPINSNSEIYEVLNKC
EEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHC
GVTETLHVSDQPSFEEFKRMGRSKWNLVVRPEAILAAKSLSSRMDFRFVPVSYDIIQIRE
CCCEEEECCCCCCHHHHHHCCCCCCCEEECCHHHHHHHHHHHCCCEEEECCCHHHHHHHH
QYEEIFSMLSARCYLEAYEKRVQEAINKAKDAVGKKPIAVGASAVCRPFSLARSLINYGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHCCC
VVTDIFGKDVVPFEREAYEWIRTNAPKIVIHDTKDPAMINNIGKCGIAEIAVGYDAGYFS
CEEECCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHCCCCCCHHHHEECCCCCCCC
GAESVVDLLGDEGMFGYYGIELLMNLLIESVSHPKDLRKMIEAYGLVA
CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNKLCFCSTTYGGYGIVRVGSLIPESYLLFVCPPSCGRHTSINAIQQKYKNRISYLFFDE
CCCEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCEEEEECC
HELALGMVEDELCNAIDELLPQIQRPKVFLVYICCVLYLAGFDEQSTIDELKKRNPDIVF
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEE
QICLMNPVSADTKRPPGLTMQERMYALLDFSSSQLNTLNFIGNNVPINSNSEIYEVLNKC
EEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHC
GVTETLHVSDQPSFEEFKRMGRSKWNLVVRPEAILAAKSLSSRMDFRFVPVSYDIIQIRE
CCCEEEECCCCCCHHHHHHCCCCCCCEEECCHHHHHHHHHHHCCCEEEECCCHHHHHHHH
QYEEIFSMLSARCYLEAYEKRVQEAINKAKDAVGKKPIAVGASAVCRPFSLARSLINYGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHCCC
VVTDIFGKDVVPFEREAYEWIRTNAPKIVIHDTKDPAMINNIGKCGIAEIAVGYDAGYFS
CEEECCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHCCCCCCHHHHEECCCCCCCC
GAESVVDLLGDEGMFGYYGIELLMNLLIESVSHPKDLRKMIEAYGLVA
CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA